RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
CHFR-211ENST00000535897 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
CHFR-211ENST00000535897 EP400Q96L91 3159 aa12.12□□□□□ -0.47
CHFR-211ENST00000535897 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
CHFR-211ENST00000535897 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
CHFR-211ENST00000535897 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
CHFR-211ENST00000535897 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
CHFR-211ENST00000535897 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
CHFR-211ENST00000535897 ATRNO75882 1429 aa12.11□□□□□ -0.47
CHFR-211ENST00000535897 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
CHFR-211ENST00000535897 MARF1Q9Y4F3 1742 aaKnown RBP12.11□□□□□ -0.47
CHFR-211ENST00000535897 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
CHFR-211ENST00000535897 MYOM2P54296 1465 aa12.1□□□□□ -0.47
CHFR-211ENST00000535897 FOXO3O43524 673 aa12.1□□□□□ -0.47
CHFR-211ENST00000535897 STK26Q9P289 416 aa12.1□□□□□ -0.47
CHFR-211ENST00000535897 PXDNQ92626 1479 aa12.09□□□□□ -0.47
CHFR-211ENST00000535897 LRPPRCP42704 1394 aaKnown RBP12.09□□□□□ -0.47
CHFR-211ENST00000535897 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
CHFR-211ENST00000535897 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.48
CHFR-211ENST00000535897 WAPLQ7Z5K2 1190 aa12.07□□□□□ -0.48
CHFR-211ENST00000535897 GJD4Q96KN9 370 aaPredicted RBP12.07□□□□□ -0.48
CHFR-211ENST00000535897 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
CHFR-211ENST00000535897 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
CHFR-211ENST00000535897 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
CHFR-211ENST00000535897 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
CHFR-211ENST00000535897 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
CHFR-211ENST00000535897 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
CHFR-211ENST00000535897 ADGRF5Q8IZF2 1346 aa12.05□□□□□ -0.48
CHFR-211ENST00000535897 KIF1AQ12756 1690 aa12.04□□□□□ -0.48
CHFR-211ENST00000535897 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
CHFR-211ENST00000535897 TECPR2O15040 1411 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 RALGAPBQ86X10 1494 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 TMEM132EQ6IEE7 984 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 USP32Q8NFA0 1604 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 IFT172Q9UG01 1749 aa12.03□□□□□ -0.48
CHFR-211ENST00000535897 GLI3P10071 1580 aa12.02□□□□□ -0.49
CHFR-211ENST00000535897 SF3B2Q13435 895 aaKnown RBP12.02□□□□□ -0.49
CHFR-211ENST00000535897 CCDC9Q9Y3X0 531 aaKnown RBP12.02□□□□□ -0.49
CHFR-211ENST00000535897 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.49
CHFR-211ENST00000535897 ANKRD30BQ9BXX2 1392 aa12.02□□□□□ -0.49
CHFR-211ENST00000535897 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
CHFR-211ENST00000535897 LMOD2Q6P5Q4 547 aa12.01□□□□□ -0.49
CHFR-211ENST00000535897 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
CHFR-211ENST00000535897 ABCC11Q96J66 1382 aa12.01□□□□□ -0.49
CHFR-211ENST00000535897 SLIT2O94813 1529 aa12.01□□□□□ -0.49
CHFR-211ENST00000535897 BRWD3Q6RI45 1802 aa12□□□□□ -0.49
CHFR-211ENST00000535897 A0A0G2JS52 829 aa12□□□□□ -0.49
CHFR-211ENST00000535897 MYT1Q01538 1121 aa12□□□□□ -0.49
CHFR-211ENST00000535897 SPATA31E1Q6ZUB1 1445 aa12□□□□□ -0.49
CHFR-211ENST00000535897 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
CHFR-211ENST00000535897 PLCH1Q4KWH8 1693 aa12□□□□□ -0.49
CHFR-211ENST00000535897 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
CHFR-211ENST00000535897 PSME1Q06323 249 aa11.99□□□□□ -0.49
CHFR-211ENST00000535897 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
CHFR-211ENST00000535897 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
CHFR-211ENST00000535897 TNS3Q68CZ2 1445 aa11.99□□□□□ -0.49
CHFR-211ENST00000535897 DEFB132Q7Z7B7 95 aa11.98□□□□□ -0.49
CHFR-211ENST00000535897 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
CHFR-211ENST00000535897 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
CHFR-211ENST00000535897 SAFB2Q14151 953 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHFR-211ENST00000535897 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
CHFR-211ENST00000535897 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
CHFR-211ENST00000535897 VPS72Q15906 364 aa11.96□□□□□ -0.49
CHFR-211ENST00000535897 ABCA3Q99758 1704 aa11.96□□□□□ -0.49
CHFR-211ENST00000535897 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
CHFR-211ENST00000535897 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
CHFR-211ENST00000535897 KRT27Q7Z3Y8 459 aa11.95□□□□□ -0.5
CHFR-211ENST00000535897 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
CHFR-211ENST00000535897 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
CHFR-211ENST00000535897 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
CHFR-211ENST00000535897 POGKQ9P215 609 aa11.94□□□□□ -0.5
CHFR-211ENST00000535897 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
CHFR-211ENST00000535897 CFAP70Q5T0N1 1121 aa11.93□□□□□ -0.5
CHFR-211ENST00000535897 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
CHFR-211ENST00000535897 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
CHFR-211ENST00000535897 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
CHFR-211ENST00000535897 FAM83GA6ND36 823 aa11.91□□□□□ -0.5
CHFR-211ENST00000535897 BAG6P46379 1132 aa11.91□□□□□ -0.5
CHFR-211ENST00000535897 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
CHFR-211ENST00000535897 BTG4Q9NY30 223 aa11.91□□□□□ -0.5
CHFR-211ENST00000535897 LRP5O75197 1615 aa11.9□□□□□ -0.5
CHFR-211ENST00000535897 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
CHFR-211ENST00000535897 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
CHFR-211ENST00000535897 NRAPQ86VF7 1730 aa11.9□□□□□ -0.5
CHFR-211ENST00000535897 HIRIP3Q9BW71 556 aaPredicted RBP11.9□□□□□ -0.5
CHFR-211ENST00000535897 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
CHFR-211ENST00000535897 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
CHFR-211ENST00000535897 DLC1Q96QB1 1528 aa11.88□□□□□ -0.51
CHFR-211ENST00000535897 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
CHFR-211ENST00000535897 EIF3AQ14152 1382 aaKnown RBP11.88□□□□□ -0.51
CHFR-211ENST00000535897 RGPD1P0DJD0 1748 aa11.88□□□□□ -0.51
CHFR-211ENST00000535897 TRPM3Q9HCF6 1732 aaPredicted RBP11.88□□□□□ -0.51
CHFR-211ENST00000535897 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
CHFR-211ENST00000535897 MINK1Q8N4C8 1332 aaPredicted RBP11.87□□□□□ -0.51
CHFR-211ENST00000535897 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
CHFR-211ENST00000535897 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
CHFR-211ENST00000535897 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms