RNA–Protein interactions for RNA: ENST00000537218.1

TCHP-204, Transcript of trichoplein keratin filament binding, humanhuman

TSL 2

Gene TCHP, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-204ENST00000537218 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
TCHP-204ENST00000537218 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
TCHP-204ENST00000537218 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
TCHP-204ENST00000537218 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
TCHP-204ENST00000537218 CDC42BPGQ6DT37 1551 aa22.18■■□□□ 1.14
TCHP-204ENST00000537218 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
TCHP-204ENST00000537218 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
TCHP-204ENST00000537218 MST1RQ04912 1400 aa22.17■■□□□ 1.14
TCHP-204ENST00000537218 POGKQ9P215 609 aa22.17■■□□□ 1.14
TCHP-204ENST00000537218 RALGAPBQ86X10 1494 aa22.16■■□□□ 1.14
TCHP-204ENST00000537218 GPRASP1Q5JY77 1395 aa22.16■■□□□ 1.14
TCHP-204ENST00000537218 SAFB2Q14151 953 aaKnown RBP eCLIP22.15■■□□□ 1.14
TCHP-204ENST00000537218 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
TCHP-204ENST00000537218 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
TCHP-204ENST00000537218 C1orf167Q5SNV9 1468 aa22.11■■□□□ 1.13
TCHP-204ENST00000537218 HSPA1LP34931 641 aa22.09■■□□□ 1.13
TCHP-204ENST00000537218 MINK1Q8N4C8 1332 aaPredicted RBP22.08■■□□□ 1.13
TCHP-204ENST00000537218 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
TCHP-204ENST00000537218 FMN2Q9NZ56 1722 aa22.07■■□□□ 1.12
TCHP-204ENST00000537218 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
TCHP-204ENST00000537218 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
TCHP-204ENST00000537218 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
TCHP-204ENST00000537218 EIF3AQ14152 1382 aaKnown RBP22.06■■□□□ 1.12
TCHP-204ENST00000537218 AHDC1Q5TGY3 1603 aaPredicted RBP22.02■■□□□ 1.12
TCHP-204ENST00000537218 NUTM2FA1L443 756 aa22.02■■□□□ 1.12
TCHP-204ENST00000537218 WASLO00401 505 aaPredicted RBP22.02■■□□□ 1.12
TCHP-204ENST00000537218 ORAI2Q96SN7 254 aa22.02■■□□□ 1.12
TCHP-204ENST00000537218 QRICH2Q9H0J4 1663 aa22.01■■□□□ 1.11
TCHP-204ENST00000537218 ANKARQ7Z5J8 1434 aa22.01■■□□□ 1.11
TCHP-204ENST00000537218 TULP4Q9NRJ4 1543 aa22■■□□□ 1.11
TCHP-204ENST00000537218 ESCO1Q5FWF5 840 aa21.99■■□□□ 1.11
TCHP-204ENST00000537218 PHLPP1O60346 1717 aa21.98■■□□□ 1.11
TCHP-204ENST00000537218 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
TCHP-204ENST00000537218 USP32Q8NFA0 1604 aa21.98■■□□□ 1.11
TCHP-204ENST00000537218 COL16A1Q07092 1604 aaPredicted RBP21.97■■□□□ 1.11
TCHP-204ENST00000537218 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
TCHP-204ENST00000537218 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
TCHP-204ENST00000537218 SBNO2Q9Y2G9 1366 aa21.95■■□□□ 1.1
TCHP-204ENST00000537218 ATP7BP35670 1465 aa21.95■■□□□ 1.1
TCHP-204ENST00000537218 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
TCHP-204ENST00000537218 KIF1AQ12756 1690 aa21.94■■□□□ 1.1
TCHP-204ENST00000537218 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
TCHP-204ENST00000537218 USP47Q96K76 1375 aa21.92■■□□□ 1.1
TCHP-204ENST00000537218 NPHP3Q7Z494 1330 aa21.92■■□□□ 1.1
TCHP-204ENST00000537218 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
TCHP-204ENST00000537218 SOS2Q07890 1332 aaPredicted RBP21.9■■□□□ 1.1
TCHP-204ENST00000537218 EVC2Q86UK5 1308 aa21.9■■□□□ 1.1
TCHP-204ENST00000537218 FOXO3O43524 673 aa21.9■■□□□ 1.1
TCHP-204ENST00000537218 NUDT16Q96DE0 195 aaKnown RBP21.9■■□□□ 1.1
TCHP-204ENST00000537218 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
TCHP-204ENST00000537218 PXDNQ92626 1479 aa21.89■■□□□ 1.09
TCHP-204ENST00000537218 JCADQ9P266 1359 aa21.88■■□□□ 1.09
TCHP-204ENST00000537218 ST20-MTHFSA0A0A6YYL1 179 aa21.88■■□□□ 1.09
TCHP-204ENST00000537218 CABP2Q9NPB3 220 aa21.88■■□□□ 1.09
TCHP-204ENST00000537218 TOPAZ1Q8N9V7 1692 aa21.88■■□□□ 1.09
TCHP-204ENST00000537218 ITSN1Q15811 1721 aa21.87■■□□□ 1.09
TCHP-204ENST00000537218 PMFBP1Q8TBY8 1022 aa21.86■■□□□ 1.09
TCHP-204ENST00000537218 TESK2Q96S53 571 aa21.86■■□□□ 1.09
TCHP-204ENST00000537218 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
TCHP-204ENST00000537218 LRRC59Q96AG4 307 aaKnown RBP21.85■■□□□ 1.09
TCHP-204ENST00000537218 XPCQ01831 940 aaPredicted RBP21.84■■□□□ 1.09
TCHP-204ENST00000537218 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
TCHP-204ENST00000537218 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
TCHP-204ENST00000537218 PLEKHG3A1L390 1219 aa21.81■■□□□ 1.08
TCHP-204ENST00000537218 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
TCHP-204ENST00000537218 POLR3AO14802 1390 aaPredicted RBP21.81■■□□□ 1.08
TCHP-204ENST00000537218 ATAD2Q6PL18 1390 aa21.81■■□□□ 1.08
TCHP-204ENST00000537218 PNPLA6Q8IY17 1366 aa21.81■■□□□ 1.08
TCHP-204ENST00000537218 SLC24A1O60721 1099 aa21.8■■□□□ 1.08
TCHP-204ENST00000537218 NGDNQ8NEJ9 315 aaKnown RBP21.8■■□□□ 1.08
TCHP-204ENST00000537218 PSME1Q06323 249 aa21.79■■□□□ 1.08
TCHP-204ENST00000537218 SBNO1A3KN83 1393 aa21.78■■□□□ 1.08
TCHP-204ENST00000537218 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
TCHP-204ENST00000537218 ACEP12821 1306 aa21.78■■□□□ 1.08
TCHP-204ENST00000537218 SPATA31A6Q5VVP1 1343 aa21.78■■□□□ 1.08
TCHP-204ENST00000537218 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
TCHP-204ENST00000537218 TNS3Q68CZ2 1445 aa21.77■■□□□ 1.08
TCHP-204ENST00000537218 SPATA31A3Q5VYP0 1347 aa21.77■■□□□ 1.07
TCHP-204ENST00000537218 PUS7Q96PZ0 661 aaKnown RBP21.76■■□□□ 1.07
TCHP-204ENST00000537218 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
TCHP-204ENST00000537218 DISP3Q9P2K9 1392 aa21.75■■□□□ 1.07
TCHP-204ENST00000537218 TRPM3Q9HCF6 1732 aaPredicted RBP21.75■■□□□ 1.07
TCHP-204ENST00000537218 TMF1P82094 1093 aa21.75■■□□□ 1.07
TCHP-204ENST00000537218 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
TCHP-204ENST00000537218 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
TCHP-204ENST00000537218 LRP6O75581 1613 aa21.73■■□□□ 1.07
TCHP-204ENST00000537218 ARHGEF10O15013 1369 aa21.71■■□□□ 1.07
TCHP-204ENST00000537218 USP6P35125 1406 aa21.7■■□□□ 1.06
TCHP-204ENST00000537218 ALS2Q96Q42 1657 aa21.69■■□□□ 1.06
TCHP-204ENST00000537218 NUTM2BA6NNL0 878 aaPredicted RBP21.68■■□□□ 1.06
TCHP-204ENST00000537218 NUTM2EB1AL46 878 aaPredicted RBP21.68■■□□□ 1.06
TCHP-204ENST00000537218 CDCA8Q53HL2 280 aa21.68■■□□□ 1.06
TCHP-204ENST00000537218 NUTM2AQ8IVF1 878 aaPredicted RBP21.68■■□□□ 1.06
TCHP-204ENST00000537218 BRD4O60885 1362 aaPredicted RBP21.68■■□□□ 1.06
TCHP-204ENST00000537218 NINLQ9Y2I6 1382 aa21.68■■□□□ 1.06
TCHP-204ENST00000537218 CPSF1Q10570 1443 aaKnown RBP21.68■■□□□ 1.06
TCHP-204ENST00000537218 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
TCHP-204ENST00000537218 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
TCHP-204ENST00000537218 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
TCHP-204ENST00000537218 CD163L1Q9NR16 1453 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms