RNA–Protein interactions for RNA: ENST00000537540.1

SPRYD3-202, Transcript of SPRY domain containing 3, humanhuman

TSL 2

Gene SPRYD3, Length 927 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRYD3-202ENST00000537540 LRRC59Q96AG4 307 aaKnown RBP25.39■■□□□ 1.66
SPRYD3-202ENST00000537540 MYOM2P54296 1465 aa25.39■■□□□ 1.65
SPRYD3-202ENST00000537540 NRXN1Q9ULB1 1477 aa25.37■■□□□ 1.65
SPRYD3-202ENST00000537540 ORAI2Q96SN7 254 aa25.37■■□□□ 1.65
SPRYD3-202ENST00000537540 WAPLQ7Z5K2 1190 aa25.36■■□□□ 1.65
SPRYD3-202ENST00000537540 YTHDC2Q9H6S0 1430 aaKnown RBP25.36■■□□□ 1.65
SPRYD3-202ENST00000537540 ABCC11Q96J66 1382 aa25.35■■□□□ 1.65
SPRYD3-202ENST00000537540 PLEKHH1Q9ULM0 1364 aa25.34■■□□□ 1.65
SPRYD3-202ENST00000537540 C14orf93Q9H972 538 aaKnown RBP25.33■■□□□ 1.65
SPRYD3-202ENST00000537540 PNPLA6Q8IY17 1366 aa25.32■■□□□ 1.64
SPRYD3-202ENST00000537540 CFAP70Q5T0N1 1121 aa25.31■■□□□ 1.64
SPRYD3-202ENST00000537540 FMN2Q9NZ56 1722 aa25.3■■□□□ 1.64
SPRYD3-202ENST00000537540 HRCP23327 699 aa25.3■■□□□ 1.64
SPRYD3-202ENST00000537540 RXRBP28702 533 aa25.3■■□□□ 1.64
SPRYD3-202ENST00000537540 SOS2Q07890 1332 aaPredicted RBP25.28■■□□□ 1.64
SPRYD3-202ENST00000537540 NUTM2FA1L443 756 aa25.27■■□□□ 1.64
SPRYD3-202ENST00000537540 ESCO1Q5FWF5 840 aa25.27■■□□□ 1.64
SPRYD3-202ENST00000537540 AFF2P51816 1311 aa25.27■■□□□ 1.64
SPRYD3-202ENST00000537540 DHX57Q6P158 1386 aaKnown RBP25.27■■□□□ 1.64
SPRYD3-202ENST00000537540 RGPD8O14715 1765 aaPredicted RBP25.26■■□□□ 1.63
SPRYD3-202ENST00000537540 SIRT1Q96EB6 747 aa25.23■■□□□ 1.63
SPRYD3-202ENST00000537540 C8orf37Q96NL8 207 aa25.23■■□□□ 1.63
SPRYD3-202ENST00000537540 UPF1Q92900 1129 aaKnown RBP eCLIP25.22■■□□□ 1.63
SPRYD3-202ENST00000537540 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
SPRYD3-202ENST00000537540 ADGRB1O14514 1584 aa25.22■■□□□ 1.63
SPRYD3-202ENST00000537540 NPHP3Q7Z494 1330 aa25.21■■□□□ 1.63
SPRYD3-202ENST00000537540 DCAF11Q8TEB1 546 aa25.21■■□□□ 1.63
SPRYD3-202ENST00000537540 COL22A1Q8NFW1 1626 aaPredicted RBP25.21■■□□□ 1.63
SPRYD3-202ENST00000537540 PXDNQ92626 1479 aa25.21■■□□□ 1.63
SPRYD3-202ENST00000537540 KIF1AQ12756 1690 aa25.2■■□□□ 1.63
SPRYD3-202ENST00000537540 QTRT2Q9H974 415 aaKnown RBP25.2■■□□□ 1.62
SPRYD3-202ENST00000537540 DLC1Q96QB1 1528 aa25.2■■□□□ 1.62
SPRYD3-202ENST00000537540 FOXO3O43524 673 aa25.19■■□□□ 1.62
SPRYD3-202ENST00000537540 ADAMTS2O95450 1211 aa25.18■■□□□ 1.62
SPRYD3-202ENST00000537540 XPCQ01831 940 aaPredicted RBP25.18■■□□□ 1.62
SPRYD3-202ENST00000537540 SAFB2Q14151 953 aaKnown RBP eCLIP25.18■■□□□ 1.62
SPRYD3-202ENST00000537540 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
SPRYD3-202ENST00000537540 NGLY1Q96IV0 654 aa25.17■■□□□ 1.62
SPRYD3-202ENST00000537540 CDK12Q9NYV4 1490 aaPredicted RBP25.15■■□□□ 1.62
SPRYD3-202ENST00000537540 RBM6P78332 1123 aaKnown RBP25.14■■□□□ 1.62
SPRYD3-202ENST00000537540 MARF1Q9Y4F3 1742 aaKnown RBP25.14■■□□□ 1.61
SPRYD3-202ENST00000537540 POGKQ9P215 609 aa25.13■■□□□ 1.61
SPRYD3-202ENST00000537540 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
SPRYD3-202ENST00000537540 ADGRB2O60241 1585 aa25.12■■□□□ 1.61
SPRYD3-202ENST00000537540 STAC3Q96MF2 364 aa25.11■■□□□ 1.61
SPRYD3-202ENST00000537540 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
SPRYD3-202ENST00000537540 ARHGEF28Q8N1W1 1705 aaKnown RBP25.09■■□□□ 1.61
SPRYD3-202ENST00000537540 USP21Q9UK80 565 aa25.08■■□□□ 1.61
SPRYD3-202ENST00000537540 FNBP4Q8N3X1 1017 aaPredicted RBP25.07■■□□□ 1.6
SPRYD3-202ENST00000537540 PHF8Q9UPP1 1060 aa25.07■■□□□ 1.6
SPRYD3-202ENST00000537540 HIRIP3Q9BW71 556 aaPredicted RBP25.06■■□□□ 1.6
SPRYD3-202ENST00000537540 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
SPRYD3-202ENST00000537540 MINK1Q8N4C8 1332 aaPredicted RBP25.05■■□□□ 1.6
SPRYD3-202ENST00000537540 RGS12O14924 1447 aa25.04■■□□□ 1.6
SPRYD3-202ENST00000537540 KIAA1210Q9ULL0 1709 aa25.04■■□□□ 1.6
SPRYD3-202ENST00000537540 SPATA31A3Q5VYP0 1347 aa25.04■■□□□ 1.6
SPRYD3-202ENST00000537540 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
SPRYD3-202ENST00000537540 TRPC5Q9UL62 973 aaPredicted RBP25.03■■□□□ 1.6
SPRYD3-202ENST00000537540 TNS3Q68CZ2 1445 aa25.01■■□□□ 1.59
SPRYD3-202ENST00000537540 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
SPRYD3-202ENST00000537540 TULP4Q9NRJ4 1543 aa24.99■■□□□ 1.59
SPRYD3-202ENST00000537540 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
SPRYD3-202ENST00000537540 PSME1Q06323 249 aa24.98■■□□□ 1.59
SPRYD3-202ENST00000537540 PRR36Q9H6K5 1346 aa24.97■■□□□ 1.59
SPRYD3-202ENST00000537540 TRPM3Q9HCF6 1732 aaPredicted RBP24.97■■□□□ 1.59
SPRYD3-202ENST00000537540 ATRNO75882 1429 aa24.96■■□□□ 1.59
SPRYD3-202ENST00000537540 EIF3AQ14152 1382 aaKnown RBP24.96■■□□□ 1.59
SPRYD3-202ENST00000537540 ITSN1Q15811 1721 aa24.96■■□□□ 1.59
SPRYD3-202ENST00000537540 WASLO00401 505 aaPredicted RBP24.96■■□□□ 1.59
SPRYD3-202ENST00000537540 SBNO1A3KN83 1393 aa24.95■■□□□ 1.59
SPRYD3-202ENST00000537540 BCL9LQ86UU0 1499 aa24.95■■□□□ 1.58
SPRYD3-202ENST00000537540 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.95■■□□□ 1.58
SPRYD3-202ENST00000537540 PLEKHG5O94827 1062 aa24.93■■□□□ 1.58
SPRYD3-202ENST00000537540 LMOD2Q6P5Q4 547 aa24.93■■□□□ 1.58
SPRYD3-202ENST00000537540 CABLES1Q8TDN4 633 aa24.92■■□□□ 1.58
SPRYD3-202ENST00000537540 ALS2Q96Q42 1657 aa24.91■■□□□ 1.58
SPRYD3-202ENST00000537540 NBPF1Q3BBV0 1214 aa24.91■■□□□ 1.58
SPRYD3-202ENST00000537540 ARHGEF10O15013 1369 aa24.91■■□□□ 1.58
SPRYD3-202ENST00000537540 HAP1P54257 671 aaPredicted RBP24.9■■□□□ 1.58
SPRYD3-202ENST00000537540 PLCH1Q4KWH8 1693 aa24.9■■□□□ 1.58
SPRYD3-202ENST00000537540 ATP7BP35670 1465 aa24.89■■□□□ 1.58
SPRYD3-202ENST00000537540 SLIT2O94813 1529 aa24.89■■□□□ 1.57
SPRYD3-202ENST00000537540 ATAD2Q6PL18 1390 aa24.89■■□□□ 1.57
SPRYD3-202ENST00000537540 GJD4Q96KN9 370 aaPredicted RBP24.88■■□□□ 1.57
SPRYD3-202ENST00000537540 GPRASP1Q5JY77 1395 aa24.88■■□□□ 1.57
SPRYD3-202ENST00000537540 SIN3AQ96ST3 1273 aa24.87■■□□□ 1.57
SPRYD3-202ENST00000537540 TOPAZ1Q8N9V7 1692 aa24.86■■□□□ 1.57
SPRYD3-202ENST00000537540 UNC5CLQ8IV45 518 aa24.85■■□□□ 1.57
SPRYD3-202ENST00000537540 NGDNQ8NEJ9 315 aaKnown RBP24.85■■□□□ 1.57
SPRYD3-202ENST00000537540 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
SPRYD3-202ENST00000537540 NWD2Q9ULI1 1742 aa24.85■■□□□ 1.57
SPRYD3-202ENST00000537540 NUDT16Q96DE0 195 aaKnown RBP24.84■■□□□ 1.57
SPRYD3-202ENST00000537540 CDK19Q9BWU1 502 aa24.84■■□□□ 1.57
SPRYD3-202ENST00000537540 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.57
SPRYD3-202ENST00000537540 GLI3P10071 1580 aa24.83■■□□□ 1.57
SPRYD3-202ENST00000537540 CRYBG1Q9Y4K1 1723 aa24.83■■□□□ 1.57
SPRYD3-202ENST00000537540 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.56
SPRYD3-202ENST00000537540 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
SPRYD3-202ENST00000537540 RALGAPBQ86X10 1494 aa24.8■■□□□ 1.56
SPRYD3-202ENST00000537540 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms