RNA–Protein interactions for RNA: ENST00000535887.1

C12orf4-204, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-204ENST00000535887 SPSB2Q99619 263 aa12.58□□□□□ -0.4
C12orf4-204ENST00000535887 PDE4DQ08499 809 aa12.57□□□□□ -0.4
C12orf4-204ENST00000535887 TTLL12Q14166 644 aaPredicted RBP12.57□□□□□ -0.4
C12orf4-204ENST00000535887 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
C12orf4-204ENST00000535887 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
C12orf4-204ENST00000535887 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
C12orf4-204ENST00000535887 GIGYF2Q6Y7W6 1299 aaKnown RBP12.54□□□□□ -0.4
C12orf4-204ENST00000535887 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
C12orf4-204ENST00000535887 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
C12orf4-204ENST00000535887 TOR4AQ9NXH8 423 aa12.53□□□□□ -0.4
C12orf4-204ENST00000535887 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
C12orf4-204ENST00000535887 USP46P62068 366 aa12.51□□□□□ -0.41
C12orf4-204ENST00000535887 FCF1Q9Y324 198 aaKnown RBP12.51□□□□□ -0.41
C12orf4-204ENST00000535887 KDM4AO75164 1064 aa12.5□□□□□ -0.41
C12orf4-204ENST00000535887 RPIAP49247 311 aa12.5□□□□□ -0.41
C12orf4-204ENST00000535887 GRIPAP1Q4V328 841 aa12.5□□□□□ -0.41
C12orf4-204ENST00000535887 MORN1Q5T089 497 aa12.5□□□□□ -0.41
C12orf4-204ENST00000535887 CRIPAKQ8N1N5 446 aa12.5□□□□□ -0.41
C12orf4-204ENST00000535887 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
C12orf4-204ENST00000535887 AVPP01185 164 aa12.49□□□□□ -0.41
C12orf4-204ENST00000535887 FUT2Q10981 343 aa12.48□□□□□ -0.41
C12orf4-204ENST00000535887 GMPR2Q9P2T1 348 aaKnown RBP12.48□□□□□ -0.41
C12orf4-204ENST00000535887 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
C12orf4-204ENST00000535887 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
C12orf4-204ENST00000535887 MS4A1P11836 297 aa12.45□□□□□ -0.42
C12orf4-204ENST00000535887 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
C12orf4-204ENST00000535887 SLC27A5Q9Y2P5 690 aa12.45□□□□□ -0.42
C12orf4-204ENST00000535887 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
C12orf4-204ENST00000535887 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
C12orf4-204ENST00000535887 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
C12orf4-204ENST00000535887 CYP4X1Q8N118 509 aa12.43□□□□□ -0.42
C12orf4-204ENST00000535887 AXIN1O15169 862 aa12.42□□□□□ -0.42
C12orf4-204ENST00000535887 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
C12orf4-204ENST00000535887 HOXA2O43364 376 aa12.4□□□□□ -0.42
C12orf4-204ENST00000535887 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
C12orf4-204ENST00000535887 GJA5P36382 358 aa12.4□□□□□ -0.42
C12orf4-204ENST00000535887 BRICD5Q6PL45 260 aa12.4□□□□□ -0.42
C12orf4-204ENST00000535887 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
C12orf4-204ENST00000535887 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
C12orf4-204ENST00000535887 WFS1O76024 890 aa12.38□□□□□ -0.43
C12orf4-204ENST00000535887 SMCPP49901 116 aaPredicted RBP12.38□□□□□ -0.43
C12orf4-204ENST00000535887 NFX1Q12986 1120 aaKnown RBP12.38□□□□□ -0.43
C12orf4-204ENST00000535887 Q3C1V9 767 aa12.38□□□□□ -0.43
C12orf4-204ENST00000535887 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
C12orf4-204ENST00000535887 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
C12orf4-204ENST00000535887 LCE2CQ5TA81 110 aa12.36□□□□□ -0.43
C12orf4-204ENST00000535887 SMPD1P17405 629 aa12.35□□□□□ -0.43
C12orf4-204ENST00000535887 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
C12orf4-204ENST00000535887 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
C12orf4-204ENST00000535887 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
C12orf4-204ENST00000535887 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
C12orf4-204ENST00000535887 GPBP1L1Q9HC44 474 aaPredicted RBP12.33□□□□□ -0.44
C12orf4-204ENST00000535887 MSS51Q4VC12 460 aa12.32□□□□□ -0.44
C12orf4-204ENST00000535887 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
C12orf4-204ENST00000535887 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
C12orf4-204ENST00000535887 WNT7AO00755 349 aa12.3□□□□□ -0.44
C12orf4-204ENST00000535887 SPTLC1O15269 473 aa12.3□□□□□ -0.44
C12orf4-204ENST00000535887 ZBTB24O43167 697 aaPredicted RBP12.3□□□□□ -0.44
C12orf4-204ENST00000535887 FDX1P10109 184 aa12.3□□□□□ -0.44
C12orf4-204ENST00000535887 SNRPBP14678 240 aaKnown RBP12.3□□□□□ -0.44
C12orf4-204ENST00000535887 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
C12orf4-204ENST00000535887 TUSC1Q2TAM9 212 aa12.3□□□□□ -0.44
C12orf4-204ENST00000535887 J3QL48 77 aa12.29□□□□□ -0.44
C12orf4-204ENST00000535887 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
C12orf4-204ENST00000535887 TRIM32Q13049 653 aa12.28□□□□□ -0.44
C12orf4-204ENST00000535887 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
C12orf4-204ENST00000535887 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
C12orf4-204ENST00000535887 SNIP1Q8TAD8 396 aaKnown RBP12.28□□□□□ -0.44
C12orf4-204ENST00000535887 HLA-CQ95604 372 aa12.28□□□□□ -0.44
C12orf4-204ENST00000535887 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
C12orf4-204ENST00000535887 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
C12orf4-204ENST00000535887 WIPF1O43516 503 aa12.27□□□□□ -0.45
C12orf4-204ENST00000535887 MYSM1Q5VVJ2 828 aa12.27□□□□□ -0.45
C12orf4-204ENST00000535887 USB1Q9BQ65 265 aaKnown RBP12.27□□□□□ -0.45
C12orf4-204ENST00000535887 PCDHGC3Q9UN70 934 aa12.27□□□□□ -0.45
C12orf4-204ENST00000535887 NDUFV2P19404 249 aa12.26□□□□□ -0.45
C12orf4-204ENST00000535887 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
C12orf4-204ENST00000535887 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
C12orf4-204ENST00000535887 MMP16P51512 607 aa12.25□□□□□ -0.45
C12orf4-204ENST00000535887 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
C12orf4-204ENST00000535887 GUCA2AQ02747 115 aa12.24□□□□□ -0.45
C12orf4-204ENST00000535887 PRPF38BQ5VTL8 546 aaKnown RBP12.24□□□□□ -0.45
C12orf4-204ENST00000535887 HPS1Q92902 700 aa12.24□□□□□ -0.45
C12orf4-204ENST00000535887 RETREG3Q86VR2 466 aa12.23□□□□□ -0.45
C12orf4-204ENST00000535887 GOPCQ9HD26 462 aa12.23□□□□□ -0.45
C12orf4-204ENST00000535887 STK17AQ9UEE5 414 aa12.23□□□□□ -0.45
C12orf4-204ENST00000535887 SKIV2LQ15477 1246 aaKnown RBP12.22□□□□□ -0.45
C12orf4-204ENST00000535887 SH3D19Q5HYK7 790 aa12.22□□□□□ -0.45
C12orf4-204ENST00000535887 TERTO14746 1132 aaKnown RBP12.21□□□□□ -0.45
C12orf4-204ENST00000535887 TRIM47Q96LD4 638 aa12.21□□□□□ -0.45
C12orf4-204ENST00000535887 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
C12orf4-204ENST00000535887 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
C12orf4-204ENST00000535887 SKOR1P84550 965 aa12.19□□□□□ -0.46
C12orf4-204ENST00000535887 MTMR2Q13614 643 aa12.19□□□□□ -0.46
C12orf4-204ENST00000535887 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
C12orf4-204ENST00000535887 DESI1Q6ICB0 168 aa12.18□□□□□ -0.46
C12orf4-204ENST00000535887 LIMD1Q9UGP4 676 aa12.18□□□□□ -0.46
C12orf4-204ENST00000535887 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
C12orf4-204ENST00000535887 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
C12orf4-204ENST00000535887 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms