RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 FAM135BQ49AJ0 1406 aa27.88■■■□□ 2.05
TNFRSF1A-205ENST00000534885 ROBO2Q9HCK4 1378 aa27.87■■■□□ 2.05
TNFRSF1A-205ENST00000534885 CABP2Q9NPB3 220 aa27.87■■■□□ 2.05
TNFRSF1A-205ENST00000534885 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
TNFRSF1A-205ENST00000534885 YTHDC1Q96MU7 727 aaKnown RBP27.85■■■□□ 2.05
TNFRSF1A-205ENST00000534885 PUS7Q96PZ0 661 aaKnown RBP27.84■■■□□ 2.05
TNFRSF1A-205ENST00000534885 SRPK2P78362 688 aaKnown RBP27.83■■■□□ 2.05
TNFRSF1A-205ENST00000534885 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
TNFRSF1A-205ENST00000534885 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
TNFRSF1A-205ENST00000534885 SLC12A5Q9H2X9 1139 aa27.82■■■□□ 2.04
TNFRSF1A-205ENST00000534885 XRN1Q8IZH2 1706 aaKnown RBP27.8■■■□□ 2.04
TNFRSF1A-205ENST00000534885 CDK19Q9BWU1 502 aa27.8■■■□□ 2.04
TNFRSF1A-205ENST00000534885 NPHP4O75161 1426 aaPredicted RBP27.79■■■□□ 2.04
TNFRSF1A-205ENST00000534885 NCKAP5LQ9HCH0 1330 aa27.78■■■□□ 2.04
TNFRSF1A-205ENST00000534885 CCDC184Q52MB2 194 aa27.78■■■□□ 2.04
TNFRSF1A-205ENST00000534885 KNSTRNQ9Y448 316 aa27.78■■■□□ 2.04
TNFRSF1A-205ENST00000534885 KTN1Q86UP2 1357 aaKnown RBP27.77■■■□□ 2.04
TNFRSF1A-205ENST00000534885 PIK3R4Q99570 1358 aa27.77■■■□□ 2.04
TNFRSF1A-205ENST00000534885 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.77■■■□□ 2.04
TNFRSF1A-205ENST00000534885 PTCH1Q13635 1447 aa27.76■■■□□ 2.04
TNFRSF1A-205ENST00000534885 CC2D1BQ5T0F9 858 aaKnown RBP27.76■■■□□ 2.03
TNFRSF1A-205ENST00000534885 CARD14Q9BXL6 1004 aa27.76■■■□□ 2.03
TNFRSF1A-205ENST00000534885 ATAD2Q6PL18 1390 aa27.75■■■□□ 2.03
TNFRSF1A-205ENST00000534885 PARD3Q8TEW0 1356 aa27.74■■■□□ 2.03
TNFRSF1A-205ENST00000534885 CHD2O14647 1828 aaKnown RBP27.74■■■□□ 2.03
TNFRSF1A-205ENST00000534885 AMER1Q5JTC6 1135 aaPredicted RBP27.73■■■□□ 2.03
TNFRSF1A-205ENST00000534885 WASLO00401 505 aaPredicted RBP27.72■■■□□ 2.03
TNFRSF1A-205ENST00000534885 KCNA6P17658 529 aa27.72■■■□□ 2.03
TNFRSF1A-205ENST00000534885 RALBP1Q15311 655 aa27.72■■■□□ 2.03
TNFRSF1A-205ENST00000534885 ADGRB2O60241 1585 aa27.71■■■□□ 2.03
TNFRSF1A-205ENST00000534885 NINLQ9Y2I6 1382 aa27.7■■■□□ 2.03
TNFRSF1A-205ENST00000534885 HSPA2P54652 639 aa27.7■■■□□ 2.02
TNFRSF1A-205ENST00000534885 ANKRD36BQ8N2N9 1353 aa27.69■■■□□ 2.02
TNFRSF1A-205ENST00000534885 NSD3Q9BZ95 1437 aa27.68■■■□□ 2.02
TNFRSF1A-205ENST00000534885 MRS2Q9HD23 443 aa27.68■■■□□ 2.02
TNFRSF1A-205ENST00000534885 LMTK3Q96Q04 1460 aa27.68■■■□□ 2.02
TNFRSF1A-205ENST00000534885 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
TNFRSF1A-205ENST00000534885 NPC1L1Q9UHC9 1359 aa27.66■■■□□ 2.02
TNFRSF1A-205ENST00000534885 CD163L1Q9NR16 1453 aa27.65■■■□□ 2.02
TNFRSF1A-205ENST00000534885 A0A1W2PP64 1363 aa27.65■■■□□ 2.02
TNFRSF1A-205ENST00000534885 CABP1Q9NZU7 370 aa27.64■■■□□ 2.02
TNFRSF1A-205ENST00000534885 ATP7BP35670 1465 aa27.61■■■□□ 2.01
TNFRSF1A-205ENST00000534885 NUDT16Q96DE0 195 aaKnown RBP27.61■■■□□ 2.01
TNFRSF1A-205ENST00000534885 USP32Q8NFA0 1604 aa27.61■■■□□ 2.01
TNFRSF1A-205ENST00000534885 PRR36Q9H6K5 1346 aa27.6■■■□□ 2.01
TNFRSF1A-205ENST00000534885 TERF2IPQ9NYB0 399 aa27.6■■■□□ 2.01
TNFRSF1A-205ENST00000534885 PPIP5K1Q6PFW1 1433 aa27.59■■■□□ 2.01
TNFRSF1A-205ENST00000534885 BRD4O60885 1362 aaPredicted RBP27.57■■■□□ 2
TNFRSF1A-205ENST00000534885 NLRP13Q86W25 1043 aa27.57■■■□□ 2
TNFRSF1A-205ENST00000534885 NWD1Q149M9 1564 aa27.57■■■□□ 2
TNFRSF1A-205ENST00000534885 NUTM2FA1L443 756 aa27.56■■■□□ 2
TNFRSF1A-205ENST00000534885 CCDC61Q9Y6R9 512 aa27.56■■■□□ 2
TNFRSF1A-205ENST00000534885 NALCNQ8IZF0 1738 aa27.55■■■□□ 2
TNFRSF1A-205ENST00000534885 RBM33Q96EV2 1170 aaKnown RBP27.55■■■□□ 2
TNFRSF1A-205ENST00000534885 CGNL1Q0VF96 1302 aa27.55■■■□□ 2
TNFRSF1A-205ENST00000534885 HDGFL2Q7Z4V5 671 aaPredicted RBP27.55■■■□□ 2
TNFRSF1A-205ENST00000534885 FAM9BQ8IZU0 186 aa27.54■■■□□ 2
TNFRSF1A-205ENST00000534885 TOPAZ1Q8N9V7 1692 aa27.54■■■□□ 2
TNFRSF1A-205ENST00000534885 STRCQ7RTU9 1775 aa27.53■■■□□ 2
TNFRSF1A-205ENST00000534885 CDC42BPGQ6DT37 1551 aa27.52■■■□□ 2
TNFRSF1A-205ENST00000534885 CPSF1Q10570 1443 aaKnown RBP27.51■■□□□ 1.99
TNFRSF1A-205ENST00000534885 PPP2R1AP30153 589 aa27.51■■□□□ 1.99
TNFRSF1A-205ENST00000534885 CENPBP07199 599 aaPredicted RBP27.5■■□□□ 1.99
TNFRSF1A-205ENST00000534885 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF1A-205ENST00000534885 ITSN1Q15811 1721 aa27.48■■□□□ 1.99
TNFRSF1A-205ENST00000534885 FMN2Q9NZ56 1722 aa27.48■■□□□ 1.99
TNFRSF1A-205ENST00000534885 PNISRQ8TF01 805 aaKnown RBP27.47■■□□□ 1.99
TNFRSF1A-205ENST00000534885 AKAP12Q02952 1782 aa27.47■■□□□ 1.99
TNFRSF1A-205ENST00000534885 STRCP1A6NGW2 1772 aa27.47■■□□□ 1.99
TNFRSF1A-205ENST00000534885 NKTRP30414 1462 aaKnown RBP27.47■■□□□ 1.99
TNFRSF1A-205ENST00000534885 NSD2O96028 1365 aa27.46■■□□□ 1.99
TNFRSF1A-205ENST00000534885 MON2Q7Z3U7 1717 aa27.46■■□□□ 1.99
TNFRSF1A-205ENST00000534885 ADGRL3Q9HAR2 1447 aa27.46■■□□□ 1.99
TNFRSF1A-205ENST00000534885 MORC1Q86VD1 984 aa27.45■■□□□ 1.99
TNFRSF1A-205ENST00000534885 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
TNFRSF1A-205ENST00000534885 FYB1O15117 783 aa27.43■■□□□ 1.98
TNFRSF1A-205ENST00000534885 GGNBP2Q9H3C7 697 aa27.43■■□□□ 1.98
TNFRSF1A-205ENST00000534885 EDC4Q6P2E9 1401 aaKnown RBP27.42■■□□□ 1.98
TNFRSF1A-205ENST00000534885 ANKRD26Q9UPS8 1709 aa27.42■■□□□ 1.98
TNFRSF1A-205ENST00000534885 ANKARQ7Z5J8 1434 aa27.42■■□□□ 1.98
TNFRSF1A-205ENST00000534885 PLEKHG3A1L390 1219 aa27.42■■□□□ 1.98
TNFRSF1A-205ENST00000534885 TNNT2P45379 298 aaPredicted RBP27.42■■□□□ 1.98
TNFRSF1A-205ENST00000534885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.42■■□□□ 1.98
TNFRSF1A-205ENST00000534885 PROSER2Q86WR7 435 aaPredicted RBP27.41■■□□□ 1.98
TNFRSF1A-205ENST00000534885 ACEP12821 1306 aa27.41■■□□□ 1.98
TNFRSF1A-205ENST00000534885 C14orf37Q86TY3 774 aa27.39■■□□□ 1.98
TNFRSF1A-205ENST00000534885 HNRNPUQ00839 825 aaKnown RBP eCLIP27.39■■□□□ 1.97
TNFRSF1A-205ENST00000534885 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
TNFRSF1A-205ENST00000534885 PMFBP1Q8TBY8 1022 aa27.38■■□□□ 1.97
TNFRSF1A-205ENST00000534885 ZNF692Q9BU19 519 aaPredicted RBP27.38■■□□□ 1.97
TNFRSF1A-205ENST00000534885 NRKQ7Z2Y5 1582 aa27.36■■□□□ 1.97
TNFRSF1A-205ENST00000534885 USP6P35125 1406 aa27.34■■□□□ 1.97
TNFRSF1A-205ENST00000534885 POLR3AO14802 1390 aaPredicted RBP27.33■■□□□ 1.97
TNFRSF1A-205ENST00000534885 TMEM94Q12767 1356 aa27.33■■□□□ 1.97
TNFRSF1A-205ENST00000534885 NME9Q86XW9 330 aa27.32■■□□□ 1.96
TNFRSF1A-205ENST00000534885 NGDNQ8NEJ9 315 aaKnown RBP27.31■■□□□ 1.96
TNFRSF1A-205ENST00000534885 ZRANB1Q9UGI0 708 aa27.29■■□□□ 1.96
TNFRSF1A-205ENST00000534885 TTC21BQ7Z4L5 1316 aa27.29■■□□□ 1.96
TNFRSF1A-205ENST00000534885 MTHFSP49914 203 aa27.28■■□□□ 1.96
TNFRSF1A-205ENST00000534885 C19orf44Q9H6X5 657 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms