RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 ESCO1Q5FWF5 840 aa28.73■■■□□ 2.19
USP30-209ENST00000536723 NPHP3Q7Z494 1330 aa28.72■■■□□ 2.19
USP30-209ENST00000536723 SPHKAPQ2M3C7 1700 aa28.72■■■□□ 2.19
USP30-209ENST00000536723 XPCQ01831 940 aaPredicted RBP28.71■■■□□ 2.19
USP30-209ENST00000536723 FOXO3O43524 673 aa28.69■■■□□ 2.18
USP30-209ENST00000536723 UNC5CLQ8IV45 518 aa28.69■■■□□ 2.18
USP30-209ENST00000536723 PXDNQ92626 1479 aa28.68■■■□□ 2.18
USP30-209ENST00000536723 RALGAPBQ86X10 1494 aa28.67■■■□□ 2.18
USP30-209ENST00000536723 ITGAEP38570 1179 aa28.67■■■□□ 2.18
USP30-209ENST00000536723 HFM1A2PYH4 1435 aa28.66■■■□□ 2.18
USP30-209ENST00000536723 CLTCL1P53675 1640 aa28.65■■■□□ 2.18
USP30-209ENST00000536723 VGFO15240 615 aaPredicted RBP28.65■■■□□ 2.18
USP30-209ENST00000536723 SF3B2Q13435 895 aaKnown RBP28.65■■■□□ 2.18
USP30-209ENST00000536723 PRAG1Q86YV5 1406 aa28.65■■■□□ 2.18
USP30-209ENST00000536723 GLI3P10071 1580 aa28.65■■■□□ 2.18
USP30-209ENST00000536723 MARF1Q9Y4F3 1742 aaKnown RBP28.63■■■□□ 2.17
USP30-209ENST00000536723 SLIT2O94813 1529 aa28.62■■■□□ 2.17
USP30-209ENST00000536723 SEPT12Q8IYM1 358 aa28.61■■■□□ 2.17
USP30-209ENST00000536723 LRP5O75197 1615 aa28.6■■■□□ 2.17
USP30-209ENST00000536723 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.58■■■□□ 2.17
USP30-209ENST00000536723 LRPPRCP42704 1394 aaKnown RBP28.58■■■□□ 2.17
USP30-209ENST00000536723 NUTM2FA1L443 756 aa28.57■■■□□ 2.16
USP30-209ENST00000536723 PSDA5PKW4 1024 aaPredicted RBP28.57■■■□□ 2.16
USP30-209ENST00000536723 CDC42BPGQ6DT37 1551 aa28.55■■■□□ 2.16
USP30-209ENST00000536723 SPATA31A3Q5VYP0 1347 aa28.54■■■□□ 2.16
USP30-209ENST00000536723 BRWD3Q6RI45 1802 aa28.53■■■□□ 2.16
USP30-209ENST00000536723 HRCP23327 699 aa28.53■■■□□ 2.16
USP30-209ENST00000536723 ONECUT3O60422 494 aaPredicted RBP28.52■■■□□ 2.16
USP30-209ENST00000536723 VPS72Q15906 364 aa28.52■■■□□ 2.16
USP30-209ENST00000536723 RPGRIP1LQ68CZ1 1315 aa28.51■■■□□ 2.15
USP30-209ENST00000536723 KIF1BO60333 1816 aa28.51■■■□□ 2.15
USP30-209ENST00000536723 KRT27Q7Z3Y8 459 aa28.51■■■□□ 2.15
USP30-209ENST00000536723 NAIPQ13075 1403 aa28.51■■■□□ 2.15
USP30-209ENST00000536723 WAPLQ7Z5K2 1190 aa28.48■■■□□ 2.15
USP30-209ENST00000536723 CCDC9Q9Y3X0 531 aaKnown RBP28.47■■■□□ 2.15
USP30-209ENST00000536723 BAG6P46379 1132 aa28.46■■■□□ 2.15
USP30-209ENST00000536723 KRT28Q7Z3Y7 464 aa28.46■■■□□ 2.15
USP30-209ENST00000536723 USP32Q8NFA0 1604 aa28.45■■■□□ 2.14
USP30-209ENST00000536723 CABLES1Q8TDN4 633 aa28.45■■■□□ 2.14
USP30-209ENST00000536723 STK26Q9P289 416 aa28.45■■■□□ 2.14
USP30-209ENST00000536723 HAP1P54257 671 aaPredicted RBP28.44■■■□□ 2.14
USP30-209ENST00000536723 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
USP30-209ENST00000536723 PLEKHG5O94827 1062 aa28.41■■■□□ 2.14
USP30-209ENST00000536723 PLEKHH1Q9ULM0 1364 aa28.39■■■□□ 2.14
USP30-209ENST00000536723 EN1Q05925 392 aaPredicted RBP28.38■■■□□ 2.13
USP30-209ENST00000536723 TECPR2O15040 1411 aa28.37■■■□□ 2.13
USP30-209ENST00000536723 A0A0G2JS52 829 aa28.37■■■□□ 2.13
USP30-209ENST00000536723 MYT1Q01538 1121 aa28.37■■■□□ 2.13
USP30-209ENST00000536723 ADGRF5Q8IZF2 1346 aa28.37■■■□□ 2.13
USP30-209ENST00000536723 R3HDM1Q15032 1099 aaKnown RBP28.36■■■□□ 2.13
USP30-209ENST00000536723 PPLO60437 1756 aa28.35■■■□□ 2.13
USP30-209ENST00000536723 FAM83GA6ND36 823 aa28.35■■■□□ 2.13
USP30-209ENST00000536723 TNS3Q68CZ2 1445 aa28.35■■■□□ 2.13
USP30-209ENST00000536723 PSME1Q06323 249 aa28.34■■■□□ 2.13
USP30-209ENST00000536723 FAM98CQ17RN3 349 aaKnown RBP28.34■■■□□ 2.13
USP30-209ENST00000536723 ABCC11Q96J66 1382 aa28.34■■■□□ 2.13
USP30-209ENST00000536723 TMEM132EQ6IEE7 984 aa28.33■■■□□ 2.13
USP30-209ENST00000536723 KIF1AQ12756 1690 aa28.32■■■□□ 2.12
USP30-209ENST00000536723 PHF8Q9UPP1 1060 aa28.32■■■□□ 2.12
USP30-209ENST00000536723 PLCH1Q4KWH8 1693 aa28.32■■■□□ 2.12
USP30-209ENST00000536723 LMOD2Q6P5Q4 547 aa28.31■■■□□ 2.12
USP30-209ENST00000536723 FMN2Q9NZ56 1722 aa28.31■■■□□ 2.12
USP30-209ENST00000536723 NWD2Q9ULI1 1742 aa28.31■■■□□ 2.12
USP30-209ENST00000536723 FAM182BQ5T319 152 aa28.3■■■□□ 2.12
USP30-209ENST00000536723 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
USP30-209ENST00000536723 SBNO1A3KN83 1393 aa28.27■■■□□ 2.12
USP30-209ENST00000536723 SLC4A1APQ9BWU0 796 aaKnown RBP28.27■■■□□ 2.12
USP30-209ENST00000536723 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.12
USP30-209ENST00000536723 BTG4Q9NY30 223 aa28.25■■■□□ 2.11
USP30-209ENST00000536723 ARHGEF10O15013 1369 aa28.24■■■□□ 2.11
USP30-209ENST00000536723 RGL3Q3MIN7 710 aa28.24■■■□□ 2.11
USP30-209ENST00000536723 EZH2Q15910 746 aaKnown RBP28.23■■■□□ 2.11
USP30-209ENST00000536723 DISP2A7MBM2 1401 aa28.21■■■□□ 2.11
USP30-209ENST00000536723 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
USP30-209ENST00000536723 YY1P25490 414 aa28.21■■■□□ 2.11
USP30-209ENST00000536723 SIRT1Q96EB6 747 aa28.21■■■□□ 2.11
USP30-209ENST00000536723 NRXN1Q9ULB1 1477 aa28.21■■■□□ 2.11
USP30-209ENST00000536723 ABCA3Q99758 1704 aa28.2■■■□□ 2.1
USP30-209ENST00000536723 RGPD1P0DJD0 1748 aa28.19■■■□□ 2.1
USP30-209ENST00000536723 KNDC1Q76NI1 1749 aa28.19■■■□□ 2.1
USP30-209ENST00000536723 ANKRD30BQ9BXX2 1392 aa28.18■■■□□ 2.1
USP30-209ENST00000536723 NRAPQ86VF7 1730 aa28.18■■■□□ 2.1
USP30-209ENST00000536723 PMFBP1Q8TBY8 1022 aa28.17■■■□□ 2.1
USP30-209ENST00000536723 CAMKK2Q96RR4 588 aa28.17■■■□□ 2.1
USP30-209ENST00000536723 SPATA31A5Q5VU36 1347 aa28.17■■■□□ 2.1
USP30-209ENST00000536723 SPATA31A7Q8IWB4 1347 aa28.17■■■□□ 2.1
USP30-209ENST00000536723 RGPD8O14715 1765 aaPredicted RBP28.16■■■□□ 2.1
USP30-209ENST00000536723 PIK3C2GO75747 1445 aa28.15■■■□□ 2.1
USP30-209ENST00000536723 SPATA31E1Q6ZUB1 1445 aa28.14■■■□□ 2.1
USP30-209ENST00000536723 TRIM37O94972 964 aa28.12■■■□□ 2.09
USP30-209ENST00000536723 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
USP30-209ENST00000536723 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
USP30-209ENST00000536723 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
USP30-209ENST00000536723 PRAM1Q96QH2 718 aa28.08■■■□□ 2.09
USP30-209ENST00000536723 C14orf93Q9H972 538 aaKnown RBP28.08■■■□□ 2.09
USP30-209ENST00000536723 COL14A1Q05707 1796 aaKnown RBP28.08■■■□□ 2.09
USP30-209ENST00000536723 APBA3O96018 575 aa28.07■■■□□ 2.08
USP30-209ENST00000536723 FAM196AQ6ZSG2 479 aa28.07■■■□□ 2.08
USP30-209ENST00000536723 THSD7AQ9UPZ6 1657 aa28.07■■■□□ 2.08
USP30-209ENST00000536723 ANKARQ7Z5J8 1434 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms