RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ABCA10Q8WWZ4 1543 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 ADGRL1O94910 1474 aa6.61□□□□□ -1.35
LRP6-203ENST00000538239 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
LRP6-203ENST00000538239 EPRSP07814 1512 aaKnown RBP6.61□□□□□ -1.35
LRP6-203ENST00000538239 PRDM11Q9NQV5 511 aa6.61□□□□□ -1.35
LRP6-203ENST00000538239 TCEAL9Q9UHQ7 104 aa6.61□□□□□ -1.35
LRP6-203ENST00000538239 ANO8Q9HCE9 1232 aaPredicted RBP6.61□□□□□ -1.35
LRP6-203ENST00000538239 MAGI1Q96QZ7 1491 aaPredicted RBP6.61□□□□□ -1.35
LRP6-203ENST00000538239 ZNF608Q9ULD9 1512 aaPredicted RBP6.61□□□□□ -1.35
LRP6-203ENST00000538239 ZC3H6P61129 1189 aaKnown RBP6.61□□□□□ -1.35
LRP6-203ENST00000538239 SYNE3Q6ZMZ3 975 aa6.61□□□□□ -1.35
LRP6-203ENST00000538239 PDE4CQ08493 712 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 KIAA2012Q0VF49 1180 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 API5Q9BZZ5 524 aaKnown RBP6.6□□□□□ -1.35
LRP6-203ENST00000538239 URB2Q14146 1524 aaKnown RBP6.6□□□□□ -1.35
LRP6-203ENST00000538239 CCDC7Q96M83 1385 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 H3BQV1 296 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 LRRFIP1Q32MZ4 808 aaKnown RBP6.6□□□□□ -1.35
LRP6-203ENST00000538239 IFFO2Q5TF58 517 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 GAS2L2Q8NHY3 880 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 GBP4Q96PP9 640 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 GZF1Q9H116 711 aaPredicted RBP6.6□□□□□ -1.35
LRP6-203ENST00000538239 SLC12A5Q9H2X9 1139 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 ADAMTS2O95450 1211 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 TIAM1Q13009 1591 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 KIAA1107Q9UPP5 1409 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 PCF11O94913 1555 aaKnown RBP6.6□□□□□ -1.35
LRP6-203ENST00000538239 PRXQ9BXM0 1461 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 PRKAR2BP31323 418 aa6.6□□□□□ -1.35
LRP6-203ENST00000538239 L1TD1Q5T7N2 865 aaKnown RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 DZIP1LQ8IYY4 767 aaKnown RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 ROCK1Q13464 1354 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 RRS1Q15050 365 aaKnown RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 FAM184AQ8NB25 1140 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 EXOC6Q8TAG9 804 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 ANO2Q9NQ90 1003 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 ST18O60284 1047 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 RRP1P56182 461 aaKnown RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 HFM1A2PYH4 1435 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 FBXO31Q5XUX0 539 aaPredicted RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 SULT6B1Q6IMI4 303 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 WAPLQ7Z5K2 1190 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 ZNF692Q9BU19 519 aaPredicted RBP6.59□□□□□ -1.35
LRP6-203ENST00000538239 DDX19BQ9UMR2 479 aa6.59□□□□□ -1.35
LRP6-203ENST00000538239 CNTLNQ9NXG0 1405 aa6.59□□□□□ -1.36
LRP6-203ENST00000538239 MTMR7Q9Y216 660 aa6.59□□□□□ -1.36
LRP6-203ENST00000538239 CAMSAP2Q08AD1 1489 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 FOXD4L6Q3SYB3 417 aaPredicted RBP6.58□□□□□ -1.36
LRP6-203ENST00000538239 FOXD4L3Q6VB84 417 aaPredicted RBP6.58□□□□□ -1.36
LRP6-203ENST00000538239 WASHC2AQ641Q2 1341 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 MYL6BP14649 208 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 CCDC141Q6ZP82 1450 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 UBTFL1P0CB47 393 aaPredicted RBP6.58□□□□□ -1.36
LRP6-203ENST00000538239 TPM4P67936 248 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 ZNF530Q6P9A1 599 aaPredicted RBP6.58□□□□□ -1.36
LRP6-203ENST00000538239 CHAF1AQ13111 956 aaPredicted RBP6.58□□□□□ -1.36
LRP6-203ENST00000538239 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 CCDC30Q5VVM6 783 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 CCDC34Q96HJ3 373 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 RUFY2Q8WXA3 655 aa6.58□□□□□ -1.36
LRP6-203ENST00000538239 BICDL1Q6ZP65 573 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 PRM3Q9NNZ6 103 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 FOSBP53539 338 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 CENPQQ7L2Z9 268 aaPredicted RBP6.57□□□□□ -1.36
LRP6-203ENST00000538239 NUDT16Q96DE0 195 aaKnown RBP6.57□□□□□ -1.36
LRP6-203ENST00000538239 ADAMTS8Q9UP79 889 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 KIF3AQ9Y496 699 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 ERICH2A1L162 156 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 PPP2R1AP30153 589 aa6.57□□□□□ -1.36
LRP6-203ENST00000538239 NAP1L5Q96NT1 182 aaPredicted RBP6.57□□□□□ -1.36
LRP6-203ENST00000538239 TRDNQ13061 729 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 CSPP1Q1MSJ5 1256 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 RPGRIP1LQ68CZ1 1315 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 PES1O00541 588 aaKnown RBP6.56□□□□□ -1.36
LRP6-203ENST00000538239 RTN4Q9NQC3 1192 aaKnown RBP6.56□□□□□ -1.36
LRP6-203ENST00000538239 CNNM1Q9NRU3 951 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 KDM4AO75164 1064 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 SYAP1Q96A49 352 aaPredicted RBP6.56□□□□□ -1.36
LRP6-203ENST00000538239 AKNAQ7Z591 1439 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 TRIM29Q14134 588 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 FANCAO15360 1455 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 DENND4BO75064 1496 aaPredicted RBP6.56□□□□□ -1.36
LRP6-203ENST00000538239 ZBED9Q6R2W3 1325 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 MSNP26038 577 aaKnown RBP6.56□□□□□ -1.36
LRP6-203ENST00000538239 TCP11L2Q8N4U5 519 aa6.56□□□□□ -1.36
LRP6-203ENST00000538239 PTPN23Q9H3S7 1636 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 PANK1Q8TE04 598 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 DNAJC2Q99543 621 aaKnown RBP6.55□□□□□ -1.36
LRP6-203ENST00000538239 RBM19Q9Y4C8 960 aaKnown RBP6.55□□□□□ -1.36
LRP6-203ENST00000538239 PTMSP20962 102 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 SLC4A3P48751 1232 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 IKQ13123 557 aaPredicted RBP6.55□□□□□ -1.36
LRP6-203ENST00000538239 PPP6R1Q9UPN7 881 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 AMOTL2Q9Y2J4 779 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 TPD52L1Q16890 204 aaPredicted RBP6.55□□□□□ -1.36
LRP6-203ENST00000538239 HSP90AB4PQ58FF6 505 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms