RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 ZNF772Q68DY9 489 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-204ENST00000537068 ZBTB12Q9Y330 459 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-204ENST00000537068 METP08581 1390 aa8.04□□□□□ -1.12
SNHG1-204ENST00000537068 ASXL1Q8IXJ9 1541 aa8.03□□□□□ -1.12
SNHG1-204ENST00000537068 CDK12Q9NYV4 1490 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-204ENST00000537068 RRBP1Q9P2E9 1410 aaKnown RBP8.03□□□□□ -1.12
SNHG1-204ENST00000537068 C14orf37Q86TY3 774 aa8.02□□□□□ -1.13
SNHG1-204ENST00000537068 NAIPQ13075 1403 aa8.02□□□□□ -1.13
SNHG1-204ENST00000537068 PRAG1Q86YV5 1406 aa8.02□□□□□ -1.13
SNHG1-204ENST00000537068 ADGRL3Q9HAR2 1447 aa8.02□□□□□ -1.13
SNHG1-204ENST00000537068 PPLO60437 1756 aa8.02□□□□□ -1.13
SNHG1-204ENST00000537068 UPF1Q92900 1129 aaKnown RBP eCLIP8.01□□□□□ -1.131e-26■□□□□ 8.6
SNHG1-204ENST00000537068 LRRC59Q96AG4 307 aaKnown RBP8.01□□□□□ -1.13
SNHG1-204ENST00000537068 RXRBP28702 533 aa7.99□□□□□ -1.13
SNHG1-204ENST00000537068 ITGAEP38570 1179 aa7.99□□□□□ -1.13
SNHG1-204ENST00000537068 VASPP50552 380 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-204ENST00000537068 PTCH1Q13635 1447 aa7.99□□□□□ -1.13
SNHG1-204ENST00000537068 ZNF326Q5BKZ1 582 aaKnown RBP7.99□□□□□ -1.13
SNHG1-204ENST00000537068 CHRDL2Q6WN34 429 aa7.99□□□□□ -1.13
SNHG1-204ENST00000537068 C1orf167Q5SNV9 1468 aa7.99□□□□□ -1.13
SNHG1-204ENST00000537068 RPGRIP1LQ68CZ1 1315 aa7.99□□□□□ -1.13
SNHG1-204ENST00000537068 PNPLA6Q8IY17 1366 aa7.98□□□□□ -1.13
SNHG1-204ENST00000537068 VGFO15240 615 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-204ENST00000537068 MEX3CQ5U5Q3 659 aaKnown RBP7.98□□□□□ -1.13
SNHG1-204ENST00000537068 AKT1S1Q96B36 256 aa7.98□□□□□ -1.13
SNHG1-204ENST00000537068 COL22A1Q8NFW1 1626 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-204ENST00000537068 AFF2P51816 1311 aa7.98□□□□□ -1.13
SNHG1-204ENST00000537068 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-204ENST00000537068 IFT172Q9UG01 1749 aa7.98□□□□□ -1.13
SNHG1-204ENST00000537068 MARF1Q9Y4F3 1742 aaKnown RBP7.98□□□□□ -1.13
SNHG1-204ENST00000537068 HFM1A2PYH4 1435 aa7.97□□□□□ -1.13
SNHG1-204ENST00000537068 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
SNHG1-204ENST00000537068 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-204ENST00000537068 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-204ENST00000537068 PPARGC1BQ86YN6 1023 aaKnown RBP7.96□□□□□ -1.14
SNHG1-204ENST00000537068 NUTM2AQ8IVF1 878 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-204ENST00000537068 DDX17Q92841 729 aaKnown RBP7.96□□□□□ -1.14
SNHG1-204ENST00000537068 RBM6P78332 1123 aaKnown RBP7.95□□□□□ -1.14
SNHG1-204ENST00000537068 TRIM52Q96A61 297 aa7.95□□□□□ -1.14
SNHG1-204ENST00000537068 ORAI2Q96SN7 254 aa7.95□□□□□ -1.14
SNHG1-204ENST00000537068 QTRT2Q9H974 415 aaKnown RBP7.95□□□□□ -1.14
SNHG1-204ENST00000537068 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
SNHG1-204ENST00000537068 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
SNHG1-204ENST00000537068 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-204ENST00000537068 RGS12O14924 1447 aa7.94□□□□□ -1.14
SNHG1-204ENST00000537068 TECPR2O15040 1411 aa7.94□□□□□ -1.14
SNHG1-204ENST00000537068 SPATA31E1Q6ZUB1 1445 aa7.93□□□□□ -1.14
SNHG1-204ENST00000537068 PXDNQ92626 1479 aa7.93□□□□□ -1.14
SNHG1-204ENST00000537068 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.92□□□□□ -1.14
SNHG1-204ENST00000537068 RGPD8O14715 1765 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-204ENST00000537068 IFNLR1Q8IU57 520 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-204ENST00000537068 C8orf37Q96NL8 207 aa7.92□□□□□ -1.14
SNHG1-204ENST00000537068 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
SNHG1-204ENST00000537068 NGLY1Q96IV0 654 aa7.91□□□□□ -1.14
SNHG1-204ENST00000537068 ADGRF5Q8IZF2 1346 aa7.91□□□□□ -1.14
SNHG1-204ENST00000537068 ABCC11Q96J66 1382 aa7.91□□□□□ -1.14
SNHG1-204ENST00000537068 ATRNO75882 1429 aa7.91□□□□□ -1.14
SNHG1-204ENST00000537068 MYOM2P54296 1465 aa7.91□□□□□ -1.14
SNHG1-204ENST00000537068 BCL9LQ86UU0 1499 aa7.9□□□□□ -1.14
SNHG1-204ENST00000537068 NPHP3Q7Z494 1330 aa7.9□□□□□ -1.14
SNHG1-204ENST00000537068 SIRT1Q96EB6 747 aa7.9□□□□□ -1.14
SNHG1-204ENST00000537068 ZNF692Q9BU19 519 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-204ENST00000537068 PIK3C2GO75747 1445 aa7.89□□□□□ -1.15
SNHG1-204ENST00000537068 LRPPRCP42704 1394 aaKnown RBP7.89□□□□□ -1.15
SNHG1-204ENST00000537068 ANKRD30BQ9BXX2 1392 aa7.89□□□□□ -1.15
SNHG1-204ENST00000537068 ADAMTS2O95450 1211 aa7.89□□□□□ -1.15
SNHG1-204ENST00000537068 REM2Q8IYK8 340 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-204ENST00000537068 USP21Q9UK80 565 aa7.89□□□□□ -1.15
SNHG1-204ENST00000537068 TRPC5Q9UL62 973 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-204ENST00000537068 KIF1AQ12756 1690 aa7.89□□□□□ -1.15
SNHG1-204ENST00000537068 NRXN1Q9ULB1 1477 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 CCDC144AA2RUR9 1427 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 BRWD3Q6RI45 1802 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 FOXO3O43524 673 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 ESCO1Q5FWF5 840 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 WAPLQ7Z5K2 1190 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 SLIT2O94813 1529 aa7.88□□□□□ -1.15
SNHG1-204ENST00000537068 ATAD2Q6PL18 1390 aa7.87□□□□□ -1.15
SNHG1-204ENST00000537068 MPHOSPH9Q99550 1183 aa7.87□□□□□ -1.15
SNHG1-204ENST00000537068 YTHDC2Q9H6S0 1430 aaKnown RBP7.86□□□□□ -1.15
SNHG1-204ENST00000537068 PLEKHH1Q9ULM0 1364 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 SPATA31A3Q5VYP0 1347 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
SNHG1-204ENST00000537068 GLI3P10071 1580 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 RGL3Q3MIN7 710 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 TMEM132EQ6IEE7 984 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 CCDC125Q86Z20 511 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-204ENST00000537068 C14orf93Q9H972 538 aaKnown RBP7.86□□□□□ -1.15
SNHG1-204ENST00000537068 ABCA3Q99758 1704 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 NWD2Q9ULI1 1742 aa7.86□□□□□ -1.15
SNHG1-204ENST00000537068 USP32Q8NFA0 1604 aa7.85□□□□□ -1.15
SNHG1-204ENST00000537068 PLCH1Q4KWH8 1693 aa7.84□□□□□ -1.15
SNHG1-204ENST00000537068 ONECUT3O60422 494 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-204ENST00000537068 STK26Q9P289 416 aa7.84□□□□□ -1.15
SNHG1-204ENST00000537068 TRPM3Q9HCF6 1732 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-204ENST00000537068 DLC1Q96QB1 1528 aa7.83□□□□□ -1.16
SNHG1-204ENST00000537068 EP400Q96L91 3159 aa7.83□□□□□ -1.16
SNHG1-204ENST00000537068 SPDYE2BA6NHP3 402 aa7.83□□□□□ -1.16
SNHG1-204ENST00000537068 SPDYE6P0CI01 402 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms