RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
CLPB-209ENST00000538039 INO80Q9ULG1 1556 aaPredicted RBP18.16■□□□□ 0.5
CLPB-209ENST00000538039 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
CLPB-209ENST00000538039 MORC1Q86VD1 984 aa18.16■□□□□ 0.5
CLPB-209ENST00000538039 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
CLPB-209ENST00000538039 MTHFSP49914 203 aa18.16■□□□□ 0.5
CLPB-209ENST00000538039 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
CLPB-209ENST00000538039 STAC3Q96MF2 364 aa18.15■□□□□ 0.5
CLPB-209ENST00000538039 FANCAO15360 1455 aa18.15■□□□□ 0.5
CLPB-209ENST00000538039 MYOM2P54296 1465 aa18.15■□□□□ 0.5
CLPB-209ENST00000538039 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
CLPB-209ENST00000538039 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
CLPB-209ENST00000538039 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
CLPB-209ENST00000538039 PDZRN3Q9UPQ7 1066 aa18.13■□□□□ 0.49
CLPB-209ENST00000538039 NRXN1Q9ULB1 1477 aa18.13■□□□□ 0.49
CLPB-209ENST00000538039 KIF1BO60333 1816 aa18.13■□□□□ 0.49
CLPB-209ENST00000538039 KANK1Q14678 1352 aa18.12■□□□□ 0.49
CLPB-209ENST00000538039 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
CLPB-209ENST00000538039 TSR2Q969E8 191 aaKnown RBP18.11■□□□□ 0.49
CLPB-209ENST00000538039 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
CLPB-209ENST00000538039 MYO3AQ8NEV4 1616 aa18.1■□□□□ 0.49
CLPB-209ENST00000538039 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
CLPB-209ENST00000538039 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
CLPB-209ENST00000538039 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
CLPB-209ENST00000538039 ADGRL1O94910 1474 aa18.09■□□□□ 0.49
CLPB-209ENST00000538039 ADGRB1O14514 1584 aa18.08■□□□□ 0.48
CLPB-209ENST00000538039 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLPB-209ENST00000538039 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
CLPB-209ENST00000538039 QRICH2Q9H0J4 1663 aa18.07■□□□□ 0.48
CLPB-209ENST00000538039 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
CLPB-209ENST00000538039 TBC1D2Q9BYX2 928 aa18.07■□□□□ 0.48
CLPB-209ENST00000538039 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
CLPB-209ENST00000538039 ZC3H13Q5T200 1668 aaKnown RBP18.07■□□□□ 0.48
CLPB-209ENST00000538039 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
CLPB-209ENST00000538039 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
CLPB-209ENST00000538039 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
CLPB-209ENST00000538039 TBC1D32Q96NH3 1257 aa18.05■□□□□ 0.48
CLPB-209ENST00000538039 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
CLPB-209ENST00000538039 ARAP3Q8WWN8 1544 aa18.05■□□□□ 0.48
CLPB-209ENST00000538039 ADGRB3O60242 1522 aa18.05■□□□□ 0.48
CLPB-209ENST00000538039 NPATQ14207 1427 aa18.04■□□□□ 0.48
CLPB-209ENST00000538039 GGT6Q6P531 493 aa18.04■□□□□ 0.48
CLPB-209ENST00000538039 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
CLPB-209ENST00000538039 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLPB-209ENST00000538039 WDR63Q8IWG1 891 aa18.03■□□□□ 0.48
CLPB-209ENST00000538039 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
CLPB-209ENST00000538039 CD109Q6YHK3 1445 aa18.02■□□□□ 0.48
CLPB-209ENST00000538039 PPLO60437 1756 aa18.02■□□□□ 0.47
CLPB-209ENST00000538039 NINLQ9Y2I6 1382 aa18.01■□□□□ 0.47
CLPB-209ENST00000538039 MVPQ14764 893 aaKnown RBP18.01■□□□□ 0.47
CLPB-209ENST00000538039 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
CLPB-209ENST00000538039 TULP4Q9NRJ4 1543 aa18.01■□□□□ 0.47
CLPB-209ENST00000538039 ARXQ96QS3 562 aa18■□□□□ 0.47
CLPB-209ENST00000538039 EXOSC9Q06265 439 aaKnown RBP18■□□□□ 0.47
CLPB-209ENST00000538039 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
CLPB-209ENST00000538039 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
CLPB-209ENST00000538039 TRIM27P14373 513 aa17.99■□□□□ 0.47
CLPB-209ENST00000538039 PLEKHF1Q96S99 279 aa17.99■□□□□ 0.47
CLPB-209ENST00000538039 FBLN1P23142 703 aa17.99■□□□□ 0.47
CLPB-209ENST00000538039 CCDC27Q2M243 656 aa17.99■□□□□ 0.47
CLPB-209ENST00000538039 SSH1Q8WYL5 1049 aa17.99■□□□□ 0.47
CLPB-209ENST00000538039 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
CLPB-209ENST00000538039 FRMPD1Q5SYB0 1578 aa17.97■□□□□ 0.47
CLPB-209ENST00000538039 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
CLPB-209ENST00000538039 ASXL2Q76L83 1435 aa17.96■□□□□ 0.47
CLPB-209ENST00000538039 DZIP1LQ8IYY4 767 aaKnown RBP17.96■□□□□ 0.47
CLPB-209ENST00000538039 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
CLPB-209ENST00000538039 STK26Q9P289 416 aa17.95■□□□□ 0.46
CLPB-209ENST00000538039 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
CLPB-209ENST00000538039 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
CLPB-209ENST00000538039 BECN1Q14457 450 aa17.95■□□□□ 0.46
CLPB-209ENST00000538039 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
CLPB-209ENST00000538039 LMTK2Q8IWU2 1503 aa17.94■□□□□ 0.46
CLPB-209ENST00000538039 NOB1Q9ULX3 412 aaKnown RBP17.94■□□□□ 0.46
CLPB-209ENST00000538039 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
CLPB-209ENST00000538039 GLI2P10070 1586 aa17.94■□□□□ 0.46
CLPB-209ENST00000538039 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
CLPB-209ENST00000538039 RRAGDQ9NQL2 400 aaPredicted RBP17.94■□□□□ 0.46
CLPB-209ENST00000538039 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
CLPB-209ENST00000538039 GZF1Q9H116 711 aaPredicted RBP17.93■□□□□ 0.46
CLPB-209ENST00000538039 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
CLPB-209ENST00000538039 USP32Q8NFA0 1604 aa17.93■□□□□ 0.46
CLPB-209ENST00000538039 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
CLPB-209ENST00000538039 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
CLPB-209ENST00000538039 ANKRD36BQ8N2N9 1353 aa17.92■□□□□ 0.46
CLPB-209ENST00000538039 ARHGEF28Q8N1W1 1705 aaKnown RBP17.92■□□□□ 0.46
CLPB-209ENST00000538039 FTSJ3Q8IY81 847 aaKnown RBP17.92■□□□□ 0.46
CLPB-209ENST00000538039 CAMSAP1Q5T5Y3 1602 aa17.92■□□□□ 0.46
CLPB-209ENST00000538039 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
CLPB-209ENST00000538039 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
CLPB-209ENST00000538039 PANK2Q9BZ23 570 aa17.91■□□□□ 0.46
CLPB-209ENST00000538039 C22orf23Q9BZE7 217 aa17.9■□□□□ 0.46
CLPB-209ENST00000538039 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
CLPB-209ENST00000538039 FYB1O15117 783 aa17.89■□□□□ 0.45
CLPB-209ENST00000538039 EVC2Q86UK5 1308 aa17.89■□□□□ 0.45
CLPB-209ENST00000538039 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
CLPB-209ENST00000538039 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLPB-209ENST00000538039 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
CLPB-209ENST00000538039 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
CLPB-209ENST00000538039 IDI1Q13907 227 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms