RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 RGS12O14924 1447 aa16.28■□□□□ 0.2
DDB1-214ENST00000539426 TECPR2O15040 1411 aa16.28■□□□□ 0.2
DDB1-214ENST00000539426 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
DDB1-214ENST00000539426 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
DDB1-214ENST00000539426 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.2
DDB1-214ENST00000539426 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.2
DDB1-214ENST00000539426 QTRT2Q9H974 415 aaKnown RBP16.27■□□□□ 0.2
DDB1-214ENST00000539426 PIK3C2GO75747 1445 aa16.27■□□□□ 0.19
DDB1-214ENST00000539426 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
DDB1-214ENST00000539426 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
DDB1-214ENST00000539426 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
DDB1-214ENST00000539426 STK26Q9P289 416 aa16.26■□□□□ 0.19
DDB1-214ENST00000539426 PXDNQ92626 1479 aa16.26■□□□□ 0.19
DDB1-214ENST00000539426 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
DDB1-214ENST00000539426 MYOM2P54296 1465 aa16.24■□□□□ 0.19
DDB1-214ENST00000539426 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
DDB1-214ENST00000539426 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
DDB1-214ENST00000539426 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
DDB1-214ENST00000539426 ABCC11Q96J66 1382 aa16.24■□□□□ 0.19
DDB1-214ENST00000539426 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
DDB1-214ENST00000539426 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
DDB1-214ENST00000539426 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
DDB1-214ENST00000539426 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
DDB1-214ENST00000539426 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
DDB1-214ENST00000539426 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
DDB1-214ENST00000539426 FOXO3O43524 673 aa16.21■□□□□ 0.19
DDB1-214ENST00000539426 USP21Q9UK80 565 aa16.2■□□□□ 0.18
DDB1-214ENST00000539426 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
DDB1-214ENST00000539426 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
DDB1-214ENST00000539426 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
DDB1-214ENST00000539426 ATRNO75882 1429 aa16.19■□□□□ 0.18
DDB1-214ENST00000539426 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
DDB1-214ENST00000539426 C14orf93Q9H972 538 aaKnown RBP16.17■□□□□ 0.18
DDB1-214ENST00000539426 TRPC5Q9UL62 973 aaPredicted RBP16.17■□□□□ 0.18
DDB1-214ENST00000539426 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
DDB1-214ENST00000539426 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
DDB1-214ENST00000539426 EP400Q96L91 3159 aa16.16■□□□□ 0.18
DDB1-214ENST00000539426 RAB3GAP2Q9H2M9 1393 aa16.15■□□□□ 0.18
DDB1-214ENST00000539426 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
DDB1-214ENST00000539426 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.13■□□□□ 0.17
DDB1-214ENST00000539426 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
DDB1-214ENST00000539426 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
DDB1-214ENST00000539426 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
DDB1-214ENST00000539426 ATAD2Q6PL18 1390 aa16.12■□□□□ 0.17
DDB1-214ENST00000539426 USP32Q8NFA0 1604 aa16.12■□□□□ 0.17
DDB1-214ENST00000539426 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
DDB1-214ENST00000539426 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
DDB1-214ENST00000539426 SLIT2O94813 1529 aa16.1■□□□□ 0.17
DDB1-214ENST00000539426 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
DDB1-214ENST00000539426 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
DDB1-214ENST00000539426 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
DDB1-214ENST00000539426 TNS3Q68CZ2 1445 aa16.1■□□□□ 0.17
DDB1-214ENST00000539426 SRCAPQ6ZRS2 3230 aa16.09■□□□□ 0.17
DDB1-214ENST00000539426 ABCA3Q99758 1704 aa16.09■□□□□ 0.17
DDB1-214ENST00000539426 PHF8Q9UPP1 1060 aa16.09■□□□□ 0.17
DDB1-214ENST00000539426 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
DDB1-214ENST00000539426 GLI3P10071 1580 aa16.09■□□□□ 0.17
DDB1-214ENST00000539426 GJD4Q96KN9 370 aaPredicted RBP16.07■□□□□ 0.16
DDB1-214ENST00000539426 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
DDB1-214ENST00000539426 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
DDB1-214ENST00000539426 SBNO1A3KN83 1393 aa16.05■□□□□ 0.16
DDB1-214ENST00000539426 UNC5CLQ8IV45 518 aa16.05■□□□□ 0.16
DDB1-214ENST00000539426 CABLES1Q8TDN4 633 aa16.05■□□□□ 0.16
DDB1-214ENST00000539426 POGKQ9P215 609 aa16.05■□□□□ 0.16
DDB1-214ENST00000539426 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
DDB1-214ENST00000539426 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
DDB1-214ENST00000539426 ANKARQ7Z5J8 1434 aa16.04■□□□□ 0.16
DDB1-214ENST00000539426 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
DDB1-214ENST00000539426 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
DDB1-214ENST00000539426 PSME1Q06323 249 aa16.03■□□□□ 0.16
DDB1-214ENST00000539426 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
DDB1-214ENST00000539426 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
DDB1-214ENST00000539426 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
DDB1-214ENST00000539426 KDM2AQ9Y2K7 1162 aa16.03■□□□□ 0.16
DDB1-214ENST00000539426 ALS2Q96Q42 1657 aa16.02■□□□□ 0.15
DDB1-214ENST00000539426 MINK1Q8N4C8 1332 aaPredicted RBP16.01■□□□□ 0.15
DDB1-214ENST00000539426 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
DDB1-214ENST00000539426 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
DDB1-214ENST00000539426 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
DDB1-214ENST00000539426 ARHGEF10O15013 1369 aa16■□□□□ 0.15
DDB1-214ENST00000539426 TULP4Q9NRJ4 1543 aa16■□□□□ 0.15
DDB1-214ENST00000539426 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
DDB1-214ENST00000539426 DCAF11Q8TEB1 546 aa16■□□□□ 0.15
DDB1-214ENST00000539426 NRAPQ86VF7 1730 aa15.99■□□□□ 0.15
DDB1-214ENST00000539426 CRYBG1Q9Y4K1 1723 aa15.98■□□□□ 0.15
DDB1-214ENST00000539426 VPS72Q15906 364 aa15.97■□□□□ 0.15
DDB1-214ENST00000539426 FAM83GA6ND36 823 aa15.96■□□□□ 0.15
DDB1-214ENST00000539426 WASLO00401 505 aaPredicted RBP15.96■□□□□ 0.15
DDB1-214ENST00000539426 SEPT12Q8IYM1 358 aa15.96■□□□□ 0.15
DDB1-214ENST00000539426 EIF3AQ14152 1382 aaKnown RBP15.96■□□□□ 0.15
DDB1-214ENST00000539426 ITSN1Q15811 1721 aa15.95■□□□□ 0.14
DDB1-214ENST00000539426 HRCP23327 699 aa15.95■□□□□ 0.14
DDB1-214ENST00000539426 CCDC125Q86Z20 511 aa15.95■□□□□ 0.14
DDB1-214ENST00000539426 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
DDB1-214ENST00000539426 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
DDB1-214ENST00000539426 ATP7BP35670 1465 aa15.94■□□□□ 0.14
DDB1-214ENST00000539426 COL14A1Q05707 1796 aaKnown RBP15.94■□□□□ 0.14
DDB1-214ENST00000539426 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
DDB1-214ENST00000539426 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
DDB1-214ENST00000539426 ONECUT3O60422 494 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms