RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 PTPN5P54829 565 aa13.52□□□□□ -0.25
LMO3-216ENST00000537568 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.25
LMO3-216ENST00000537568 IQGAP2Q13576 1575 aa13.52□□□□□ -0.25
LMO3-216ENST00000537568 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
LMO3-216ENST00000537568 FANCAO15360 1455 aa13.51□□□□□ -0.25
LMO3-216ENST00000537568 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
LMO3-216ENST00000537568 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
LMO3-216ENST00000537568 MLECQ14165 292 aa13.51□□□□□ -0.25
LMO3-216ENST00000537568 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
LMO3-216ENST00000537568 NEO1Q92859 1461 aa13.5□□□□□ -0.25
LMO3-216ENST00000537568 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
LMO3-216ENST00000537568 ARHGEF12Q9NZN5 1544 aa13.49□□□□□ -0.25
LMO3-216ENST00000537568 SEPT9Q9UHD8 586 aaPredicted RBP13.49□□□□□ -0.25
LMO3-216ENST00000537568 CDHR5Q9HBB8 845 aa13.48□□□□□ -0.25
LMO3-216ENST00000537568 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
LMO3-216ENST00000537568 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
LMO3-216ENST00000537568 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
LMO3-216ENST00000537568 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.25
LMO3-216ENST00000537568 PLA2G2EQ9NZK7 142 aa13.46□□□□□ -0.25
LMO3-216ENST00000537568 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
LMO3-216ENST00000537568 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
LMO3-216ENST00000537568 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
LMO3-216ENST00000537568 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
LMO3-216ENST00000537568 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
LMO3-216ENST00000537568 FHOD3Q2V2M9 1422 aa13.45□□□□□ -0.26
LMO3-216ENST00000537568 UGGT2Q9NYU1 1516 aa13.44□□□□□ -0.26
LMO3-216ENST00000537568 ANKK1Q8NFD2 765 aa13.44□□□□□ -0.26
LMO3-216ENST00000537568 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
LMO3-216ENST00000537568 ABCA8O94911 1581 aa13.44□□□□□ -0.26
LMO3-216ENST00000537568 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
LMO3-216ENST00000537568 PRSS12P56730 875 aa13.43□□□□□ -0.26
LMO3-216ENST00000537568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
LMO3-216ENST00000537568 POTEAQ6S8J7 498 aa13.42□□□□□ -0.26
LMO3-216ENST00000537568 PACS2Q86VP3 889 aa13.42□□□□□ -0.26
LMO3-216ENST00000537568 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
LMO3-216ENST00000537568 BCAMP50895 628 aa13.41□□□□□ -0.26
LMO3-216ENST00000537568 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
LMO3-216ENST00000537568 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
LMO3-216ENST00000537568 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
LMO3-216ENST00000537568 DENND4BO75064 1496 aaPredicted RBP13.41□□□□□ -0.26
LMO3-216ENST00000537568 ZMYM4Q5VZL5 1548 aa13.4□□□□□ -0.26
LMO3-216ENST00000537568 SETD1BQ9UPS6 1966 aaKnown RBP13.4□□□□□ -0.26
LMO3-216ENST00000537568 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
LMO3-216ENST00000537568 CARMIL1Q5VZK9 1371 aa13.39□□□□□ -0.27
LMO3-216ENST00000537568 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
LMO3-216ENST00000537568 C3orf80F5H4A9 247 aa13.37□□□□□ -0.27
LMO3-216ENST00000537568 SMAPO00193 183 aa13.37□□□□□ -0.27
LMO3-216ENST00000537568 ARXQ96QS3 562 aa13.37□□□□□ -0.27
LMO3-216ENST00000537568 NPDC1Q9NQX5 325 aaPredicted RBP13.37□□□□□ -0.27
LMO3-216ENST00000537568 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
LMO3-216ENST00000537568 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
LMO3-216ENST00000537568 SEMA3EO15041 775 aa13.34□□□□□ -0.27
LMO3-216ENST00000537568 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
LMO3-216ENST00000537568 CAMSAP1Q5T5Y3 1602 aa13.34□□□□□ -0.27
LMO3-216ENST00000537568 ATP10BO94823 1461 aa13.34□□□□□ -0.27
LMO3-216ENST00000537568 TOM1O60784 492 aa13.33□□□□□ -0.28
LMO3-216ENST00000537568 MAGI2Q86UL8 1455 aa13.32□□□□□ -0.28
LMO3-216ENST00000537568 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
LMO3-216ENST00000537568 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
LMO3-216ENST00000537568 TATDN2Q93075 761 aa13.32□□□□□ -0.28
LMO3-216ENST00000537568 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
LMO3-216ENST00000537568 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
LMO3-216ENST00000537568 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
LMO3-216ENST00000537568 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
LMO3-216ENST00000537568 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.31□□□□□ -0.28
LMO3-216ENST00000537568 WBP1LQ9NX94 342 aa13.3□□□□□ -0.28
LMO3-216ENST00000537568 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
LMO3-216ENST00000537568 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
LMO3-216ENST00000537568 BRPF1P55201 1214 aaPredicted RBP13.29□□□□□ -0.28
LMO3-216ENST00000537568 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
LMO3-216ENST00000537568 TTC13Q8NBP0 860 aa13.29□□□□□ -0.28
LMO3-216ENST00000537568 C3P01024 1663 aa13.28□□□□□ -0.28
LMO3-216ENST00000537568 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
LMO3-216ENST00000537568 ATP10AO60312 1499 aa13.27□□□□□ -0.29
LMO3-216ENST00000537568 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
LMO3-216ENST00000537568 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
LMO3-216ENST00000537568 SAMD7Q7Z3H4 446 aa13.26□□□□□ -0.29
LMO3-216ENST00000537568 TSR3Q9UJK0 312 aaKnown RBP13.26□□□□□ -0.29
LMO3-216ENST00000537568 PTGDRQ13258 359 aa13.25□□□□□ -0.29
LMO3-216ENST00000537568 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
LMO3-216ENST00000537568 ZC3H15Q8WU90 426 aaKnown RBP13.24□□□□□ -0.29
LMO3-216ENST00000537568 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
LMO3-216ENST00000537568 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
LMO3-216ENST00000537568 TESPA1A2RU30 521 aaPredicted RBP13.21□□□□□ -0.29
LMO3-216ENST00000537568 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
LMO3-216ENST00000537568 PLA2R1Q13018 1463 aa13.21□□□□□ -0.3
LMO3-216ENST00000537568 RAPGEF2Q9Y4G8 1499 aa13.21□□□□□ -0.3
LMO3-216ENST00000537568 CPS1P31327 1500 aa13.19□□□□□ -0.3
LMO3-216ENST00000537568 PPP4CP60510 307 aa13.19□□□□□ -0.3
LMO3-216ENST00000537568 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
LMO3-216ENST00000537568 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
LMO3-216ENST00000537568 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
LMO3-216ENST00000537568 EYA1Q99502 592 aa13.17□□□□□ -0.3
LMO3-216ENST00000537568 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
LMO3-216ENST00000537568 RNF40O75150 1001 aa13.16□□□□□ -0.3
LMO3-216ENST00000537568 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
LMO3-216ENST00000537568 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
LMO3-216ENST00000537568 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
LMO3-216ENST00000537568 FCHSD2O94868 740 aa13.14□□□□□ -0.31
LMO3-216ENST00000537568 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms