RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
LMO3-219ENST00000538051 SLC26A8Q96RN1 970 aa17.37■□□□□ 0.37
LMO3-219ENST00000538051 TMF1P82094 1093 aa17.35■□□□□ 0.37
LMO3-219ENST00000538051 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
LMO3-219ENST00000538051 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
LMO3-219ENST00000538051 ADGRB2O60241 1585 aa17.34■□□□□ 0.37
LMO3-219ENST00000538051 KCNA6P17658 529 aa17.34■□□□□ 0.37
LMO3-219ENST00000538051 TESK2Q96S53 571 aa17.34■□□□□ 0.37
LMO3-219ENST00000538051 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
LMO3-219ENST00000538051 PTPRUQ92729 1446 aa17.33■□□□□ 0.36
LMO3-219ENST00000538051 POGKQ9P215 609 aa17.32■□□□□ 0.36
LMO3-219ENST00000538051 AMOTL2Q9Y2J4 779 aa17.32■□□□□ 0.36
LMO3-219ENST00000538051 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
LMO3-219ENST00000538051 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
LMO3-219ENST00000538051 STK26Q9P289 416 aa17.3■□□□□ 0.36
LMO3-219ENST00000538051 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
LMO3-219ENST00000538051 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
LMO3-219ENST00000538051 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
LMO3-219ENST00000538051 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
LMO3-219ENST00000538051 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
LMO3-219ENST00000538051 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
LMO3-219ENST00000538051 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
LMO3-219ENST00000538051 DCCP43146 1447 aa17.24■□□□□ 0.35
LMO3-219ENST00000538051 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
LMO3-219ENST00000538051 WASHC2AQ641Q2 1341 aa17.23■□□□□ 0.35
LMO3-219ENST00000538051 ADGRL3Q9HAR2 1447 aa17.23■□□□□ 0.35
LMO3-219ENST00000538051 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
LMO3-219ENST00000538051 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
LMO3-219ENST00000538051 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.34
LMO3-219ENST00000538051 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
LMO3-219ENST00000538051 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
LMO3-219ENST00000538051 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
LMO3-219ENST00000538051 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
LMO3-219ENST00000538051 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
LMO3-219ENST00000538051 XIRP1Q702N8 1843 aaKnown RBP17.19■□□□□ 0.34
LMO3-219ENST00000538051 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
LMO3-219ENST00000538051 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
LMO3-219ENST00000538051 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
LMO3-219ENST00000538051 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
LMO3-219ENST00000538051 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
LMO3-219ENST00000538051 MYOM1P52179 1685 aa17.16■□□□□ 0.34
LMO3-219ENST00000538051 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
LMO3-219ENST00000538051 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
LMO3-219ENST00000538051 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
LMO3-219ENST00000538051 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
LMO3-219ENST00000538051 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
LMO3-219ENST00000538051 ATP7BP35670 1465 aa17.15■□□□□ 0.34
LMO3-219ENST00000538051 TOPAZ1Q8N9V7 1692 aa17.14■□□□□ 0.33
LMO3-219ENST00000538051 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
LMO3-219ENST00000538051 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
LMO3-219ENST00000538051 MSH6P52701 1360 aa17.13■□□□□ 0.33
LMO3-219ENST00000538051 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
LMO3-219ENST00000538051 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
LMO3-219ENST00000538051 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
LMO3-219ENST00000538051 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
LMO3-219ENST00000538051 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
LMO3-219ENST00000538051 NUDT16Q96DE0 195 aaKnown RBP17.09■□□□□ 0.33
LMO3-219ENST00000538051 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
LMO3-219ENST00000538051 ROBO1Q9Y6N7 1651 aa17.09■□□□□ 0.33
LMO3-219ENST00000538051 KIF1AQ12756 1690 aa17.08■□□□□ 0.32
LMO3-219ENST00000538051 KTN1Q86UP2 1357 aaKnown RBP17.08■□□□□ 0.32
LMO3-219ENST00000538051 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
LMO3-219ENST00000538051 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
LMO3-219ENST00000538051 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
LMO3-219ENST00000538051 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
LMO3-219ENST00000538051 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
LMO3-219ENST00000538051 ATF3P18847 181 aa17.07■□□□□ 0.32
LMO3-219ENST00000538051 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
LMO3-219ENST00000538051 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
LMO3-219ENST00000538051 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
LMO3-219ENST00000538051 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
LMO3-219ENST00000538051 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
LMO3-219ENST00000538051 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
LMO3-219ENST00000538051 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
LMO3-219ENST00000538051 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
LMO3-219ENST00000538051 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
LMO3-219ENST00000538051 POLR3AO14802 1390 aaPredicted RBP17.04■□□□□ 0.32
LMO3-219ENST00000538051 NSD2O96028 1365 aa17.04■□□□□ 0.32
LMO3-219ENST00000538051 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
LMO3-219ENST00000538051 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
LMO3-219ENST00000538051 MST1RQ04912 1400 aa17.03■□□□□ 0.32
LMO3-219ENST00000538051 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
LMO3-219ENST00000538051 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
LMO3-219ENST00000538051 PANK3Q9H999 370 aa17.02■□□□□ 0.32
LMO3-219ENST00000538051 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
LMO3-219ENST00000538051 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
LMO3-219ENST00000538051 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
LMO3-219ENST00000538051 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
LMO3-219ENST00000538051 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
LMO3-219ENST00000538051 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
LMO3-219ENST00000538051 RGPD8O14715 1765 aaPredicted RBP17.01■□□□□ 0.31
LMO3-219ENST00000538051 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
LMO3-219ENST00000538051 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
LMO3-219ENST00000538051 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
LMO3-219ENST00000538051 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
LMO3-219ENST00000538051 ANP32CO43423 234 aa16.97■□□□□ 0.31
LMO3-219ENST00000538051 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
LMO3-219ENST00000538051 PHF8Q9UPP1 1060 aa16.97■□□□□ 0.31
LMO3-219ENST00000538051 JCADQ9P266 1359 aa16.97■□□□□ 0.31
LMO3-219ENST00000538051 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms