RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ADGRF5Q8IZF2 1346 aa18.7■□□□□ 0.58
VAMP1-206ENST00000538970 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
VAMP1-206ENST00000538970 TECPR2O15040 1411 aa18.68■□□□□ 0.58
VAMP1-206ENST00000538970 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
VAMP1-206ENST00000538970 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
VAMP1-206ENST00000538970 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
VAMP1-206ENST00000538970 ORAI2Q96SN7 254 aa18.66■□□□□ 0.58
VAMP1-206ENST00000538970 ZRANB1Q9UGI0 708 aa18.66■□□□□ 0.58
VAMP1-206ENST00000538970 SOS2Q07890 1332 aaPredicted RBP18.65■□□□□ 0.58
VAMP1-206ENST00000538970 KNDC1Q76NI1 1749 aa18.64■□□□□ 0.57
VAMP1-206ENST00000538970 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
VAMP1-206ENST00000538970 LRPPRCP42704 1394 aaKnown RBP18.64■□□□□ 0.57
VAMP1-206ENST00000538970 EP400Q96L91 3159 aa18.63■□□□□ 0.57
VAMP1-206ENST00000538970 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
VAMP1-206ENST00000538970 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
VAMP1-206ENST00000538970 ABCC11Q96J66 1382 aa18.61■□□□□ 0.57
VAMP1-206ENST00000538970 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
VAMP1-206ENST00000538970 STK26Q9P289 416 aa18.6■□□□□ 0.57
VAMP1-206ENST00000538970 MYOM2P54296 1465 aa18.59■□□□□ 0.57
VAMP1-206ENST00000538970 NRXN1Q9ULB1 1477 aa18.59■□□□□ 0.57
VAMP1-206ENST00000538970 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
VAMP1-206ENST00000538970 PXDNQ92626 1479 aa18.58■□□□□ 0.57
VAMP1-206ENST00000538970 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
VAMP1-206ENST00000538970 TMEM132EQ6IEE7 984 aa18.58■□□□□ 0.56
VAMP1-206ENST00000538970 WAPLQ7Z5K2 1190 aa18.58■□□□□ 0.56
VAMP1-206ENST00000538970 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
VAMP1-206ENST00000538970 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
VAMP1-206ENST00000538970 ESCO1Q5FWF5 840 aa18.57■□□□□ 0.56
VAMP1-206ENST00000538970 USP21Q9UK80 565 aa18.57■□□□□ 0.56
VAMP1-206ENST00000538970 FMN2Q9NZ56 1722 aa18.55■□□□□ 0.56
VAMP1-206ENST00000538970 TRPC5Q9UL62 973 aaPredicted RBP18.54■□□□□ 0.56
VAMP1-206ENST00000538970 ATRNO75882 1429 aa18.54■□□□□ 0.56
VAMP1-206ENST00000538970 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
VAMP1-206ENST00000538970 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
VAMP1-206ENST00000538970 FOXO3O43524 673 aa18.52■□□□□ 0.56
VAMP1-206ENST00000538970 KIF1AQ12756 1690 aa18.52■□□□□ 0.56
VAMP1-206ENST00000538970 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
VAMP1-206ENST00000538970 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
VAMP1-206ENST00000538970 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
VAMP1-206ENST00000538970 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
VAMP1-206ENST00000538970 DHX57Q6P158 1386 aaKnown RBP18.5■□□□□ 0.55
VAMP1-206ENST00000538970 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
VAMP1-206ENST00000538970 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
VAMP1-206ENST00000538970 CCDC125Q86Z20 511 aa18.47■□□□□ 0.55
VAMP1-206ENST00000538970 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
VAMP1-206ENST00000538970 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.54
VAMP1-206ENST00000538970 ADGRB2O60241 1585 aa18.44■□□□□ 0.54
VAMP1-206ENST00000538970 DEFB132Q7Z7B7 95 aa18.44■□□□□ 0.54
VAMP1-206ENST00000538970 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
VAMP1-206ENST00000538970 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
VAMP1-206ENST00000538970 LRP5O75197 1615 aa18.43■□□□□ 0.54
VAMP1-206ENST00000538970 TNS3Q68CZ2 1445 aa18.41■□□□□ 0.54
VAMP1-206ENST00000538970 RGPD8O14715 1765 aaPredicted RBP18.41■□□□□ 0.54
VAMP1-206ENST00000538970 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
VAMP1-206ENST00000538970 KRT28Q7Z3Y7 464 aa18.41■□□□□ 0.54
VAMP1-206ENST00000538970 PHF8Q9UPP1 1060 aa18.41■□□□□ 0.54
VAMP1-206ENST00000538970 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
VAMP1-206ENST00000538970 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
VAMP1-206ENST00000538970 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
VAMP1-206ENST00000538970 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
VAMP1-206ENST00000538970 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.4■□□□□ 0.54
VAMP1-206ENST00000538970 HRCP23327 699 aa18.39■□□□□ 0.53
VAMP1-206ENST00000538970 POGKQ9P215 609 aa18.39■□□□□ 0.53
VAMP1-206ENST00000538970 SLIT2O94813 1529 aa18.39■□□□□ 0.53
VAMP1-206ENST00000538970 GLI3P10071 1580 aa18.38■□□□□ 0.53
VAMP1-206ENST00000538970 SBNO1A3KN83 1393 aa18.38■□□□□ 0.53
VAMP1-206ENST00000538970 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
VAMP1-206ENST00000538970 PSME1Q06323 249 aa18.36■□□□□ 0.53
VAMP1-206ENST00000538970 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
VAMP1-206ENST00000538970 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
VAMP1-206ENST00000538970 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
VAMP1-206ENST00000538970 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
VAMP1-206ENST00000538970 RALGAPBQ86X10 1494 aa18.35■□□□□ 0.53
VAMP1-206ENST00000538970 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
VAMP1-206ENST00000538970 TULP4Q9NRJ4 1543 aa18.34■□□□□ 0.53
VAMP1-206ENST00000538970 ARHGEF10O15013 1369 aa18.34■□□□□ 0.53
VAMP1-206ENST00000538970 PSDA5PKW4 1024 aaPredicted RBP18.34■□□□□ 0.53
VAMP1-206ENST00000538970 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
VAMP1-206ENST00000538970 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.52
VAMP1-206ENST00000538970 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
VAMP1-206ENST00000538970 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
VAMP1-206ENST00000538970 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
VAMP1-206ENST00000538970 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
VAMP1-206ENST00000538970 PMFBP1Q8TBY8 1022 aa18.32■□□□□ 0.52
VAMP1-206ENST00000538970 ARHGEF28Q8N1W1 1705 aaKnown RBP18.32■□□□□ 0.52
VAMP1-206ENST00000538970 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
VAMP1-206ENST00000538970 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
VAMP1-206ENST00000538970 HAP1P54257 671 aaPredicted RBP18.3■□□□□ 0.52
VAMP1-206ENST00000538970 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
VAMP1-206ENST00000538970 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-206ENST00000538970 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
VAMP1-206ENST00000538970 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
VAMP1-206ENST00000538970 SF3B2Q13435 895 aaKnown RBP18.28■□□□□ 0.52
VAMP1-206ENST00000538970 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
VAMP1-206ENST00000538970 SEPT12Q8IYM1 358 aa18.27■□□□□ 0.52
VAMP1-206ENST00000538970 GPRASP1Q5JY77 1395 aa18.27■□□□□ 0.51
VAMP1-206ENST00000538970 ATP7BP35670 1465 aa18.26■□□□□ 0.51
VAMP1-206ENST00000538970 VPS72Q15906 364 aa18.25■□□□□ 0.51
VAMP1-206ENST00000538970 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
VAMP1-206ENST00000538970 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
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