RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 NSD2O96028 1365 aa17.02■□□□□ 0.32
UBE3B-209ENST00000539584 IGHDP01880 384 aa17.02■□□□□ 0.32
UBE3B-209ENST00000539584 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
UBE3B-209ENST00000539584 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-209ENST00000539584 CFAP53Q96M91 514 aa17.01■□□□□ 0.31
UBE3B-209ENST00000539584 C14orf93Q9H972 538 aaKnown RBP17.01■□□□□ 0.31
UBE3B-209ENST00000539584 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
UBE3B-209ENST00000539584 SLC4A3P48751 1232 aa17■□□□□ 0.31
UBE3B-209ENST00000539584 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
UBE3B-209ENST00000539584 SHPRHQ149N8 1683 aa16.99■□□□□ 0.31
UBE3B-209ENST00000539584 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
UBE3B-209ENST00000539584 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
UBE3B-209ENST00000539584 USP19O94966 1318 aa16.98■□□□□ 0.31
UBE3B-209ENST00000539584 MYH16Q9H6N6 1097 aa16.98■□□□□ 0.31
UBE3B-209ENST00000539584 PPRC1Q5VV67 1664 aaKnown RBP16.98■□□□□ 0.31
UBE3B-209ENST00000539584 ZNF518AQ6AHZ1 1483 aa16.98■□□□□ 0.31
UBE3B-209ENST00000539584 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
UBE3B-209ENST00000539584 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
UBE3B-209ENST00000539584 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
UBE3B-209ENST00000539584 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-209ENST00000539584 COG6Q9Y2V7 657 aa16.97■□□□□ 0.31
UBE3B-209ENST00000539584 NOS1P29475 1434 aa16.97■□□□□ 0.31
UBE3B-209ENST00000539584 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
UBE3B-209ENST00000539584 RWDD1Q9H446 243 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-209ENST00000539584 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
UBE3B-209ENST00000539584 ADGRB1O14514 1584 aa16.96■□□□□ 0.31
UBE3B-209ENST00000539584 PANK1Q8TE04 598 aa16.95■□□□□ 0.3
UBE3B-209ENST00000539584 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
UBE3B-209ENST00000539584 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
UBE3B-209ENST00000539584 PPLO60437 1756 aa16.93■□□□□ 0.3
UBE3B-209ENST00000539584 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
UBE3B-209ENST00000539584 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
UBE3B-209ENST00000539584 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
UBE3B-209ENST00000539584 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
UBE3B-209ENST00000539584 MTHFSP49914 203 aa16.91■□□□□ 0.3
UBE3B-209ENST00000539584 TBC1D32Q96NH3 1257 aa16.91■□□□□ 0.3
UBE3B-209ENST00000539584 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
UBE3B-209ENST00000539584 NPATQ14207 1427 aa16.9■□□□□ 0.3
UBE3B-209ENST00000539584 TRAK1Q9UPV9 953 aa16.9■□□□□ 0.3
UBE3B-209ENST00000539584 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
UBE3B-209ENST00000539584 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
UBE3B-209ENST00000539584 CFAP74Q9C0B2 1584 aa16.9■□□□□ 0.3
UBE3B-209ENST00000539584 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
UBE3B-209ENST00000539584 ZKSCAN2Q63HK3 967 aa16.89■□□□□ 0.29
UBE3B-209ENST00000539584 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
UBE3B-209ENST00000539584 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-209ENST00000539584 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
UBE3B-209ENST00000539584 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
UBE3B-209ENST00000539584 IL16Q14005 1332 aa16.87■□□□□ 0.29
UBE3B-209ENST00000539584 SEC24BO95487 1268 aa16.86■□□□□ 0.29
UBE3B-209ENST00000539584 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
UBE3B-209ENST00000539584 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
UBE3B-209ENST00000539584 ANTXR1Q9H6X2 564 aa16.86■□□□□ 0.29
UBE3B-209ENST00000539584 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
UBE3B-209ENST00000539584 HECW2Q9P2P5 1572 aa16.85■□□□□ 0.29
UBE3B-209ENST00000539584 RLBP1P12271 317 aa16.85■□□□□ 0.29
UBE3B-209ENST00000539584 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-209ENST00000539584 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
UBE3B-209ENST00000539584 DZIP1LQ8IYY4 767 aaKnown RBP16.85■□□□□ 0.29
UBE3B-209ENST00000539584 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
UBE3B-209ENST00000539584 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
UBE3B-209ENST00000539584 CHGAP10645 457 aaKnown RBP16.84■□□□□ 0.29
UBE3B-209ENST00000539584 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
UBE3B-209ENST00000539584 GLI2P10070 1586 aa16.84■□□□□ 0.29
UBE3B-209ENST00000539584 MED14O60244 1454 aa16.84■□□□□ 0.29
UBE3B-209ENST00000539584 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
UBE3B-209ENST00000539584 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
UBE3B-209ENST00000539584 DDX19BQ9UMR2 479 aa16.84■□□□□ 0.29
UBE3B-209ENST00000539584 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-209ENST00000539584 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBE3B-209ENST00000539584 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
UBE3B-209ENST00000539584 ABCC3O15438 1527 aa16.82■□□□□ 0.28
UBE3B-209ENST00000539584 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-209ENST00000539584 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
UBE3B-209ENST00000539584 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
UBE3B-209ENST00000539584 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
UBE3B-209ENST00000539584 FRMPD1Q5SYB0 1578 aa16.8■□□□□ 0.28
UBE3B-209ENST00000539584 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
UBE3B-209ENST00000539584 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
UBE3B-209ENST00000539584 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
UBE3B-209ENST00000539584 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
UBE3B-209ENST00000539584 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
UBE3B-209ENST00000539584 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
UBE3B-209ENST00000539584 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
UBE3B-209ENST00000539584 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
UBE3B-209ENST00000539584 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
UBE3B-209ENST00000539584 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
UBE3B-209ENST00000539584 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
UBE3B-209ENST00000539584 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.28
UBE3B-209ENST00000539584 SMC5Q8IY18 1101 aa16.77■□□□□ 0.28
UBE3B-209ENST00000539584 CHMP4BQ9H444 224 aaKnown RBP16.77■□□□□ 0.28
UBE3B-209ENST00000539584 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.27
UBE3B-209ENST00000539584 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.27
UBE3B-209ENST00000539584 SMC4Q9NTJ3 1288 aa16.77■□□□□ 0.27
UBE3B-209ENST00000539584 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
UBE3B-209ENST00000539584 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
UBE3B-209ENST00000539584 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
UBE3B-209ENST00000539584 TERF2IPQ9NYB0 399 aa16.76■□□□□ 0.27
UBE3B-209ENST00000539584 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBE3B-209ENST00000539584 BRPF1P55201 1214 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms