RNA–Protein interactions for RNA: ENST00000535589.3

ACTR3-208, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2 BASIC

Gene ACTR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-208ENST00000535589 NPHP4O75161 1426 aaPredicted RBP22.66■■□□□ 1.22
ACTR3-208ENST00000535589 CCER2I3L3R5 266 aa22.66■■□□□ 1.22
ACTR3-208ENST00000535589 PRKRIP1Q9H875 184 aaPredicted RBP22.66■■□□□ 1.22
ACTR3-208ENST00000535589 XRN1Q8IZH2 1706 aaKnown RBP22.65■■□□□ 1.22
ACTR3-208ENST00000535589 ROBO2Q9HCK4 1378 aa22.65■■□□□ 1.22
ACTR3-208ENST00000535589 PER1O15534 1290 aaPredicted RBP22.65■■□□□ 1.22
ACTR3-208ENST00000535589 AMOTL2Q9Y2J4 779 aa22.65■■□□□ 1.22
ACTR3-208ENST00000535589 PTCH1Q13635 1447 aa22.63■■□□□ 1.21
ACTR3-208ENST00000535589 CHD2O14647 1828 aaKnown RBP22.62■■□□□ 1.21
ACTR3-208ENST00000535589 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
ACTR3-208ENST00000535589 CABP2Q9NPB3 220 aa22.61■■□□□ 1.21
ACTR3-208ENST00000535589 NCKAP5LQ9HCH0 1330 aa22.61■■□□□ 1.21
ACTR3-208ENST00000535589 ATAD2Q6PL18 1390 aa22.6■■□□□ 1.21
ACTR3-208ENST00000535589 CDK19Q9BWU1 502 aa22.6■■□□□ 1.21
ACTR3-208ENST00000535589 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
ACTR3-208ENST00000535589 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.59■■□□□ 1.21
ACTR3-208ENST00000535589 KTN1Q86UP2 1357 aaKnown RBP22.58■■□□□ 1.21
ACTR3-208ENST00000535589 NINLQ9Y2I6 1382 aa22.58■■□□□ 1.21
ACTR3-208ENST00000535589 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
ACTR3-208ENST00000535589 KNSTRNQ9Y448 316 aa22.57■■□□□ 1.2
ACTR3-208ENST00000535589 LMTK3Q96Q04 1460 aa22.56■■□□□ 1.2
ACTR3-208ENST00000535589 WASLO00401 505 aaPredicted RBP22.56■■□□□ 1.2
ACTR3-208ENST00000535589 SLC12A5Q9H2X9 1139 aa22.56■■□□□ 1.2
ACTR3-208ENST00000535589 RALBP1Q15311 655 aa22.54■■□□□ 1.2
ACTR3-208ENST00000535589 KCNA6P17658 529 aa22.53■■□□□ 1.2
ACTR3-208ENST00000535589 CNGB1Q14028 1251 aaPredicted RBP22.52■■□□□ 1.2
ACTR3-208ENST00000535589 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
ACTR3-208ENST00000535589 HSPA2P54652 639 aa22.51■■□□□ 1.19
ACTR3-208ENST00000535589 PARD3Q8TEW0 1356 aa22.51■■□□□ 1.19
ACTR3-208ENST00000535589 NPC1L1Q9UHC9 1359 aa22.51■■□□□ 1.19
ACTR3-208ENST00000535589 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
ACTR3-208ENST00000535589 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
ACTR3-208ENST00000535589 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
ACTR3-208ENST00000535589 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
ACTR3-208ENST00000535589 USP32Q8NFA0 1604 aa22.48■■□□□ 1.19
ACTR3-208ENST00000535589 NSD3Q9BZ95 1437 aa22.47■■□□□ 1.19
ACTR3-208ENST00000535589 MYBBP1AQ9BQG0 1328 aaKnown RBP22.47■■□□□ 1.19
ACTR3-208ENST00000535589 TERF2IPQ9NYB0 399 aa22.46■■□□□ 1.19
ACTR3-208ENST00000535589 ATP7BP35670 1465 aa22.45■■□□□ 1.19
ACTR3-208ENST00000535589 CD163L1Q9NR16 1453 aa22.45■■□□□ 1.19
ACTR3-208ENST00000535589 A0A1W2PP64 1363 aa22.45■■□□□ 1.18
ACTR3-208ENST00000535589 STRCQ7RTU9 1775 aa22.45■■□□□ 1.18
ACTR3-208ENST00000535589 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
ACTR3-208ENST00000535589 CABP1Q9NZU7 370 aa22.44■■□□□ 1.18
ACTR3-208ENST00000535589 PPIP5K1Q6PFW1 1433 aa22.43■■□□□ 1.18
ACTR3-208ENST00000535589 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
ACTR3-208ENST00000535589 TOPAZ1Q8N9V7 1692 aa22.43■■□□□ 1.18
ACTR3-208ENST00000535589 CCDC184Q52MB2 194 aa22.42■■□□□ 1.18
ACTR3-208ENST00000535589 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
ACTR3-208ENST00000535589 MRS2Q9HD23 443 aa22.42■■□□□ 1.18
ACTR3-208ENST00000535589 CCDC61Q9Y6R9 512 aa22.42■■□□□ 1.18
ACTR3-208ENST00000535589 NALCNQ8IZF0 1738 aa22.42■■□□□ 1.18
ACTR3-208ENST00000535589 PRR36Q9H6K5 1346 aa22.41■■□□□ 1.18
ACTR3-208ENST00000535589 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
ACTR3-208ENST00000535589 CDC42BPGQ6DT37 1551 aa22.4■■□□□ 1.18
ACTR3-208ENST00000535589 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
ACTR3-208ENST00000535589 FMN2Q9NZ56 1722 aa22.39■■□□□ 1.18
ACTR3-208ENST00000535589 CGNL1Q0VF96 1302 aa22.39■■□□□ 1.17
ACTR3-208ENST00000535589 ITSN1Q15811 1721 aa22.39■■□□□ 1.17
ACTR3-208ENST00000535589 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
ACTR3-208ENST00000535589 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
ACTR3-208ENST00000535589 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
ACTR3-208ENST00000535589 NSD2O96028 1365 aa22.37■■□□□ 1.17
ACTR3-208ENST00000535589 AKAP12Q02952 1782 aa22.37■■□□□ 1.17
ACTR3-208ENST00000535589 ANKARQ7Z5J8 1434 aa22.36■■□□□ 1.17
ACTR3-208ENST00000535589 STRCP1A6NGW2 1772 aa22.35■■□□□ 1.17
ACTR3-208ENST00000535589 MON2Q7Z3U7 1717 aa22.35■■□□□ 1.17
ACTR3-208ENST00000535589 RGPD8O14715 1765 aaPredicted RBP22.33■■□□□ 1.17
ACTR3-208ENST00000535589 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.17
ACTR3-208ENST00000535589 NUTM2FA1L443 756 aa22.33■■□□□ 1.17
ACTR3-208ENST00000535589 PROSER2Q86WR7 435 aaPredicted RBP22.33■■□□□ 1.17
ACTR3-208ENST00000535589 ANKRD26Q9UPS8 1709 aa22.33■■□□□ 1.16
ACTR3-208ENST00000535589 KIF20BQ96Q89 1820 aa22.32■■□□□ 1.16
ACTR3-208ENST00000535589 PPP2R1AP30153 589 aa22.32■■□□□ 1.16
ACTR3-208ENST00000535589 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
ACTR3-208ENST00000535589 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
ACTR3-208ENST00000535589 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
ACTR3-208ENST00000535589 MORC1Q86VD1 984 aa22.3■■□□□ 1.16
ACTR3-208ENST00000535589 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
ACTR3-208ENST00000535589 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
ACTR3-208ENST00000535589 ACEP12821 1306 aa22.28■■□□□ 1.16
ACTR3-208ENST00000535589 FYB1O15117 783 aa22.27■■□□□ 1.16
ACTR3-208ENST00000535589 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.16
ACTR3-208ENST00000535589 NRKQ7Z2Y5 1582 aa22.27■■□□□ 1.16
ACTR3-208ENST00000535589 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
ACTR3-208ENST00000535589 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
ACTR3-208ENST00000535589 POLR3AO14802 1390 aaPredicted RBP22.25■■□□□ 1.15
ACTR3-208ENST00000535589 TMEM94Q12767 1356 aa22.24■■□□□ 1.15
ACTR3-208ENST00000535589 USP6P35125 1406 aa22.24■■□□□ 1.15
ACTR3-208ENST00000535589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.152e-8■■□□□ 11.5
ACTR3-208ENST00000535589 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
ACTR3-208ENST00000535589 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
ACTR3-208ENST00000535589 PMFBP1Q8TBY8 1022 aa22.23■■□□□ 1.15
ACTR3-208ENST00000535589 C19orf44Q9H6X5 657 aa22.23■■□□□ 1.15
ACTR3-208ENST00000535589 NGDNQ8NEJ9 315 aaKnown RBP22.21■■□□□ 1.15
ACTR3-208ENST00000535589 DCCP43146 1447 aa22.21■■□□□ 1.15
ACTR3-208ENST00000535589 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
ACTR3-208ENST00000535589 SSH2Q76I76 1423 aa22.19■■□□□ 1.14
ACTR3-208ENST00000535589 XIRP1Q702N8 1843 aaKnown RBP22.19■■□□□ 1.14
ACTR3-208ENST00000535589 TNNT2P45379 298 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms