RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
PTP4A2-216ENST00000534796 SHPRHQ149N8 1683 aa15.91■□□□□ 0.14
PTP4A2-216ENST00000534796 SETD5Q9C0A6 1442 aa15.91■□□□□ 0.14
PTP4A2-216ENST00000534796 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
PTP4A2-216ENST00000534796 LRP6O75581 1613 aa15.89■□□□□ 0.13
PTP4A2-216ENST00000534796 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
PTP4A2-216ENST00000534796 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
PTP4A2-216ENST00000534796 C1orf167Q5SNV9 1468 aa15.87■□□□□ 0.13
PTP4A2-216ENST00000534796 NALCNQ8IZF0 1738 aa15.86■□□□□ 0.13
PTP4A2-216ENST00000534796 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
PTP4A2-216ENST00000534796 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
PTP4A2-216ENST00000534796 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
PTP4A2-216ENST00000534796 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
PTP4A2-216ENST00000534796 PPLO60437 1756 aa15.85■□□□□ 0.13
PTP4A2-216ENST00000534796 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
PTP4A2-216ENST00000534796 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
PTP4A2-216ENST00000534796 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
PTP4A2-216ENST00000534796 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
PTP4A2-216ENST00000534796 ADGRF5Q8IZF2 1346 aa15.83■□□□□ 0.12
PTP4A2-216ENST00000534796 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
PTP4A2-216ENST00000534796 RXRBP28702 533 aa15.81■□□□□ 0.12
PTP4A2-216ENST00000534796 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
PTP4A2-216ENST00000534796 TECPR2O15040 1411 aa15.8■□□□□ 0.12
PTP4A2-216ENST00000534796 LRPPRCP42704 1394 aaKnown RBP15.8■□□□□ 0.12
PTP4A2-216ENST00000534796 SOS2Q07890 1332 aaPredicted RBP15.8■□□□□ 0.12
PTP4A2-216ENST00000534796 ORAI2Q96SN7 254 aa15.8■□□□□ 0.12
PTP4A2-216ENST00000534796 ABCC11Q96J66 1382 aa15.79■□□□□ 0.12
PTP4A2-216ENST00000534796 AFF2P51816 1311 aa15.79■□□□□ 0.12
PTP4A2-216ENST00000534796 LAMC1P11047 1609 aa15.79■□□□□ 0.12
PTP4A2-216ENST00000534796 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
PTP4A2-216ENST00000534796 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
PTP4A2-216ENST00000534796 NPHP3Q7Z494 1330 aa15.78■□□□□ 0.12
PTP4A2-216ENST00000534796 POLA2Q14181 598 aa15.78■□□□□ 0.12
PTP4A2-216ENST00000534796 STK26Q9P289 416 aa15.78■□□□□ 0.12
PTP4A2-216ENST00000534796 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
PTP4A2-216ENST00000534796 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
PTP4A2-216ENST00000534796 C8orf37Q96NL8 207 aa15.77■□□□□ 0.12
PTP4A2-216ENST00000534796 SIRT1Q96EB6 747 aa15.75■□□□□ 0.11
PTP4A2-216ENST00000534796 IFT172Q9UG01 1749 aa15.74■□□□□ 0.11
PTP4A2-216ENST00000534796 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
PTP4A2-216ENST00000534796 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
PTP4A2-216ENST00000534796 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
PTP4A2-216ENST00000534796 C14orf93Q9H972 538 aaKnown RBP15.74■□□□□ 0.11
PTP4A2-216ENST00000534796 YTHDC2Q9H6S0 1430 aaKnown RBP15.74■□□□□ 0.11
PTP4A2-216ENST00000534796 MYOM2P54296 1465 aa15.73■□□□□ 0.11
PTP4A2-216ENST00000534796 ADAMTS2O95450 1211 aa15.73■□□□□ 0.11
PTP4A2-216ENST00000534796 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
PTP4A2-216ENST00000534796 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
PTP4A2-216ENST00000534796 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
PTP4A2-216ENST00000534796 RAB3GAP2Q9H2M9 1393 aa15.73■□□□□ 0.11
PTP4A2-216ENST00000534796 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.11
PTP4A2-216ENST00000534796 FOXO3O43524 673 aa15.71■□□□□ 0.11
PTP4A2-216ENST00000534796 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.1
PTP4A2-216ENST00000534796 UPF1Q92900 1129 aaKnown RBP eCLIP15.7■□□□□ 0.17e-10■□□□□ 8.5
PTP4A2-216ENST00000534796 USP21Q9UK80 565 aa15.69■□□□□ 0.1
PTP4A2-216ENST00000534796 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
PTP4A2-216ENST00000534796 PXDNQ92626 1479 aa15.69■□□□□ 0.1
PTP4A2-216ENST00000534796 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 NUTM2FA1L443 756 aa15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 HRCP23327 699 aa15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 STAC3Q96MF2 364 aa15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
PTP4A2-216ENST00000534796 RGS12O14924 1447 aa15.66■□□□□ 0.1
PTP4A2-216ENST00000534796 KIF1AQ12756 1690 aa15.65■□□□□ 0.1
PTP4A2-216ENST00000534796 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
PTP4A2-216ENST00000534796 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
PTP4A2-216ENST00000534796 POGKQ9P215 609 aa15.65■□□□□ 0.1
PTP4A2-216ENST00000534796 PSME1Q06323 249 aa15.64■□□□□ 0.09
PTP4A2-216ENST00000534796 FMN2Q9NZ56 1722 aa15.64■□□□□ 0.09
PTP4A2-216ENST00000534796 SPATA31A3Q5VYP0 1347 aa15.64■□□□□ 0.09
PTP4A2-216ENST00000534796 DLC1Q96QB1 1528 aa15.63■□□□□ 0.09
PTP4A2-216ENST00000534796 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
PTP4A2-216ENST00000534796 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
PTP4A2-216ENST00000534796 ATRNO75882 1429 aa15.61■□□□□ 0.09
PTP4A2-216ENST00000534796 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
PTP4A2-216ENST00000534796 DCAF11Q8TEB1 546 aa15.61■□□□□ 0.09
PTP4A2-216ENST00000534796 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
PTP4A2-216ENST00000534796 ATAD2Q6PL18 1390 aa15.61■□□□□ 0.09
PTP4A2-216ENST00000534796 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.099e-10■□□□□ 9.7
PTP4A2-216ENST00000534796 HAP1P54257 671 aaPredicted RBP15.59■□□□□ 0.09
PTP4A2-216ENST00000534796 KDM2AQ9Y2K7 1162 aa15.59■□□□□ 0.09
PTP4A2-216ENST00000534796 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
PTP4A2-216ENST00000534796 TNS3Q68CZ2 1445 aa15.59■□□□□ 0.09
PTP4A2-216ENST00000534796 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
PTP4A2-216ENST00000534796 ADGRB1O14514 1584 aa15.58■□□□□ 0.09
PTP4A2-216ENST00000534796 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.08
PTP4A2-216ENST00000534796 ARHGEF10O15013 1369 aa15.58■□□□□ 0.08
PTP4A2-216ENST00000534796 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
PTP4A2-216ENST00000534796 ADGRB2O60241 1585 aa15.57■□□□□ 0.08
PTP4A2-216ENST00000534796 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
PTP4A2-216ENST00000534796 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
PTP4A2-216ENST00000534796 SLIT2O94813 1529 aa15.54■□□□□ 0.08
PTP4A2-216ENST00000534796 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
PTP4A2-216ENST00000534796 LMOD2Q6P5Q4 547 aa15.54■□□□□ 0.08
PTP4A2-216ENST00000534796 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
PTP4A2-216ENST00000534796 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
PTP4A2-216ENST00000534796 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
PTP4A2-216ENST00000534796 HIRIP3Q9BW71 556 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms