RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 FUT2Q10981 343 aa9.81□□□□□ -0.84
LDHC-206ENST00000539369 SLC27A5Q9Y2P5 690 aa9.81□□□□□ -0.84
LDHC-206ENST00000539369 TTC24A2A3L6 582 aaPredicted RBP9.8□□□□□ -0.84
LDHC-206ENST00000539369 TERTO14746 1132 aaKnown RBP9.8□□□□□ -0.84
LDHC-206ENST00000539369 SEMA3EO15041 775 aa9.79□□□□□ -0.84
LDHC-206ENST00000539369 CUX2O14529 1486 aa9.79□□□□□ -0.84
LDHC-206ENST00000539369 FMNL1O95466 1100 aaPredicted RBP9.78□□□□□ -0.84
LDHC-206ENST00000539369 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
LDHC-206ENST00000539369 RSPH4AQ5TD94 716 aa9.78□□□□□ -0.84
LDHC-206ENST00000539369 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
LDHC-206ENST00000539369 WNT7AO00755 349 aa9.77□□□□□ -0.85
LDHC-206ENST00000539369 BRICD5Q6PL45 260 aa9.77□□□□□ -0.85
LDHC-206ENST00000539369 J3QL48 77 aa9.76□□□□□ -0.85
LDHC-206ENST00000539369 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
LDHC-206ENST00000539369 RDH13Q8NBN7 331 aa9.76□□□□□ -0.85
LDHC-206ENST00000539369 SNIP1Q8TAD8 396 aaKnown RBP9.76□□□□□ -0.85
LDHC-206ENST00000539369 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
LDHC-206ENST00000539369 SALL2Q9Y467 1007 aaPredicted RBP9.75□□□□□ -0.85
LDHC-206ENST00000539369 FECHP22830 423 aa9.74□□□□□ -0.85
LDHC-206ENST00000539369 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
LDHC-206ENST00000539369 MRGPRX2Q96LB1 330 aa9.74□□□□□ -0.85
LDHC-206ENST00000539369 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
LDHC-206ENST00000539369 MSS51Q4VC12 460 aa9.73□□□□□ -0.85
LDHC-206ENST00000539369 HPS1Q92902 700 aa9.73□□□□□ -0.85
LDHC-206ENST00000539369 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
LDHC-206ENST00000539369 ZBTB24O43167 697 aaPredicted RBP9.72□□□□□ -0.85
LDHC-206ENST00000539369 GCGRP47871 477 aa9.72□□□□□ -0.85
LDHC-206ENST00000539369 TRIM32Q13049 653 aa9.72□□□□□ -0.85
LDHC-206ENST00000539369 HIC1Q14526 733 aa9.72□□□□□ -0.85
LDHC-206ENST00000539369 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.86
LDHC-206ENST00000539369 SENP2Q9HC62 589 aa9.71□□□□□ -0.86
LDHC-206ENST00000539369 ERCC6Q03468 1493 aa9.71□□□□□ -0.86
LDHC-206ENST00000539369 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
LDHC-206ENST00000539369 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
LDHC-206ENST00000539369 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
LDHC-206ENST00000539369 MMP16P51512 607 aa9.68□□□□□ -0.86
LDHC-206ENST00000539369 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
LDHC-206ENST00000539369 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
LDHC-206ENST00000539369 GPR37O15354 613 aa9.67□□□□□ -0.86
LDHC-206ENST00000539369 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
LDHC-206ENST00000539369 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
LDHC-206ENST00000539369 SKOR1P84550 965 aa9.65□□□□□ -0.86
LDHC-206ENST00000539369 KIFC2Q96AC6 838 aa9.65□□□□□ -0.86
LDHC-206ENST00000539369 GNPATO15228 680 aa9.64□□□□□ -0.87
LDHC-206ENST00000539369 GMPRP36959 345 aa9.64□□□□□ -0.87
LDHC-206ENST00000539369 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
LDHC-206ENST00000539369 DXOO77932 396 aaKnown RBP9.61□□□□□ -0.87
LDHC-206ENST00000539369 RC3H1Q5TC82 1133 aaKnown RBP9.61□□□□□ -0.87
LDHC-206ENST00000539369 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
LDHC-206ENST00000539369 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
LDHC-206ENST00000539369 NXF1Q9UBU9 619 aaKnown RBP9.61□□□□□ -0.87
LDHC-206ENST00000539369 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
LDHC-206ENST00000539369 NESP48681 1621 aa9.6□□□□□ -0.87
LDHC-206ENST00000539369 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
LDHC-206ENST00000539369 ZSCAN1Q8NBB4 408 aa9.58□□□□□ -0.88
LDHC-206ENST00000539369 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
LDHC-206ENST00000539369 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
LDHC-206ENST00000539369 BMP1P13497 986 aa9.57□□□□□ -0.88
LDHC-206ENST00000539369 VEGFBP49765 207 aa9.57□□□□□ -0.88
LDHC-206ENST00000539369 Q3C1V9 767 aa9.57□□□□□ -0.88
LDHC-206ENST00000539369 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
LDHC-206ENST00000539369 USB1Q9BQ65 265 aaKnown RBP9.57□□□□□ -0.88
LDHC-206ENST00000539369 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
LDHC-206ENST00000539369 WNT7BP56706 349 aa9.56□□□□□ -0.88
LDHC-206ENST00000539369 HLA-CQ95604 372 aa9.56□□□□□ -0.88
LDHC-206ENST00000539369 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
LDHC-206ENST00000539369 ALDH1A1P00352 501 aa9.55□□□□□ -0.88
LDHC-206ENST00000539369 CCDC24Q8N4L8 307 aa9.55□□□□□ -0.88
LDHC-206ENST00000539369 H3BM21 787 aa9.54□□□□□ -0.88
LDHC-206ENST00000539369 IRF7Q92985 503 aa9.54□□□□□ -0.88
LDHC-206ENST00000539369 SIAH2O43255 324 aa9.53□□□□□ -0.88
LDHC-206ENST00000539369 CD46P15529 392 aa9.53□□□□□ -0.88
LDHC-206ENST00000539369 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
LDHC-206ENST00000539369 NPAS3Q8IXF0 933 aa9.53□□□□□ -0.88
LDHC-206ENST00000539369 THOC2Q8NI27 1593 aaKnown RBP9.53□□□□□ -0.88
LDHC-206ENST00000539369 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
LDHC-206ENST00000539369 CAPN5O15484 640 aaPredicted RBP9.49□□□□□ -0.89
LDHC-206ENST00000539369 KDM4AO75164 1064 aa9.49□□□□□ -0.89
LDHC-206ENST00000539369 PTCRAQ6ISU1 281 aaPredicted RBP9.49□□□□□ -0.89
LDHC-206ENST00000539369 SMARCA2P51531 1590 aa9.49□□□□□ -0.89
LDHC-206ENST00000539369 SMARCA4P51532 1647 aa9.46□□□□□ -0.89
LDHC-206ENST00000539369 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
LDHC-206ENST00000539369 GUCA2AQ02747 115 aa9.46□□□□□ -0.9
LDHC-206ENST00000539369 HOXA2O43364 376 aa9.45□□□□□ -0.9
LDHC-206ENST00000539369 JUNDP17535 347 aa9.45□□□□□ -0.9
LDHC-206ENST00000539369 SUZ12Q15022 739 aaKnown RBP9.45□□□□□ -0.9
LDHC-206ENST00000539369 EHBP1Q8NDI1 1231 aa9.45□□□□□ -0.9
LDHC-206ENST00000539369 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
LDHC-206ENST00000539369 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
LDHC-206ENST00000539369 BAZ1BQ9UIG0 1483 aaKnown RBP9.45□□□□□ -0.9
LDHC-206ENST00000539369 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
LDHC-206ENST00000539369 LAMC3Q9Y6N6 1575 aa9.42□□□□□ -0.9
LDHC-206ENST00000539369 USP46P62068 366 aa9.42□□□□□ -0.9
LDHC-206ENST00000539369 SH3BP2P78314 561 aa9.42□□□□□ -0.9
LDHC-206ENST00000539369 GSK3AP49840 483 aa9.41□□□□□ -0.9
LDHC-206ENST00000539369 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
LDHC-206ENST00000539369 KIF21AQ7Z4S6 1674 aa9.4□□□□□ -0.9
LDHC-206ENST00000539369 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
LDHC-206ENST00000539369 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
LDHC-206ENST00000539369 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms