RNA–Protein interactions for RNA: ENST00000538979.5

SCNN1A-212, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-212ENST00000538979 UPF1Q92900 1129 aaKnown RBP eCLIP21.95■■□□□ 1.1
SCNN1A-212ENST00000538979 SOS2Q07890 1332 aaPredicted RBP21.95■■□□□ 1.1
SCNN1A-212ENST00000538979 LRPPRCP42704 1394 aaKnown RBP21.95■■□□□ 1.1
SCNN1A-212ENST00000538979 KIF1AQ12756 1690 aa21.95■■□□□ 1.1
SCNN1A-212ENST00000538979 QTRT2Q9H974 415 aaKnown RBP21.94■■□□□ 1.1
SCNN1A-212ENST00000538979 ADAMTS2O95450 1211 aa21.93■■□□□ 1.1
SCNN1A-212ENST00000538979 TECPR2O15040 1411 aa21.92■■□□□ 1.1
SCNN1A-212ENST00000538979 ORAI2Q96SN7 254 aa21.92■■□□□ 1.1
SCNN1A-212ENST00000538979 ESCO1Q5FWF5 840 aa21.91■■□□□ 1.1
SCNN1A-212ENST00000538979 RGS12O14924 1447 aa21.9■■□□□ 1.1
SCNN1A-212ENST00000538979 FMN2Q9NZ56 1722 aa21.9■■□□□ 1.1
SCNN1A-212ENST00000538979 SPATA31E1Q6ZUB1 1445 aa21.89■■□□□ 1.1
SCNN1A-212ENST00000538979 RGL3Q3MIN7 710 aa21.89■■□□□ 1.09
SCNN1A-212ENST00000538979 FOXD1Q16676 465 aa21.88■■□□□ 1.09
SCNN1A-212ENST00000538979 MPHOSPH9Q99550 1183 aa21.88■■□□□ 1.09
SCNN1A-212ENST00000538979 USP21Q9UK80 565 aa21.88■■□□□ 1.09
SCNN1A-212ENST00000538979 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
SCNN1A-212ENST00000538979 PIK3C2GO75747 1445 aa21.88■■□□□ 1.09
SCNN1A-212ENST00000538979 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
SCNN1A-212ENST00000538979 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
SCNN1A-212ENST00000538979 PXDNQ92626 1479 aa21.86■■□□□ 1.09
SCNN1A-212ENST00000538979 ABCC11Q96J66 1382 aa21.86■■□□□ 1.09
SCNN1A-212ENST00000538979 STK26Q9P289 416 aa21.85■■□□□ 1.09
SCNN1A-212ENST00000538979 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.85■■□□□ 1.09
SCNN1A-212ENST00000538979 MYOM2P54296 1465 aa21.83■■□□□ 1.09
SCNN1A-212ENST00000538979 YTHDC2Q9H6S0 1430 aaKnown RBP21.82■■□□□ 1.08
SCNN1A-212ENST00000538979 FNBP4Q8N3X1 1017 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-212ENST00000538979 RGPD8O14715 1765 aaPredicted RBP21.8■■□□□ 1.08
SCNN1A-212ENST00000538979 FOXO3O43524 673 aa21.8■■□□□ 1.08
SCNN1A-212ENST00000538979 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
SCNN1A-212ENST00000538979 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
SCNN1A-212ENST00000538979 ATRNO75882 1429 aa21.78■■□□□ 1.08
SCNN1A-212ENST00000538979 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
SCNN1A-212ENST00000538979 USP32Q8NFA0 1604 aa21.77■■□□□ 1.07
SCNN1A-212ENST00000538979 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
SCNN1A-212ENST00000538979 SIRT1Q96EB6 747 aa21.76■■□□□ 1.07
SCNN1A-212ENST00000538979 HAP1P54257 671 aaPredicted RBP21.75■■□□□ 1.07
SCNN1A-212ENST00000538979 NRXN1Q9ULB1 1477 aa21.75■■□□□ 1.07
SCNN1A-212ENST00000538979 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
SCNN1A-212ENST00000538979 PSME1Q06323 249 aa21.74■■□□□ 1.07
SCNN1A-212ENST00000538979 NWD2Q9ULI1 1742 aa21.73■■□□□ 1.07
SCNN1A-212ENST00000538979 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
SCNN1A-212ENST00000538979 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
SCNN1A-212ENST00000538979 C14orf93Q9H972 538 aaKnown RBP21.72■■□□□ 1.07
SCNN1A-212ENST00000538979 BCL9LQ86UU0 1499 aa21.71■■□□□ 1.07
SCNN1A-212ENST00000538979 SPATA31A3Q5VYP0 1347 aa21.71■■□□□ 1.07
SCNN1A-212ENST00000538979 TNS3Q68CZ2 1445 aa21.71■■□□□ 1.07
SCNN1A-212ENST00000538979 ADGRB2O60241 1585 aa21.7■■□□□ 1.06
SCNN1A-212ENST00000538979 PLCH1Q4KWH8 1693 aa21.7■■□□□ 1.06
SCNN1A-212ENST00000538979 ABCA3Q99758 1704 aa21.7■■□□□ 1.06
SCNN1A-212ENST00000538979 CCDC125Q86Z20 511 aa21.7■■□□□ 1.06
SCNN1A-212ENST00000538979 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.06
SCNN1A-212ENST00000538979 ARHGEF10O15013 1369 aa21.69■■□□□ 1.06
SCNN1A-212ENST00000538979 KRT28Q7Z3Y7 464 aa21.68■■□□□ 1.06
SCNN1A-212ENST00000538979 GJD4Q96KN9 370 aaPredicted RBP21.68■■□□□ 1.06
SCNN1A-212ENST00000538979 POGKQ9P215 609 aa21.68■■□□□ 1.06
SCNN1A-212ENST00000538979 PHF8Q9UPP1 1060 aa21.68■■□□□ 1.06
SCNN1A-212ENST00000538979 ANKARQ7Z5J8 1434 aa21.68■■□□□ 1.06
SCNN1A-212ENST00000538979 ITSN1Q15811 1721 aa21.66■■□□□ 1.06
SCNN1A-212ENST00000538979 SLIT2O94813 1529 aa21.66■■□□□ 1.06
SCNN1A-212ENST00000538979 RAB3GAP2Q9H2M9 1393 aa21.66■■□□□ 1.06
SCNN1A-212ENST00000538979 UNC5CLQ8IV45 518 aa21.66■■□□□ 1.06
SCNN1A-212ENST00000538979 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
SCNN1A-212ENST00000538979 CFAP70Q5T0N1 1121 aa21.65■■□□□ 1.06
SCNN1A-212ENST00000538979 PRAM1Q96QH2 718 aa21.65■■□□□ 1.06
SCNN1A-212ENST00000538979 GLI3P10071 1580 aa21.63■■□□□ 1.05
SCNN1A-212ENST00000538979 STAC3Q96MF2 364 aa21.63■■□□□ 1.05
SCNN1A-212ENST00000538979 RALGAPBQ86X10 1494 aa21.63■■□□□ 1.05
SCNN1A-212ENST00000538979 BRWD3Q6RI45 1802 aa21.62■■□□□ 1.05
SCNN1A-212ENST00000538979 LMOD2Q6P5Q4 547 aa21.62■■□□□ 1.05
SCNN1A-212ENST00000538979 ZRANB1Q9UGI0 708 aa21.62■■□□□ 1.05
SCNN1A-212ENST00000538979 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
SCNN1A-212ENST00000538979 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
SCNN1A-212ENST00000538979 EP400Q96L91 3159 aa21.6■■□□□ 1.05
SCNN1A-212ENST00000538979 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
SCNN1A-212ENST00000538979 TRPM3Q9HCF6 1732 aaPredicted RBP21.59■■□□□ 1.05
SCNN1A-212ENST00000538979 TULP4Q9NRJ4 1543 aa21.59■■□□□ 1.05
SCNN1A-212ENST00000538979 SF3B2Q13435 895 aaKnown RBP21.58■■□□□ 1.05
SCNN1A-212ENST00000538979 CCDC9Q9Y3X0 531 aaKnown RBP21.58■■□□□ 1.05
SCNN1A-212ENST00000538979 ALS2Q96Q42 1657 aa21.57■■□□□ 1.04
SCNN1A-212ENST00000538979 BLMP54132 1417 aaPredicted RBP21.57■■□□□ 1.04
SCNN1A-212ENST00000538979 COL14A1Q05707 1796 aaKnown RBP21.57■■□□□ 1.04
SCNN1A-212ENST00000538979 ARHGEF28Q8N1W1 1705 aaKnown RBP21.57■■□□□ 1.04
SCNN1A-212ENST00000538979 VPS72Q15906 364 aa21.55■■□□□ 1.04
SCNN1A-212ENST00000538979 DCAF11Q8TEB1 546 aa21.54■■□□□ 1.04
SCNN1A-212ENST00000538979 TRAK1Q9UPV9 953 aa21.54■■□□□ 1.04
SCNN1A-212ENST00000538979 NRAPQ86VF7 1730 aa21.54■■□□□ 1.04
SCNN1A-212ENST00000538979 PLEKHG5O94827 1062 aa21.53■■□□□ 1.04
SCNN1A-212ENST00000538979 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
SCNN1A-212ENST00000538979 CABLES1Q8TDN4 633 aa21.52■■□□□ 1.04
SCNN1A-212ENST00000538979 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
SCNN1A-212ENST00000538979 A0A0G2JS52 829 aa21.51■■□□□ 1.03
SCNN1A-212ENST00000538979 MYT1Q01538 1121 aa21.51■■□□□ 1.03
SCNN1A-212ENST00000538979 KIAA1210Q9ULL0 1709 aa21.51■■□□□ 1.03
SCNN1A-212ENST00000538979 MINK1Q8N4C8 1332 aaPredicted RBP21.51■■□□□ 1.03
SCNN1A-212ENST00000538979 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
SCNN1A-212ENST00000538979 CRYBG1Q9Y4K1 1723 aa21.49■■□□□ 1.03
SCNN1A-212ENST00000538979 SEPT12Q8IYM1 358 aa21.49■■□□□ 1.03
SCNN1A-212ENST00000538979 NGDNQ8NEJ9 315 aaKnown RBP21.49■■□□□ 1.03
SCNN1A-212ENST00000538979 WASLO00401 505 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms