RNA–Protein interactions for RNA: ENST00000538783.1

LINC02439-201, Transcript of long intergenic non-protein coding RNA 2439, humanhuman

TSL 3 BASIC

Gene LINC02439, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02439-201ENST00000538783 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
LINC02439-201ENST00000538783 RBM6P78332 1123 aaKnown RBP14.01□□□□□ -0.17
LINC02439-201ENST00000538783 SPATA31E1Q6ZUB1 1445 aa14□□□□□ -0.17
LINC02439-201ENST00000538783 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
LINC02439-201ENST00000538783 FOXO3O43524 673 aa14□□□□□ -0.17
LINC02439-201ENST00000538783 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
LINC02439-201ENST00000538783 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
LINC02439-201ENST00000538783 NHSL1Q5SYE7 1610 aa13.98□□□□□ -0.17
LINC02439-201ENST00000538783 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC02439-201ENST00000538783 USP21Q9UK80 565 aa13.98□□□□□ -0.17
LINC02439-201ENST00000538783 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
LINC02439-201ENST00000538783 C14orf93Q9H972 538 aaKnown RBP13.97□□□□□ -0.17
LINC02439-201ENST00000538783 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.17
LINC02439-201ENST00000538783 SIRT1Q96EB6 747 aa13.96□□□□□ -0.17
LINC02439-201ENST00000538783 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.17
LINC02439-201ENST00000538783 PPLO60437 1756 aa13.96□□□□□ -0.18
LINC02439-201ENST00000538783 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
LINC02439-201ENST00000538783 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
LINC02439-201ENST00000538783 POGKQ9P215 609 aa13.95□□□□□ -0.18
LINC02439-201ENST00000538783 TECPR2O15040 1411 aa13.95□□□□□ -0.18
LINC02439-201ENST00000538783 PIK3C2GO75747 1445 aa13.95□□□□□ -0.18
LINC02439-201ENST00000538783 YTHDC2Q9H6S0 1430 aaKnown RBP13.95□□□□□ -0.18
LINC02439-201ENST00000538783 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
LINC02439-201ENST00000538783 SETD1AO15047 1707 aaKnown RBP13.93□□□□□ -0.18
LINC02439-201ENST00000538783 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC02439-201ENST00000538783 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
LINC02439-201ENST00000538783 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
LINC02439-201ENST00000538783 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
LINC02439-201ENST00000538783 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
LINC02439-201ENST00000538783 PSME1Q06323 249 aa13.92□□□□□ -0.18
LINC02439-201ENST00000538783 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
LINC02439-201ENST00000538783 KRT28Q7Z3Y7 464 aa13.91□□□□□ -0.18
LINC02439-201ENST00000538783 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
LINC02439-201ENST00000538783 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
LINC02439-201ENST00000538783 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
LINC02439-201ENST00000538783 DCAF11Q8TEB1 546 aa13.89□□□□□ -0.19
LINC02439-201ENST00000538783 LAMC1P11047 1609 aa13.89□□□□□ -0.19
LINC02439-201ENST00000538783 RGS12O14924 1447 aa13.89□□□□□ -0.19
LINC02439-201ENST00000538783 SPATA31A3Q5VYP0 1347 aa13.89□□□□□ -0.19
LINC02439-201ENST00000538783 PXDNQ92626 1479 aa13.88□□□□□ -0.19
LINC02439-201ENST00000538783 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
LINC02439-201ENST00000538783 MYOM2P54296 1465 aa13.87□□□□□ -0.19
LINC02439-201ENST00000538783 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
LINC02439-201ENST00000538783 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
LINC02439-201ENST00000538783 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
LINC02439-201ENST00000538783 HRCP23327 699 aa13.86□□□□□ -0.19
LINC02439-201ENST00000538783 NRXN1Q9ULB1 1477 aa13.86□□□□□ -0.19
LINC02439-201ENST00000538783 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
LINC02439-201ENST00000538783 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
LINC02439-201ENST00000538783 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
LINC02439-201ENST00000538783 ATRNO75882 1429 aa13.84□□□□□ -0.19
LINC02439-201ENST00000538783 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
LINC02439-201ENST00000538783 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
LINC02439-201ENST00000538783 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
LINC02439-201ENST00000538783 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
LINC02439-201ENST00000538783 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
LINC02439-201ENST00000538783 BCL9LQ86UU0 1499 aa13.82□□□□□ -0.2
LINC02439-201ENST00000538783 KNDC1Q76NI1 1749 aa13.82□□□□□ -0.2
LINC02439-201ENST00000538783 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
LINC02439-201ENST00000538783 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
LINC02439-201ENST00000538783 ARHGEF10O15013 1369 aa13.82□□□□□ -0.2
LINC02439-201ENST00000538783 GPRASP1Q5JY77 1395 aa13.82□□□□□ -0.2
LINC02439-201ENST00000538783 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
LINC02439-201ENST00000538783 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
LINC02439-201ENST00000538783 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
LINC02439-201ENST00000538783 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
LINC02439-201ENST00000538783 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
LINC02439-201ENST00000538783 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
LINC02439-201ENST00000538783 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
LINC02439-201ENST00000538783 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
LINC02439-201ENST00000538783 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
LINC02439-201ENST00000538783 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
LINC02439-201ENST00000538783 VPS72Q15906 364 aa13.77□□□□□ -0.21
LINC02439-201ENST00000538783 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
LINC02439-201ENST00000538783 A0A0G2JS52 829 aa13.76□□□□□ -0.21
LINC02439-201ENST00000538783 MYT1Q01538 1121 aa13.76□□□□□ -0.21
LINC02439-201ENST00000538783 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
LINC02439-201ENST00000538783 SLIT2O94813 1529 aa13.75□□□□□ -0.21
LINC02439-201ENST00000538783 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
LINC02439-201ENST00000538783 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
LINC02439-201ENST00000538783 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
LINC02439-201ENST00000538783 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
LINC02439-201ENST00000538783 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
LINC02439-201ENST00000538783 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
LINC02439-201ENST00000538783 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
LINC02439-201ENST00000538783 SRCAPQ6ZRS2 3230 aa13.72□□□□□ -0.21
LINC02439-201ENST00000538783 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
LINC02439-201ENST00000538783 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
LINC02439-201ENST00000538783 TULP4Q9NRJ4 1543 aa13.71□□□□□ -0.21
LINC02439-201ENST00000538783 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
LINC02439-201ENST00000538783 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
LINC02439-201ENST00000538783 ADGRB2O60241 1585 aa13.71□□□□□ -0.22
LINC02439-201ENST00000538783 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
LINC02439-201ENST00000538783 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
LINC02439-201ENST00000538783 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
LINC02439-201ENST00000538783 EP400Q96L91 3159 aa13.7□□□□□ -0.22
LINC02439-201ENST00000538783 MARF1Q9Y4F3 1742 aaKnown RBP13.69□□□□□ -0.22
LINC02439-201ENST00000538783 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
LINC02439-201ENST00000538783 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
LINC02439-201ENST00000538783 RGPD8O14715 1765 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms