RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
UPK2-202ENST00000534788 PXDNQ92626 1479 aa20.26■□□□□ 0.83
UPK2-202ENST00000534788 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
UPK2-202ENST00000534788 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
UPK2-202ENST00000534788 RRBP1Q9P2E9 1410 aaKnown RBP20.26■□□□□ 0.83
UPK2-202ENST00000534788 EP400Q96L91 3159 aa20.26■□□□□ 0.83
UPK2-202ENST00000534788 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.25■□□□□ 0.83
UPK2-202ENST00000534788 VGFO15240 615 aaPredicted RBP20.23■□□□□ 0.83
UPK2-202ENST00000534788 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
UPK2-202ENST00000534788 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
UPK2-202ENST00000534788 FOXD1Q16676 465 aa20.2■□□□□ 0.82
UPK2-202ENST00000534788 NAIPQ13075 1403 aa20.19■□□□□ 0.82
UPK2-202ENST00000534788 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
UPK2-202ENST00000534788 CCDC125Q86Z20 511 aa20.19■□□□□ 0.82
UPK2-202ENST00000534788 GLI3P10071 1580 aa20.19■□□□□ 0.82
UPK2-202ENST00000534788 BRWD3Q6RI45 1802 aa20.18■□□□□ 0.82
UPK2-202ENST00000534788 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
UPK2-202ENST00000534788 GJD4Q96KN9 370 aaPredicted RBP20.17■□□□□ 0.82
UPK2-202ENST00000534788 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
UPK2-202ENST00000534788 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
UPK2-202ENST00000534788 FOXO3O43524 673 aa20.15■□□□□ 0.82
UPK2-202ENST00000534788 FMN2Q9NZ56 1722 aa20.15■□□□□ 0.82
UPK2-202ENST00000534788 IFT172Q9UG01 1749 aa20.14■□□□□ 0.81
UPK2-202ENST00000534788 USP32Q8NFA0 1604 aa20.14■□□□□ 0.81
UPK2-202ENST00000534788 SLIT2O94813 1529 aa20.14■□□□□ 0.81
UPK2-202ENST00000534788 RALGAPBQ86X10 1494 aa20.14■□□□□ 0.81
UPK2-202ENST00000534788 KIF1AQ12756 1690 aa20.13■□□□□ 0.81
UPK2-202ENST00000534788 TECPR2O15040 1411 aa20.12■□□□□ 0.81
UPK2-202ENST00000534788 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
UPK2-202ENST00000534788 LRPPRCP42704 1394 aaKnown RBP20.11■□□□□ 0.81
UPK2-202ENST00000534788 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
UPK2-202ENST00000534788 RGPD8O14715 1765 aaPredicted RBP20.1■□□□□ 0.81
UPK2-202ENST00000534788 PLCH1Q4KWH8 1693 aa20.1■□□□□ 0.81
UPK2-202ENST00000534788 UNC5CLQ8IV45 518 aa20.09■□□□□ 0.81
UPK2-202ENST00000534788 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.81
UPK2-202ENST00000534788 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
UPK2-202ENST00000534788 WAPLQ7Z5K2 1190 aa20.08■□□□□ 0.81
UPK2-202ENST00000534788 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.8
UPK2-202ENST00000534788 NWD2Q9ULI1 1742 aa20.07■□□□□ 0.8
UPK2-202ENST00000534788 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
UPK2-202ENST00000534788 LRP5O75197 1615 aa20.07■□□□□ 0.8
UPK2-202ENST00000534788 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
UPK2-202ENST00000534788 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
UPK2-202ENST00000534788 DEFB132Q7Z7B7 95 aa20.05■□□□□ 0.8
UPK2-202ENST00000534788 STK26Q9P289 416 aa20.05■□□□□ 0.8
UPK2-202ENST00000534788 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
UPK2-202ENST00000534788 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.8
UPK2-202ENST00000534788 TNS3Q68CZ2 1445 aa20.02■□□□□ 0.79
UPK2-202ENST00000534788 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.79
UPK2-202ENST00000534788 SEPT12Q8IYM1 358 aa20.01■□□□□ 0.79
UPK2-202ENST00000534788 PIK3C2GO75747 1445 aa20.01■□□□□ 0.79
UPK2-202ENST00000534788 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
UPK2-202ENST00000534788 KRT28Q7Z3Y7 464 aa20■□□□□ 0.79
UPK2-202ENST00000534788 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
UPK2-202ENST00000534788 NRAPQ86VF7 1730 aa19.99■□□□□ 0.79
UPK2-202ENST00000534788 ANKRD30BQ9BXX2 1392 aa19.99■□□□□ 0.79
UPK2-202ENST00000534788 VPS72Q15906 364 aa19.99■□□□□ 0.79
UPK2-202ENST00000534788 ONECUT3O60422 494 aaPredicted RBP19.97■□□□□ 0.79
UPK2-202ENST00000534788 SF3B2Q13435 895 aaKnown RBP19.97■□□□□ 0.79
UPK2-202ENST00000534788 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
UPK2-202ENST00000534788 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
UPK2-202ENST00000534788 NRXN1Q9ULB1 1477 aa19.97■□□□□ 0.79
UPK2-202ENST00000534788 HAP1P54257 671 aaPredicted RBP19.94■□□□□ 0.78
UPK2-202ENST00000534788 KRT27Q7Z3Y8 459 aa19.94■□□□□ 0.78
UPK2-202ENST00000534788 PHF8Q9UPP1 1060 aa19.94■□□□□ 0.78
UPK2-202ENST00000534788 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
UPK2-202ENST00000534788 TRPM3Q9HCF6 1732 aaPredicted RBP19.93■□□□□ 0.78
UPK2-202ENST00000534788 RGPD1P0DJD0 1748 aa19.93■□□□□ 0.78
UPK2-202ENST00000534788 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
UPK2-202ENST00000534788 PSME1Q06323 249 aa19.92■□□□□ 0.78
UPK2-202ENST00000534788 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
UPK2-202ENST00000534788 CCDC9Q9Y3X0 531 aaKnown RBP19.92■□□□□ 0.78
UPK2-202ENST00000534788 ARHGEF10O15013 1369 aa19.91■□□□□ 0.78
UPK2-202ENST00000534788 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
UPK2-202ENST00000534788 PSDA5PKW4 1024 aaPredicted RBP19.89■□□□□ 0.77
UPK2-202ENST00000534788 FAM83GA6ND36 823 aa19.89■□□□□ 0.77
UPK2-202ENST00000534788 COL14A1Q05707 1796 aaKnown RBP19.89■□□□□ 0.77
UPK2-202ENST00000534788 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
UPK2-202ENST00000534788 CRYBG1Q9Y4K1 1723 aa19.88■□□□□ 0.77
UPK2-202ENST00000534788 ADGRB2O60241 1585 aa19.88■□□□□ 0.77
UPK2-202ENST00000534788 HRCP23327 699 aa19.87■□□□□ 0.77
UPK2-202ENST00000534788 BAG6P46379 1132 aa19.87■□□□□ 0.77
UPK2-202ENST00000534788 LMOD2Q6P5Q4 547 aa19.87■□□□□ 0.77
UPK2-202ENST00000534788 C14orf93Q9H972 538 aaKnown RBP19.87■□□□□ 0.77
UPK2-202ENST00000534788 MPHOSPH9Q99550 1183 aa19.86■□□□□ 0.77
UPK2-202ENST00000534788 ANKARQ7Z5J8 1434 aa19.85■□□□□ 0.77
UPK2-202ENST00000534788 THSD7AQ9UPZ6 1657 aa19.85■□□□□ 0.77
UPK2-202ENST00000534788 FAM98CQ17RN3 349 aaKnown RBP19.85■□□□□ 0.77
UPK2-202ENST00000534788 DLC1Q96QB1 1528 aa19.85■□□□□ 0.77
UPK2-202ENST00000534788 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
UPK2-202ENST00000534788 A0A0G2JS52 829 aa19.84■□□□□ 0.77
UPK2-202ENST00000534788 MYT1Q01538 1121 aa19.84■□□□□ 0.77
UPK2-202ENST00000534788 CFAP70Q5T0N1 1121 aa19.84■□□□□ 0.77
UPK2-202ENST00000534788 PRAM1Q96QH2 718 aa19.84■□□□□ 0.77
UPK2-202ENST00000534788 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
UPK2-202ENST00000534788 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.77
UPK2-202ENST00000534788 BTG4Q9NY30 223 aa19.82■□□□□ 0.76
UPK2-202ENST00000534788 EN1Q05925 392 aaPredicted RBP19.81■□□□□ 0.76
UPK2-202ENST00000534788 DISP2A7MBM2 1401 aa19.81■□□□□ 0.76
UPK2-202ENST00000534788 FAM182BQ5T319 152 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms