RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 GOLGA6L1Q8N7Z2 621 aa12.54□□□□□ -0.4
NCAPD3-214ENST00000534548 ADGRL2O95490 1459 aa12.54□□□□□ -0.4
NCAPD3-214ENST00000534548 TEX35Q5T0J7 233 aa12.54□□□□□ -0.4
NCAPD3-214ENST00000534548 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
NCAPD3-214ENST00000534548 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
NCAPD3-214ENST00000534548 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
NCAPD3-214ENST00000534548 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
NCAPD3-214ENST00000534548 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
NCAPD3-214ENST00000534548 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
NCAPD3-214ENST00000534548 HAP1P54257 671 aaPredicted RBP12.52□□□□□ -0.4
NCAPD3-214ENST00000534548 ZHX1Q9UKY1 873 aaPredicted RBP12.52□□□□□ -0.4
NCAPD3-214ENST00000534548 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.4
NCAPD3-214ENST00000534548 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
NCAPD3-214ENST00000534548 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
NCAPD3-214ENST00000534548 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
NCAPD3-214ENST00000534548 TPM4P67936 248 aa12.51□□□□□ -0.41
NCAPD3-214ENST00000534548 TESK2Q96S53 571 aa12.51□□□□□ -0.41
NCAPD3-214ENST00000534548 ATP6V1DQ9Y5K8 247 aa12.51□□□□□ -0.41
NCAPD3-214ENST00000534548 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.41
NCAPD3-214ENST00000534548 BCAR3O75815 825 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 GOLGA6L19H0YKK7 550 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 HMMRO75330 724 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 CCDC141Q6ZP82 1450 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
NCAPD3-214ENST00000534548 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
NCAPD3-214ENST00000534548 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
NCAPD3-214ENST00000534548 REC8O95072 547 aa12.49□□□□□ -0.41
NCAPD3-214ENST00000534548 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
NCAPD3-214ENST00000534548 ERBINQ96RT1 1412 aa12.49□□□□□ -0.41
NCAPD3-214ENST00000534548 CBX1P83916 185 aa12.49□□□□□ -0.41
NCAPD3-214ENST00000534548 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 MBD3O95983 291 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 GPS2Q13227 327 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 MPNDQ8N594 471 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 RRAGDQ9NQL2 400 aaPredicted RBP12.48□□□□□ -0.41
NCAPD3-214ENST00000534548 TAF3Q5VWG9 929 aa12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 SASS6Q6UVJ0 657 aa12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 ABCC10Q5T3U5 1492 aa12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 BECN2A8MW95 431 aa12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 TPM3P06753 285 aa12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
NCAPD3-214ENST00000534548 ARHGEF12Q9NZN5 1544 aa12.46□□□□□ -0.41
NCAPD3-214ENST00000534548 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
NCAPD3-214ENST00000534548 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.42
NCAPD3-214ENST00000534548 SETQ01105 290 aaPredicted RBP12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 KIF3AQ9Y496 699 aa12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 KIF3BO15066 747 aa12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 SPAG9O60271 1321 aaKnown RBP12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 PDCL2Q8N4E4 241 aa12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 CDC45O75419 566 aa12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 RILPL2Q969X0 211 aa12.45□□□□□ -0.42
NCAPD3-214ENST00000534548 PDE4CQ08493 712 aa12.44□□□□□ -0.42
NCAPD3-214ENST00000534548 NUP160Q12769 1436 aa12.44□□□□□ -0.42
NCAPD3-214ENST00000534548 A2MP01023 1474 aa12.44□□□□□ -0.42
NCAPD3-214ENST00000534548 SYCP2Q9BX26 1530 aa12.44□□□□□ -0.42
NCAPD3-214ENST00000534548 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 NOM1Q5C9Z4 860 aaKnown RBP12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 ARGLU1Q9NWB6 273 aaPredicted RBP12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 TPD52L1Q16890 204 aaPredicted RBP12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 APPP05067 770 aa12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 CDC42BPAQ5VT25 1732 aa12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 POLR1AO95602 1720 aaPredicted RBP12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 HSP90B1P14625 803 aaKnown RBP12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 RUNDC1Q96C34 613 aa12.43□□□□□ -0.42
NCAPD3-214ENST00000534548 HOMER1Q86YM7 354 aa12.42□□□□□ -0.42
NCAPD3-214ENST00000534548 RABEP1Q15276 862 aa12.42□□□□□ -0.42
NCAPD3-214ENST00000534548 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
NCAPD3-214ENST00000534548 DYNC1I1O14576 645 aa12.41□□□□□ -0.42
NCAPD3-214ENST00000534548 PLA2R1Q13018 1463 aa12.41□□□□□ -0.42
NCAPD3-214ENST00000534548 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
NCAPD3-214ENST00000534548 PLEKHH1Q9ULM0 1364 aa12.41□□□□□ -0.42
NCAPD3-214ENST00000534548 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
NCAPD3-214ENST00000534548 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
NCAPD3-214ENST00000534548 LETM1O95202 739 aaPredicted RBP12.4□□□□□ -0.42
NCAPD3-214ENST00000534548 CWC15Q9P013 229 aaKnown RBP12.4□□□□□ -0.42
NCAPD3-214ENST00000534548 SPC24Q8NBT2 197 aa12.4□□□□□ -0.42
NCAPD3-214ENST00000534548 TNPO1Q92973 898 aaKnown RBP12.4□□□□□ -0.42
NCAPD3-214ENST00000534548 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 CWC22Q9HCG8 908 aaKnown RBP12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 COL17A1Q9UMD9 1497 aaPredicted RBP12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 MNS1Q8NEH6 495 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms