RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 RUNDC1Q96C34 613 aa24.17■■□□□ 1.46
CHPF-203ENST00000535926 NPATQ14207 1427 aa24.17■■□□□ 1.46
CHPF-203ENST00000535926 CLUAP1Q96AJ1 413 aa24.17■■□□□ 1.46
CHPF-203ENST00000535926 MTHFSP49914 203 aa24.15■■□□□ 1.46
CHPF-203ENST00000535926 FRAT1Q92837 279 aaPredicted RBP24.15■■□□□ 1.46
CHPF-203ENST00000535926 DAXXQ9UER7 740 aaPredicted RBP24.15■■□□□ 1.46
CHPF-203ENST00000535926 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
CHPF-203ENST00000535926 CANXP27824 592 aaKnown RBP24.15■■□□□ 1.46
CHPF-203ENST00000535926 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
CHPF-203ENST00000535926 RARSP54136 660 aaKnown RBP24.14■■□□□ 1.45
CHPF-203ENST00000535926 ZNF518AQ6AHZ1 1483 aa24.14■■□□□ 1.45
CHPF-203ENST00000535926 ADGRB1O14514 1584 aa24.13■■□□□ 1.45
CHPF-203ENST00000535926 NUTM2DQ5VT03 806 aaPredicted RBP24.13■■□□□ 1.45
CHPF-203ENST00000535926 TNNQ9UQP3 1299 aa24.13■■□□□ 1.45
CHPF-203ENST00000535926 SHPRHQ149N8 1683 aa24.12■■□□□ 1.45
CHPF-203ENST00000535926 USP19O94966 1318 aa24.11■■□□□ 1.45
CHPF-203ENST00000535926 RLBP1P12271 317 aa24.1■■□□□ 1.45
CHPF-203ENST00000535926 SEC24BO95487 1268 aa24.1■■□□□ 1.45
CHPF-203ENST00000535926 CFAP65Q6ZU64 1925 aaKnown RBP24.1■■□□□ 1.45
CHPF-203ENST00000535926 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
CHPF-203ENST00000535926 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
CHPF-203ENST00000535926 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
CHPF-203ENST00000535926 WDR63Q8IWG1 891 aa24.08■■□□□ 1.45
CHPF-203ENST00000535926 IL27Q8NEV9 243 aa24.08■■□□□ 1.44
CHPF-203ENST00000535926 PCDHB15Q9Y5E8 787 aa24.07■■□□□ 1.44
CHPF-203ENST00000535926 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
CHPF-203ENST00000535926 FRMPD1Q5SYB0 1578 aa24.07■■□□□ 1.44
CHPF-203ENST00000535926 QRICH2Q9H0J4 1663 aa24.07■■□□□ 1.44
CHPF-203ENST00000535926 PPLO60437 1756 aa24.06■■□□□ 1.44
CHPF-203ENST00000535926 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
CHPF-203ENST00000535926 GSE1Q14687 1217 aa24.04■■□□□ 1.44
CHPF-203ENST00000535926 CCDC27Q2M243 656 aa24.04■■□□□ 1.44
CHPF-203ENST00000535926 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CHPF-203ENST00000535926 CABP2Q9NPB3 220 aa24.03■■□□□ 1.44
CHPF-203ENST00000535926 POGZQ7Z3K3 1410 aa24.03■■□□□ 1.44
CHPF-203ENST00000535926 MAPK8IP3Q9UPT6 1336 aa24.03■■□□□ 1.44
CHPF-203ENST00000535926 EVC2Q86UK5 1308 aa24.02■■□□□ 1.44
CHPF-203ENST00000535926 CD109Q6YHK3 1445 aa24.02■■□□□ 1.43
CHPF-203ENST00000535926 MLH3Q9UHC1 1453 aa24.01■■□□□ 1.43
CHPF-203ENST00000535926 U2AF1L5P0DN76 240 aaPredicted RBP24.01■■□□□ 1.43
CHPF-203ENST00000535926 U2AF1Q01081 240 aaKnown RBP eCLIP24.01■■□□□ 1.43
CHPF-203ENST00000535926 SAFB2Q14151 953 aaKnown RBP eCLIP24.01■■□□□ 1.43
CHPF-203ENST00000535926 FRAT2O75474 233 aaPredicted RBP24■■□□□ 1.43
CHPF-203ENST00000535926 ANKRD36BQ8N2N9 1353 aa24■■□□□ 1.43
CHPF-203ENST00000535926 NPM1P06748 294 aaKnown RBP eCLIP23.99■■□□□ 1.43
CHPF-203ENST00000535926 PMFBP1Q8TBY8 1022 aa23.99■■□□□ 1.43
CHPF-203ENST00000535926 PUS7Q96PZ0 661 aaKnown RBP23.99■■□□□ 1.43
CHPF-203ENST00000535926 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
CHPF-203ENST00000535926 ABCC3O15438 1527 aa23.98■■□□□ 1.43
CHPF-203ENST00000535926 TULP4Q9NRJ4 1543 aa23.98■■□□□ 1.43
CHPF-203ENST00000535926 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
CHPF-203ENST00000535926 USP32Q8NFA0 1604 aa23.97■■□□□ 1.43
CHPF-203ENST00000535926 RAPGEF3O95398 923 aa23.97■■□□□ 1.43
CHPF-203ENST00000535926 GLI2P10070 1586 aa23.96■■□□□ 1.43
CHPF-203ENST00000535926 AAMPQ13685 434 aa23.96■■□□□ 1.43
CHPF-203ENST00000535926 MYH16Q9H6N6 1097 aa23.96■■□□□ 1.43
CHPF-203ENST00000535926 PDZRN3Q9UPQ7 1066 aa23.96■■□□□ 1.43
CHPF-203ENST00000535926 HECW2Q9P2P5 1572 aa23.95■■□□□ 1.42
CHPF-203ENST00000535926 IDI1Q13907 227 aa23.94■■□□□ 1.42
CHPF-203ENST00000535926 TSR2Q969E8 191 aaKnown RBP23.94■■□□□ 1.42
CHPF-203ENST00000535926 NCBP3Q53F19 620 aaKnown RBP23.93■■□□□ 1.42
CHPF-203ENST00000535926 STK26Q9P289 416 aa23.93■■□□□ 1.42
CHPF-203ENST00000535926 NSD2O96028 1365 aa23.93■■□□□ 1.42
CHPF-203ENST00000535926 RTN4Q9NQC3 1192 aaKnown RBP23.92■■□□□ 1.42
CHPF-203ENST00000535926 SIGLEC1Q9BZZ2 1709 aa23.92■■□□□ 1.42
CHPF-203ENST00000535926 NLRP1Q9C000 1473 aa23.92■■□□□ 1.42
CHPF-203ENST00000535926 GGNBP2Q9H3C7 697 aa23.92■■□□□ 1.42
CHPF-203ENST00000535926 PLEKHF1Q96S99 279 aa23.91■■□□□ 1.42
CHPF-203ENST00000535926 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
CHPF-203ENST00000535926 NEXMIFQ5QGS0 1516 aa23.91■■□□□ 1.42
CHPF-203ENST00000535926 A0A1W2PP64 1363 aa23.9■■□□□ 1.42
CHPF-203ENST00000535926 RWDD1Q9H446 243 aaPredicted RBP23.9■■□□□ 1.42
CHPF-203ENST00000535926 ARHGEF28Q8N1W1 1705 aaKnown RBP23.89■■□□□ 1.41
CHPF-203ENST00000535926 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.41
CHPF-203ENST00000535926 BRPF3Q9ULD4 1205 aa23.89■■□□□ 1.41
CHPF-203ENST00000535926 SRPK2P78362 688 aaKnown RBP23.88■■□□□ 1.41
CHPF-203ENST00000535926 ZKSCAN2Q63HK3 967 aa23.88■■□□□ 1.41
CHPF-203ENST00000535926 TRIM35Q9UPQ4 493 aa23.88■■□□□ 1.41
CHPF-203ENST00000535926 VIRMAQ69YN4 1812 aaKnown RBP23.88■■□□□ 1.41
CHPF-203ENST00000535926 EXOSC9Q06265 439 aaKnown RBP23.88■■□□□ 1.41
CHPF-203ENST00000535926 TMPOP42166 694 aaKnown RBP23.87■■□□□ 1.41
CHPF-203ENST00000535926 DZIP1LQ8IYY4 767 aaKnown RBP23.87■■□□□ 1.41
CHPF-203ENST00000535926 ABCC11Q96J66 1382 aa23.87■■□□□ 1.41
CHPF-203ENST00000535926 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
CHPF-203ENST00000535926 PIK3C2BO00750 1634 aa23.86■■□□□ 1.41
CHPF-203ENST00000535926 FYB1O15117 783 aa23.85■■□□□ 1.41
CHPF-203ENST00000535926 ADGRB2O60241 1585 aa23.85■■□□□ 1.41
CHPF-203ENST00000535926 FTSJ3Q8IY81 847 aaKnown RBP23.85■■□□□ 1.41
CHPF-203ENST00000535926 SSH1Q8WYL5 1049 aa23.84■■□□□ 1.41
CHPF-203ENST00000535926 TBC1D32Q96NH3 1257 aa23.84■■□□□ 1.41
CHPF-203ENST00000535926 TRIM27P14373 513 aa23.83■■□□□ 1.41
CHPF-203ENST00000535926 SMC4Q9NTJ3 1288 aa23.83■■□□□ 1.41
CHPF-203ENST00000535926 BECN1Q14457 450 aa23.83■■□□□ 1.41
CHPF-203ENST00000535926 SLKQ9H2G2 1235 aaPredicted RBP23.83■■□□□ 1.41
CHPF-203ENST00000535926 MINK1Q8N4C8 1332 aaPredicted RBP23.83■■□□□ 1.4
CHPF-203ENST00000535926 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
CHPF-203ENST00000535926 CT47B1P0C2W7 299 aaPredicted RBP23.82■■□□□ 1.4
CHPF-203ENST00000535926 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
CHPF-203ENST00000535926 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
CHPF-203ENST00000535926 COL3A1P02461 1466 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms