RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 MS4A3Q96HJ5 214 aa16.62■□□□□ 0.25
TNC-209ENST00000534839 PNPLA6Q8IY17 1366 aa16.62■□□□□ 0.25
TNC-209ENST00000534839 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
TNC-209ENST00000534839 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
TNC-209ENST00000534839 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
TNC-209ENST00000534839 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.61■□□□□ 0.25
TNC-209ENST00000534839 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
TNC-209ENST00000534839 PIK3C2BO00750 1634 aa16.6■□□□□ 0.25
TNC-209ENST00000534839 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
TNC-209ENST00000534839 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
TNC-209ENST00000534839 ATF3P18847 181 aa16.59■□□□□ 0.25
TNC-209ENST00000534839 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
TNC-209ENST00000534839 RNF25Q96BH1 459 aaPredicted RBP16.58■□□□□ 0.24
TNC-209ENST00000534839 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
TNC-209ENST00000534839 SF3B2Q13435 895 aaKnown RBP16.57■□□□□ 0.24
TNC-209ENST00000534839 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
TNC-209ENST00000534839 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
TNC-209ENST00000534839 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
TNC-209ENST00000534839 PCDHB8Q9UN66 801 aa16.57■□□□□ 0.24
TNC-209ENST00000534839 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
TNC-209ENST00000534839 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
TNC-209ENST00000534839 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
TNC-209ENST00000534839 RGL2O15211 777 aa16.55■□□□□ 0.24
TNC-209ENST00000534839 BCANQ96GW7 911 aa16.55■□□□□ 0.24
TNC-209ENST00000534839 TRPC6Q9Y210 931 aa16.55■□□□□ 0.24
TNC-209ENST00000534839 EFCAB6Q5THR3 1501 aa16.54■□□□□ 0.24
TNC-209ENST00000534839 C1QTNF8P60827 252 aa16.53■□□□□ 0.24
TNC-209ENST00000534839 DDX17Q92841 729 aaKnown RBP16.53■□□□□ 0.24
TNC-209ENST00000534839 CEP152O94986 1710 aa16.53■□□□□ 0.24
TNC-209ENST00000534839 ZNF784Q8NCA9 323 aaPredicted RBP16.52■□□□□ 0.24
TNC-209ENST00000534839 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
TNC-209ENST00000534839 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.23
TNC-209ENST00000534839 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
TNC-209ENST00000534839 CLCN6P51797 869 aa16.5■□□□□ 0.23
TNC-209ENST00000534839 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
TNC-209ENST00000534839 UNC13BO14795 1591 aa16.48■□□□□ 0.23
TNC-209ENST00000534839 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
TNC-209ENST00000534839 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
TNC-209ENST00000534839 IDI1Q13907 227 aa16.46■□□□□ 0.23
TNC-209ENST00000534839 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
TNC-209ENST00000534839 BAG6P46379 1132 aa16.44■□□□□ 0.22
TNC-209ENST00000534839 MST1RQ04912 1400 aa16.44■□□□□ 0.22
TNC-209ENST00000534839 EEA1Q15075 1411 aa16.44■□□□□ 0.22
TNC-209ENST00000534839 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
TNC-209ENST00000534839 RIOK3O14730 519 aaKnown RBP16.43■□□□□ 0.22
TNC-209ENST00000534839 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
TNC-209ENST00000534839 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
TNC-209ENST00000534839 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
TNC-209ENST00000534839 GLI3P10071 1580 aa16.41■□□□□ 0.22
TNC-209ENST00000534839 SPHKAPQ2M3C7 1700 aa16.41■□□□□ 0.22
TNC-209ENST00000534839 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
TNC-209ENST00000534839 DCCP43146 1447 aa16.39■□□□□ 0.21
TNC-209ENST00000534839 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
TNC-209ENST00000534839 POTEIP0CG38 1075 aa16.39■□□□□ 0.21
TNC-209ENST00000534839 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
TNC-209ENST00000534839 RALGAPBQ86X10 1494 aa16.39■□□□□ 0.21
TNC-209ENST00000534839 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
TNC-209ENST00000534839 ADGRB3O60242 1522 aa16.37■□□□□ 0.21
TNC-209ENST00000534839 RSPH4AQ5TD94 716 aa16.37■□□□□ 0.21
TNC-209ENST00000534839 BMP2KQ9NSY1 1161 aaPredicted RBP16.36■□□□□ 0.21
TNC-209ENST00000534839 CAMTA1Q9Y6Y1 1673 aa16.36■□□□□ 0.21
TNC-209ENST00000534839 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
TNC-209ENST00000534839 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
TNC-209ENST00000534839 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
TNC-209ENST00000534839 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
TNC-209ENST00000534839 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
TNC-209ENST00000534839 PSEN1P49768 467 aa16.34■□□□□ 0.21
TNC-209ENST00000534839 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
TNC-209ENST00000534839 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
TNC-209ENST00000534839 PDAP1Q13442 181 aaKnown RBP16.32■□□□□ 0.2
TNC-209ENST00000534839 ADAMTS13Q76LX8 1427 aa16.32■□□□□ 0.2
TNC-209ENST00000534839 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
TNC-209ENST00000534839 COL22A1Q8NFW1 1626 aaPredicted RBP16.31■□□□□ 0.2
TNC-209ENST00000534839 SOS2Q07890 1332 aaPredicted RBP16.31■□□□□ 0.2
TNC-209ENST00000534839 TTLL13PA6NNM8 815 aa16.31■□□□□ 0.2
TNC-209ENST00000534839 TIE1P35590 1138 aa16.31■□□□□ 0.2
TNC-209ENST00000534839 AMOTL2Q9Y2J4 779 aa16.31■□□□□ 0.2
TNC-209ENST00000534839 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
TNC-209ENST00000534839 MYOM2P54296 1465 aa16.3■□□□□ 0.2
TNC-209ENST00000534839 PTPRUQ92729 1446 aa16.3■□□□□ 0.2
TNC-209ENST00000534839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.3■□□□□ 0.2
TNC-209ENST00000534839 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
TNC-209ENST00000534839 ATMINO43313 823 aaPredicted RBP16.3■□□□□ 0.2
TNC-209ENST00000534839 ZFP91Q96JP5 570 aaPredicted RBP16.3■□□□□ 0.2
TNC-209ENST00000534839 DCBLD2Q96PD2 775 aa16.3■□□□□ 0.2
TNC-209ENST00000534839 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
TNC-209ENST00000534839 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
TNC-209ENST00000534839 RIMS2Q9UQ26 1411 aa16.29■□□□□ 0.2
TNC-209ENST00000534839 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
TNC-209ENST00000534839 NINLQ9Y2I6 1382 aa16.29■□□□□ 0.2
TNC-209ENST00000534839 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
TNC-209ENST00000534839 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
TNC-209ENST00000534839 LAMC1P11047 1609 aa16.28■□□□□ 0.2
TNC-209ENST00000534839 ATN1P54259 1190 aaPredicted RBP16.28■□□□□ 0.2
TNC-209ENST00000534839 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
TNC-209ENST00000534839 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
TNC-209ENST00000534839 ARHGEF5Q12774 1597 aa16.28■□□□□ 0.2
TNC-209ENST00000534839 TRPM2O94759 1503 aa16.28■□□□□ 0.2
TNC-209ENST00000534839 EZH2Q15910 746 aaKnown RBP16.27■□□□□ 0.2
TNC-209ENST00000534839 EHBP1L1Q8N3D4 1523 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms