RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 RAPGEF3O95398 923 aa15.55■□□□□ 0.08
CPNE8-203ENST00000538596 IGHDP01880 384 aa15.54■□□□□ 0.08
CPNE8-203ENST00000538596 NEFMP07197 916 aa15.54■□□□□ 0.08
CPNE8-203ENST00000538596 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
CPNE8-203ENST00000538596 QRICH2Q9H0J4 1663 aa15.54■□□□□ 0.08
CPNE8-203ENST00000538596 SAFB2Q14151 953 aaKnown RBP eCLIP15.54■□□□□ 0.08
CPNE8-203ENST00000538596 PPLO60437 1756 aa15.53■□□□□ 0.08
CPNE8-203ENST00000538596 ADGRB1O14514 1584 aa15.53■□□□□ 0.08
CPNE8-203ENST00000538596 POGZQ7Z3K3 1410 aa15.53■□□□□ 0.08
CPNE8-203ENST00000538596 MTHFSP49914 203 aa15.53■□□□□ 0.08
CPNE8-203ENST00000538596 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
CPNE8-203ENST00000538596 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
CPNE8-203ENST00000538596 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.08
CPNE8-203ENST00000538596 TCP11L2Q8N4U5 519 aa15.52■□□□□ 0.08
CPNE8-203ENST00000538596 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.08
CPNE8-203ENST00000538596 SHPRHQ149N8 1683 aa15.52■□□□□ 0.07
CPNE8-203ENST00000538596 CANXP27824 592 aaKnown RBP15.51■□□□□ 0.07
CPNE8-203ENST00000538596 ZC3H13Q5T200 1668 aaKnown RBP15.5■□□□□ 0.07
CPNE8-203ENST00000538596 TNNQ9UQP3 1299 aa15.5■□□□□ 0.07
CPNE8-203ENST00000538596 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
CPNE8-203ENST00000538596 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
CPNE8-203ENST00000538596 CABP2Q9NPB3 220 aa15.5■□□□□ 0.07
CPNE8-203ENST00000538596 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
CPNE8-203ENST00000538596 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
CPNE8-203ENST00000538596 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
CPNE8-203ENST00000538596 ABCC3O15438 1527 aa15.48■□□□□ 0.07
CPNE8-203ENST00000538596 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
CPNE8-203ENST00000538596 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
CPNE8-203ENST00000538596 CGNL1Q0VF96 1302 aa15.47■□□□□ 0.07
CPNE8-203ENST00000538596 STK26Q9P289 416 aa15.47■□□□□ 0.07
CPNE8-203ENST00000538596 HECW2Q9P2P5 1572 aa15.47■□□□□ 0.07
CPNE8-203ENST00000538596 NGEFQ8N5V2 710 aa15.47■□□□□ 0.07
CPNE8-203ENST00000538596 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.07
CPNE8-203ENST00000538596 PDE3AQ14432 1141 aa15.46■□□□□ 0.07
CPNE8-203ENST00000538596 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
CPNE8-203ENST00000538596 RLBP1P12271 317 aa15.46■□□□□ 0.07
CPNE8-203ENST00000538596 GLI2P10070 1586 aa15.46■□□□□ 0.07
CPNE8-203ENST00000538596 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.06
CPNE8-203ENST00000538596 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
CPNE8-203ENST00000538596 IQSEC2Q5JU85 1478 aa15.45■□□□□ 0.06
CPNE8-203ENST00000538596 EVC2Q86UK5 1308 aa15.45■□□□□ 0.06
CPNE8-203ENST00000538596 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
CPNE8-203ENST00000538596 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPNE8-203ENST00000538596 IDI1Q13907 227 aa15.45■□□□□ 0.06
CPNE8-203ENST00000538596 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
CPNE8-203ENST00000538596 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
CPNE8-203ENST00000538596 CAMSAP1Q5T5Y3 1602 aa15.44■□□□□ 0.06
CPNE8-203ENST00000538596 VGFO15240 615 aaPredicted RBP15.43■□□□□ 0.06
CPNE8-203ENST00000538596 CFAP53Q96M91 514 aa15.43■□□□□ 0.06
CPNE8-203ENST00000538596 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
CPNE8-203ENST00000538596 SEC24BO95487 1268 aa15.42■□□□□ 0.06
CPNE8-203ENST00000538596 PCDHB15Q9Y5E8 787 aa15.42■□□□□ 0.06
CPNE8-203ENST00000538596 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
CPNE8-203ENST00000538596 ARHGEF28Q8N1W1 1705 aaKnown RBP15.42■□□□□ 0.06
CPNE8-203ENST00000538596 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
CPNE8-203ENST00000538596 ANKRD36BQ8N2N9 1353 aa15.42■□□□□ 0.06
CPNE8-203ENST00000538596 GGNBP2Q9H3C7 697 aa15.42■□□□□ 0.06
CPNE8-203ENST00000538596 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
CPNE8-203ENST00000538596 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
CPNE8-203ENST00000538596 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
CPNE8-203ENST00000538596 NFKBIBQ15653 356 aa15.4■□□□□ 0.06
CPNE8-203ENST00000538596 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
CPNE8-203ENST00000538596 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
CPNE8-203ENST00000538596 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
CPNE8-203ENST00000538596 U2SURPO15042 1029 aaKnown RBP15.39■□□□□ 0.05
CPNE8-203ENST00000538596 MINK1Q8N4C8 1332 aaPredicted RBP15.39■□□□□ 0.05
CPNE8-203ENST00000538596 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
CPNE8-203ENST00000538596 USP19O94966 1318 aa15.38■□□□□ 0.05
CPNE8-203ENST00000538596 DIP2BQ9P265 1576 aa15.38■□□□□ 0.05
CPNE8-203ENST00000538596 NINLQ9Y2I6 1382 aa15.38■□□□□ 0.05
CPNE8-203ENST00000538596 NEO1Q92859 1461 aa15.38■□□□□ 0.05
CPNE8-203ENST00000538596 DIP2CQ9Y2E4 1556 aa15.37■□□□□ 0.05
CPNE8-203ENST00000538596 YEATS2Q9ULM3 1422 aa15.37■□□□□ 0.05
CPNE8-203ENST00000538596 CCDC27Q2M243 656 aa15.37■□□□□ 0.05
CPNE8-203ENST00000538596 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
CPNE8-203ENST00000538596 PRAM1Q96QH2 718 aa15.36■□□□□ 0.05
CPNE8-203ENST00000538596 RICTORQ6R327 1708 aa15.35■□□□□ 0.05
CPNE8-203ENST00000538596 FBXO31Q5XUX0 539 aaPredicted RBP15.35■□□□□ 0.05
CPNE8-203ENST00000538596 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
CPNE8-203ENST00000538596 PUS7Q96PZ0 661 aaKnown RBP15.34■□□□□ 0.05
CPNE8-203ENST00000538596 NSD2O96028 1365 aa15.34■□□□□ 0.05
CPNE8-203ENST00000538596 MAPK8IP3Q9UPT6 1336 aa15.34■□□□□ 0.05
CPNE8-203ENST00000538596 FYB1O15117 783 aa15.34■□□□□ 0.05
CPNE8-203ENST00000538596 PLEKHF1Q96S99 279 aa15.34■□□□□ 0.05
CPNE8-203ENST00000538596 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
CPNE8-203ENST00000538596 ABCC11Q96J66 1382 aa15.33■□□□□ 0.05
CPNE8-203ENST00000538596 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.04
CPNE8-203ENST00000538596 POGKQ9P215 609 aa15.33■□□□□ 0.04
CPNE8-203ENST00000538596 FBLN1P23142 703 aa15.33■□□□□ 0.04
CPNE8-203ENST00000538596 IL27Q8NEV9 243 aa15.33■□□□□ 0.04
CPNE8-203ENST00000538596 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
CPNE8-203ENST00000538596 TRIM35Q9UPQ4 493 aa15.33■□□□□ 0.04
CPNE8-203ENST00000538596 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
CPNE8-203ENST00000538596 TMPOP42166 694 aaKnown RBP15.32■□□□□ 0.04
CPNE8-203ENST00000538596 VIRMAQ69YN4 1812 aaKnown RBP15.32■□□□□ 0.04
CPNE8-203ENST00000538596 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
CPNE8-203ENST00000538596 PTPRMP28827 1452 aa15.31■□□□□ 0.04
CPNE8-203ENST00000538596 ADGRB2O60241 1585 aa15.3■□□□□ 0.04
CPNE8-203ENST00000538596 MVPQ14764 893 aaKnown RBP15.3■□□□□ 0.04
CPNE8-203ENST00000538596 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms