RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
CCDC90B-219ENST00000534753 TRPM2O94759 1503 aa13.23□□□□□ -0.29
CCDC90B-219ENST00000534753 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
CCDC90B-219ENST00000534753 HSPA1LP34931 641 aa13.22□□□□□ -0.29
CCDC90B-219ENST00000534753 TBX22Q9Y458 520 aa13.22□□□□□ -0.29
CCDC90B-219ENST00000534753 KIF1BO60333 1816 aa13.21□□□□□ -0.29
CCDC90B-219ENST00000534753 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
CCDC90B-219ENST00000534753 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
CCDC90B-219ENST00000534753 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
CCDC90B-219ENST00000534753 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
CCDC90B-219ENST00000534753 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
CCDC90B-219ENST00000534753 KDM2AQ9Y2K7 1162 aa13.19□□□□□ -0.3
CCDC90B-219ENST00000534753 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
CCDC90B-219ENST00000534753 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-219ENST00000534753 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-219ENST00000534753 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
CCDC90B-219ENST00000534753 CCDC144AA2RUR9 1427 aa13.18□□□□□ -0.3
CCDC90B-219ENST00000534753 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
CCDC90B-219ENST00000534753 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-219ENST00000534753 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
CCDC90B-219ENST00000534753 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-219ENST00000534753 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-219ENST00000534753 PYGBP11216 843 aa13.16□□□□□ -0.3
CCDC90B-219ENST00000534753 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
CCDC90B-219ENST00000534753 MSH6P52701 1360 aa13.16□□□□□ -0.3
CCDC90B-219ENST00000534753 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
CCDC90B-219ENST00000534753 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
CCDC90B-219ENST00000534753 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
CCDC90B-219ENST00000534753 METP08581 1390 aa13.14□□□□□ -0.31
CCDC90B-219ENST00000534753 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
CCDC90B-219ENST00000534753 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-219ENST00000534753 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
CCDC90B-219ENST00000534753 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
CCDC90B-219ENST00000534753 SETBP1Q9Y6X0 1596 aa13.12□□□□□ -0.31
CCDC90B-219ENST00000534753 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
CCDC90B-219ENST00000534753 ATF3P18847 181 aa13.12□□□□□ -0.31
CCDC90B-219ENST00000534753 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
CCDC90B-219ENST00000534753 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-219ENST00000534753 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
CCDC90B-219ENST00000534753 HAX1O00165 279 aa13.1□□□□□ -0.31
CCDC90B-219ENST00000534753 PPLO60437 1756 aa13.09□□□□□ -0.31
CCDC90B-219ENST00000534753 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
CCDC90B-219ENST00000534753 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-219ENST00000534753 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
CCDC90B-219ENST00000534753 STK26Q9P289 416 aa13.09□□□□□ -0.31
CCDC90B-219ENST00000534753 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-219ENST00000534753 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.32
CCDC90B-219ENST00000534753 SPATA31E1Q6ZUB1 1445 aa13.07□□□□□ -0.32
CCDC90B-219ENST00000534753 STK25O00506 426 aa13.07□□□□□ -0.32
CCDC90B-219ENST00000534753 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
CCDC90B-219ENST00000534753 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-219ENST00000534753 FAM135BQ49AJ0 1406 aa13.06□□□□□ -0.32
CCDC90B-219ENST00000534753 XRN1Q8IZH2 1706 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-219ENST00000534753 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-219ENST00000534753 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
CCDC90B-219ENST00000534753 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
CCDC90B-219ENST00000534753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-219ENST00000534753 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-219ENST00000534753 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-219ENST00000534753 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
CCDC90B-219ENST00000534753 HRCP23327 699 aa13.04□□□□□ -0.32
CCDC90B-219ENST00000534753 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
CCDC90B-219ENST00000534753 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
CCDC90B-219ENST00000534753 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
CCDC90B-219ENST00000534753 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-219ENST00000534753 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-219ENST00000534753 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
CCDC90B-219ENST00000534753 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
CCDC90B-219ENST00000534753 WAPLQ7Z5K2 1190 aa13.01□□□□□ -0.33
CCDC90B-219ENST00000534753 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-219ENST00000534753 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
CCDC90B-219ENST00000534753 PHLPP1O60346 1717 aa13.01□□□□□ -0.33
CCDC90B-219ENST00000534753 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
CCDC90B-219ENST00000534753 BRINP3Q76B58 766 aa13□□□□□ -0.33
CCDC90B-219ENST00000534753 STK24Q9Y6E0 443 aa13□□□□□ -0.33
CCDC90B-219ENST00000534753 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
CCDC90B-219ENST00000534753 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
CCDC90B-219ENST00000534753 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
CCDC90B-219ENST00000534753 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-219ENST00000534753 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC90B-219ENST00000534753 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC90B-219ENST00000534753 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-219ENST00000534753 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-219ENST00000534753 MST1RQ04912 1400 aa12.97□□□□□ -0.33
CCDC90B-219ENST00000534753 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
CCDC90B-219ENST00000534753 DCCP43146 1447 aa12.96□□□□□ -0.33
CCDC90B-219ENST00000534753 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-219ENST00000534753 DHX57Q6P158 1386 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-219ENST00000534753 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
CCDC90B-219ENST00000534753 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 ASXL1Q8IXJ9 1541 aa12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 POGKQ9P215 609 aa12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 MYOM2P54296 1465 aa12.95□□□□□ -0.34
CCDC90B-219ENST00000534753 JCADQ9P266 1359 aa12.94□□□□□ -0.34
CCDC90B-219ENST00000534753 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
CCDC90B-219ENST00000534753 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms