RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
PRKDC-207ENST00000536483 LAMC1P11047 1609 aa18.46■□□□□ 0.55
PRKDC-207ENST00000536483 RGL3Q3MIN7 710 aa18.46■□□□□ 0.55
PRKDC-207ENST00000536483 RGS12O14924 1447 aa18.46■□□□□ 0.55
PRKDC-207ENST00000536483 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
PRKDC-207ENST00000536483 CCDC144AA2RUR9 1427 aa18.44■□□□□ 0.54
PRKDC-207ENST00000536483 STK26Q9P289 416 aa18.44■□□□□ 0.54
PRKDC-207ENST00000536483 SPATA31E1Q6ZUB1 1445 aa18.43■□□□□ 0.54
PRKDC-207ENST00000536483 WAPLQ7Z5K2 1190 aa18.43■□□□□ 0.54
PRKDC-207ENST00000536483 USP21Q9UK80 565 aa18.43■□□□□ 0.54
PRKDC-207ENST00000536483 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
PRKDC-207ENST00000536483 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
PRKDC-207ENST00000536483 FOXO3O43524 673 aa18.4■□□□□ 0.54
PRKDC-207ENST00000536483 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
PRKDC-207ENST00000536483 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
PRKDC-207ENST00000536483 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
PRKDC-207ENST00000536483 CDC42BPGQ6DT37 1551 aa18.39■□□□□ 0.53
PRKDC-207ENST00000536483 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
PRKDC-207ENST00000536483 LRPPRCP42704 1394 aaKnown RBP18.39■□□□□ 0.53
PRKDC-207ENST00000536483 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
PRKDC-207ENST00000536483 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
PRKDC-207ENST00000536483 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
PRKDC-207ENST00000536483 TECPR2O15040 1411 aa18.37■□□□□ 0.53
PRKDC-207ENST00000536483 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
PRKDC-207ENST00000536483 PXDNQ92626 1479 aa18.36■□□□□ 0.53
PRKDC-207ENST00000536483 MYOM2P54296 1465 aa18.35■□□□□ 0.53
PRKDC-207ENST00000536483 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
PRKDC-207ENST00000536483 ATRNO75882 1429 aa18.34■□□□□ 0.53
PRKDC-207ENST00000536483 IFT172Q9UG01 1749 aa18.33■□□□□ 0.52
PRKDC-207ENST00000536483 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
PRKDC-207ENST00000536483 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
PRKDC-207ENST00000536483 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
PRKDC-207ENST00000536483 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
PRKDC-207ENST00000536483 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
PRKDC-207ENST00000536483 SRCAPQ6ZRS2 3230 aa18.29■□□□□ 0.52
PRKDC-207ENST00000536483 SIRT1Q96EB6 747 aa18.29■□□□□ 0.52
PRKDC-207ENST00000536483 SPATA31A3Q5VYP0 1347 aa18.28■□□□□ 0.52
PRKDC-207ENST00000536483 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
PRKDC-207ENST00000536483 CFAP70Q5T0N1 1121 aa18.28■□□□□ 0.52
PRKDC-207ENST00000536483 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
PRKDC-207ENST00000536483 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
PRKDC-207ENST00000536483 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
PRKDC-207ENST00000536483 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
PRKDC-207ENST00000536483 EP400Q96L91 3159 aa18.27■□□□□ 0.51
PRKDC-207ENST00000536483 SAFB2Q14151 953 aaKnown RBP eCLIP18.25■□□□□ 0.51
PRKDC-207ENST00000536483 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
PRKDC-207ENST00000536483 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
PRKDC-207ENST00000536483 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
PRKDC-207ENST00000536483 UNC5CLQ8IV45 518 aa18.24■□□□□ 0.51
PRKDC-207ENST00000536483 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
PRKDC-207ENST00000536483 KIF1AQ12756 1690 aa18.24■□□□□ 0.51
PRKDC-207ENST00000536483 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
PRKDC-207ENST00000536483 PSME1Q06323 249 aa18.22■□□□□ 0.51
PRKDC-207ENST00000536483 CABLES1Q8TDN4 633 aa18.22■□□□□ 0.51
PRKDC-207ENST00000536483 SLIT2O94813 1529 aa18.22■□□□□ 0.51
PRKDC-207ENST00000536483 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
PRKDC-207ENST00000536483 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
PRKDC-207ENST00000536483 POGKQ9P215 609 aa18.2■□□□□ 0.5
PRKDC-207ENST00000536483 TNS3Q68CZ2 1445 aa18.2■□□□□ 0.5
PRKDC-207ENST00000536483 RALGAPBQ86X10 1494 aa18.2■□□□□ 0.5
PRKDC-207ENST00000536483 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
PRKDC-207ENST00000536483 CCDC125Q86Z20 511 aa18.19■□□□□ 0.5
PRKDC-207ENST00000536483 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
PRKDC-207ENST00000536483 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
PRKDC-207ENST00000536483 USP32Q8NFA0 1604 aa18.18■□□□□ 0.5
PRKDC-207ENST00000536483 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
PRKDC-207ENST00000536483 GLI3P10071 1580 aa18.17■□□□□ 0.5
PRKDC-207ENST00000536483 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
PRKDC-207ENST00000536483 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
PRKDC-207ENST00000536483 HIRIP3Q9BW71 556 aaPredicted RBP18.15■□□□□ 0.5
PRKDC-207ENST00000536483 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
PRKDC-207ENST00000536483 VPS72Q15906 364 aa18.14■□□□□ 0.49
PRKDC-207ENST00000536483 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
PRKDC-207ENST00000536483 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
PRKDC-207ENST00000536483 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
PRKDC-207ENST00000536483 ARHGEF10O15013 1369 aa18.14■□□□□ 0.49
PRKDC-207ENST00000536483 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
PRKDC-207ENST00000536483 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
PRKDC-207ENST00000536483 FAM83GA6ND36 823 aa18.12■□□□□ 0.49
PRKDC-207ENST00000536483 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
PRKDC-207ENST00000536483 MINK1Q8N4C8 1332 aaPredicted RBP18.12■□□□□ 0.49
PRKDC-207ENST00000536483 BLMP54132 1417 aaPredicted RBP18.11■□□□□ 0.49
PRKDC-207ENST00000536483 ADGRB2O60241 1585 aa18.1■□□□□ 0.49
PRKDC-207ENST00000536483 PRR36Q9H6K5 1346 aa18.1■□□□□ 0.49
PRKDC-207ENST00000536483 ONECUT3O60422 494 aaPredicted RBP18.1■□□□□ 0.49
PRKDC-207ENST00000536483 DEFB132Q7Z7B7 95 aa18.09■□□□□ 0.49
PRKDC-207ENST00000536483 BRWD3Q6RI45 1802 aa18.09■□□□□ 0.49
PRKDC-207ENST00000536483 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
PRKDC-207ENST00000536483 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
PRKDC-207ENST00000536483 ABCA3Q99758 1704 aa18.08■□□□□ 0.48
PRKDC-207ENST00000536483 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
PRKDC-207ENST00000536483 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
PRKDC-207ENST00000536483 SF3B2Q13435 895 aaKnown RBP18.07■□□□□ 0.48
PRKDC-207ENST00000536483 KRT27Q7Z3Y8 459 aa18.07■□□□□ 0.48
PRKDC-207ENST00000536483 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
PRKDC-207ENST00000536483 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
PRKDC-207ENST00000536483 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
PRKDC-207ENST00000536483 A0A0G2JS52 829 aa18.05■□□□□ 0.48
PRKDC-207ENST00000536483 MYT1Q01538 1121 aa18.05■□□□□ 0.48
PRKDC-207ENST00000536483 NGDNQ8NEJ9 315 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms