RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, human

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGA2-208	ENST00000537429	RBM33	Q96EV2	1170 aa	Known RBP	34.05	■■■■□ 3.04
HMGA2-208	ENST00000537429	LRRC7	Q96NW7	1537 aa		34.05	■■■■□ 3.04
HMGA2-208	ENST00000537429	TMEM94	Q12767	1356 aa		34.03	■■■■□ 3.04
HMGA2-208	ENST00000537429	NCOA3	Q9Y6Q9	1424 aa		34.02	■■■■□ 3.04
HMGA2-208	ENST00000537429	MINK1	Q8N4C8	1332 aa	Predicted RBP	34.01	■■■■□ 3.03
HMGA2-208	ENST00000537429	C14orf37	Q86TY3	774 aa		33.99	■■■■□ 3.03
HMGA2-208	ENST00000537429	SLC24A1	O60721	1099 aa		33.99	■■■■□ 3.03
HMGA2-208	ENST00000537429	XIRP1	Q702N8	1843 aa	Known RBP	33.98	■■■■□ 3.03
HMGA2-208	ENST00000537429	NALCN	Q8IZF0	1738 aa		33.98	■■■■□ 3.03
HMGA2-208	ENST00000537429	ADGRB2	O60241	1585 aa		33.97	■■■■□ 3.03
HMGA2-208	ENST00000537429	ADGRL3	Q9HAR2	1447 aa		33.97	■■■■□ 3.03
HMGA2-208	ENST00000537429	TULP4	Q9NRJ4	1543 aa		33.92	■■■■□ 3.02
HMGA2-208	ENST00000537429	TMF1	P82094	1093 aa		33.92	■■■■□ 3.02
HMGA2-208	ENST00000537429	C19orf44	Q9H6X5	657 aa		33.91	■■■■□ 3.02
HMGA2-208	ENST00000537429	EVC2	Q86UK5	1308 aa		33.91	■■■■□ 3.02
HMGA2-208	ENST00000537429	DISP3	Q9P2K9	1392 aa		33.89	■■■■□ 3.02
HMGA2-208	ENST00000537429	WASL	O00401	505 aa	Predicted RBP	33.89	■■■■□ 3.02
HMGA2-208	ENST00000537429	CDC42BPG	Q6DT37	1551 aa		33.88	■■■■□ 3.01
HMGA2-208	ENST00000537429	C11orf95	C9JLR9	678 aa	Predicted RBP	33.88	■■■■□ 3.01
HMGA2-208	ENST00000537429	CDK19	Q9BWU1	502 aa		33.87	■■■■□ 3.01
HMGA2-208	ENST00000537429	MSH6	P52701	1360 aa		33.85	■■■■□ 3.01
HMGA2-208	ENST00000537429	DCC	P43146	1447 aa		33.84	■■■■□ 3.01
HMGA2-208	ENST00000537429	CDCA8	Q53HL2	280 aa		33.81	■■■■□ 3
HMGA2-208	ENST00000537429	PUS7	Q96PZ0	661 aa	Known RBP	33.81	■■■■□ 3
HMGA2-208	ENST00000537429	FMN2	Q9NZ56	1722 aa		33.8	■■■■□ 3
HMGA2-208	ENST00000537429	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.8	■■■■□ 3
HMGA2-208	ENST00000537429	SRPK2	P78362	688 aa	Known RBP	33.8	■■■■□ 3
HMGA2-208	ENST00000537429	CABP2	Q9NPB3	220 aa		33.8	■■■■□ 3
HMGA2-208	ENST00000537429	ATF3	P18847	181 aa		33.78	■■■■□ 3
HMGA2-208	ENST00000537429	KIF7	Q2M1P5	1343 aa		33.77	■■■■□ 3
HMGA2-208	ENST00000537429	CADPS2	Q86UW7	1296 aa		33.77	■■■■□ 3
HMGA2-208	ENST00000537429	WASHC2A	Q641Q2	1341 aa		33.77	■■■■□ 3
HMGA2-208	ENST00000537429	CCDC7	Q96M83	1385 aa		33.75	■■■□□ 2.99
HMGA2-208	ENST00000537429	PRR36	Q9H6K5	1346 aa		33.74	■■■□□ 2.99
HMGA2-208	ENST00000537429	ATP7B	P35670	1465 aa		33.74	■■■□□ 2.99
HMGA2-208	ENST00000537429	NUTM2F	A1L443	756 aa		33.74	■■■□□ 2.99
HMGA2-208	ENST00000537429	CERK	Q8TCT0	537 aa		33.74	■■■□□ 2.99
HMGA2-208	ENST00000537429	USP32	Q8NFA0	1604 aa		33.73	■■■□□ 2.99
HMGA2-208	ENST00000537429	ANKAR	Q7Z5J8	1434 aa		33.73	■■■□□ 2.99
HMGA2-208	ENST00000537429	NUDT16	Q96DE0	195 aa	Known RBP	33.73	■■■□□ 2.99
HMGA2-208	ENST00000537429	ATAD2	Q6PL18	1390 aa		33.72	■■■□□ 2.99
HMGA2-208	ENST00000537429	IQSEC2	Q5JU85	1478 aa		33.72	■■■□□ 2.99
HMGA2-208	ENST00000537429	MST1R	Q04912	1400 aa		33.7	■■■□□ 2.99
HMGA2-208	ENST00000537429	POLR3GL	Q9BT43	218 aa		33.69	■■■□□ 2.98
HMGA2-208	ENST00000537429	CCDC61	Q9Y6R9	512 aa		33.69	■■■□□ 2.98
HMGA2-208	ENST00000537429	RGPD8	O14715	1765 aa	Predicted RBP	33.68	■■■□□ 2.98
HMGA2-208	ENST00000537429	C1orf167	Q5SNV9	1468 aa		33.66	■■■□□ 2.98
HMGA2-208	ENST00000537429	TOPAZ1	Q8N9V7	1692 aa		33.65	■■■□□ 2.98
HMGA2-208	ENST00000537429	ITSN1	Q15811	1721 aa		33.63	■■■□□ 2.97
HMGA2-208	ENST00000537429	SLAIN2	Q9P270	581 aa		33.63	■■■□□ 2.97
HMGA2-208	ENST00000537429	MYOM1	P52179	1685 aa		33.62	■■■□□ 2.97
HMGA2-208	ENST00000537429	PPIP5K1	Q6PFW1	1433 aa		33.62	■■■□□ 2.97
HMGA2-208	ENST00000537429	CABP1	Q9NZU7	370 aa		33.61	■■■□□ 2.97
HMGA2-208	ENST00000537429	NINL	Q9Y2I6	1382 aa		33.61	■■■□□ 2.97
HMGA2-208	ENST00000537429	SLC12A5	Q9H2X9	1139 aa		33.6	■■■□□ 2.97
HMGA2-208	ENST00000537429	TMC1	Q8TDI8	760 aa		33.59	■■■□□ 2.97
HMGA2-208	ENST00000537429	ESCO1	Q5FWF5	840 aa		33.58	■■■□□ 2.97
HMGA2-208	ENST00000537429	ORAI2	Q96SN7	254 aa		33.58	■■■□□ 2.97
HMGA2-208	ENST00000537429	PLEKHG3	A1L390	1219 aa		33.58	■■■□□ 2.97
HMGA2-208	ENST00000537429	TOM1	O60784	492 aa		33.58	■■■□□ 2.97
HMGA2-208	ENST00000537429	UBAP1L	F5GYI3	381 aa		33.57	■■■□□ 2.96
HMGA2-208	ENST00000537429	PHF8	Q9UPP1	1060 aa		33.54	■■■□□ 2.96
HMGA2-208	ENST00000537429	PMFBP1	Q8TBY8	1022 aa		33.53	■■■□□ 2.96
HMGA2-208	ENST00000537429	CD163L1	Q9NR16	1453 aa		33.52	■■■□□ 2.96
HMGA2-208	ENST00000537429	BRINP3	Q76B58	766 aa		33.5	■■■□□ 2.95
HMGA2-208	ENST00000537429	KIF1A	Q12756	1690 aa		33.5	■■■□□ 2.95
HMGA2-208	ENST00000537429	ACE	P12821	1306 aa		33.5	■■■□□ 2.95
HMGA2-208	ENST00000537429	POLR3A	O14802	1390 aa	Predicted RBP	33.5	■■■□□ 2.95
HMGA2-208	ENST00000537429	CPSF1	Q10570	1443 aa	Known RBP	33.49	■■■□□ 2.95
HMGA2-208	ENST00000537429	SCAF1	Q9H7N4	1312 aa	Known RBP	33.48	■■■□□ 2.95
HMGA2-208	ENST00000537429	ANKRD36B	Q8N2N9	1353 aa		33.48	■■■□□ 2.95
HMGA2-208	ENST00000537429	PIP4K2B	P78356	416 aa		33.48	■■■□□ 2.95
HMGA2-208	ENST00000537429	TERF2IP	Q9NYB0	399 aa		33.48	■■■□□ 2.95
HMGA2-208	ENST00000537429	DDX10	Q13206	875 aa	Known RBP	33.47	■■■□□ 2.95
HMGA2-208	ENST00000537429	PANK3	Q9H999	370 aa		33.47	■■■□□ 2.95
HMGA2-208	ENST00000537429		A0A1W2PP64	1363 aa		33.46	■■■□□ 2.95
HMGA2-208	ENST00000537429	NGDN	Q8NEJ9	315 aa	Known RBP	33.46	■■■□□ 2.95
HMGA2-208	ENST00000537429	AKAP12	Q02952	1782 aa		33.44	■■■□□ 2.94
HMGA2-208	ENST00000537429	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.44	■■■□□ 2.94
HMGA2-208	ENST00000537429	ZNF692	Q9BU19	519 aa	Predicted RBP	33.44	■■■□□ 2.94
HMGA2-208	ENST00000537429	FOXO3	O43524	673 aa		33.43	■■■□□ 2.94
HMGA2-208	ENST00000537429	ROBO1	Q9Y6N7	1651 aa		33.42	■■■□□ 2.94
HMGA2-208	ENST00000537429	CARD14	Q9BXL6	1004 aa		33.4	■■■□□ 2.94
HMGA2-208	ENST00000537429	MON2	Q7Z3U7	1717 aa		33.39	■■■□□ 2.94
HMGA2-208	ENST00000537429	KTN1	Q86UP2	1357 aa	Known RBP	33.39	■■■□□ 2.94
HMGA2-208	ENST00000537429	USP6	P35125	1406 aa		33.39	■■■□□ 2.94
HMGA2-208	ENST00000537429	NPHP3	Q7Z494	1330 aa		33.37	■■■□□ 2.93
HMGA2-208	ENST00000537429	PSME1	Q06323	249 aa		33.37	■■■□□ 2.93
HMGA2-208	ENST00000537429	DDX17	Q92841	729 aa	Known RBP	33.36	■■■□□ 2.93
HMGA2-208	ENST00000537429	PER1	O15534	1290 aa	Predicted RBP	33.35	■■■□□ 2.93
HMGA2-208	ENST00000537429	NHSL1	Q5SYE7	1610 aa		33.35	■■■□□ 2.93
HMGA2-208	ENST00000537429	SSH2	Q76I76	1423 aa		33.34	■■■□□ 2.93
HMGA2-208	ENST00000537429	EDC4	Q6P2E9	1401 aa	Known RBP	33.33	■■■□□ 2.93
HMGA2-208	ENST00000537429	NRK	Q7Z2Y5	1582 aa		33.33	■■■□□ 2.93
HMGA2-208	ENST00000537429	NSD3	Q9BZ95	1437 aa		33.33	■■■□□ 2.93
HMGA2-208	ENST00000537429	KRT28	Q7Z3Y7	464 aa		33.33	■■■□□ 2.93
HMGA2-208	ENST00000537429	BRD4	O60885	1362 aa	Predicted RBP	33.31	■■■□□ 2.92
HMGA2-208	ENST00000537429	PXDN	Q92626	1479 aa		33.3	■■■□□ 2.92
HMGA2-208	ENST00000537429	XPC	Q01831	940 aa	Predicted RBP	33.3	■■■□□ 2.92
HMGA2-208	ENST00000537429	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.3	■■■□□ 2.92

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