RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 L3MBTL2Q969R5 705 aa30.95■■■□□ 2.55
PKP3-211ENST00000534401 AHDC1Q5TGY3 1603 aaPredicted RBP30.94■■■□□ 2.54
PKP3-211ENST00000534401 C1orf167Q5SNV9 1468 aa30.92■■■□□ 2.54
PKP3-211ENST00000534401 PHLPP1O60346 1717 aa30.9■■■□□ 2.54
PKP3-211ENST00000534401 COL16A1Q07092 1604 aaPredicted RBP30.88■■■□□ 2.53
PKP3-211ENST00000534401 NEUROD1Q13562 356 aa30.86■■■□□ 2.53
PKP3-211ENST00000534401 NHSL1Q5SYE7 1610 aa30.86■■■□□ 2.53
PKP3-211ENST00000534401 PRAM1Q96QH2 718 aa30.85■■■□□ 2.53
PKP3-211ENST00000534401 TRAK1Q9UPV9 953 aa30.83■■■□□ 2.53
PKP3-211ENST00000534401 FMN2Q9NZ56 1722 aa30.83■■■□□ 2.53
PKP3-211ENST00000534401 ADGRB2O60241 1585 aa30.81■■■□□ 2.52
PKP3-211ENST00000534401 NBPF1Q3BBV0 1214 aa30.81■■■□□ 2.52
PKP3-211ENST00000534401 ARHGEF28Q8N1W1 1705 aaKnown RBP30.81■■■□□ 2.52
PKP3-211ENST00000534401 ORAI2Q96SN7 254 aa30.79■■■□□ 2.52
PKP3-211ENST00000534401 MED1Q15648 1581 aaPredicted RBP30.79■■■□□ 2.52
PKP3-211ENST00000534401 PCGF6Q9BYE7 350 aa30.78■■■□□ 2.52
PKP3-211ENST00000534401 POGKQ9P215 609 aa30.77■■■□□ 2.52
PKP3-211ENST00000534401 TRPM1Q7Z4N2 1603 aa30.76■■■□□ 2.52
PKP3-211ENST00000534401 JCADQ9P266 1359 aa30.76■■■□□ 2.51
PKP3-211ENST00000534401 SAFB2Q14151 953 aaKnown RBP eCLIP30.72■■■□□ 2.51
PKP3-211ENST00000534401 SHPRHQ149N8 1683 aa30.71■■■□□ 2.51
PKP3-211ENST00000534401 SOS2Q07890 1332 aaPredicted RBP30.71■■■□□ 2.51
PKP3-211ENST00000534401 NBPF8Q3BBV2 869 aa30.7■■■□□ 2.51
PKP3-211ENST00000534401 DDX17Q92841 729 aaKnown RBP30.69■■■□□ 2.5
PKP3-211ENST00000534401 CLSPNQ9HAW4 1339 aa30.69■■■□□ 2.5
PKP3-211ENST00000534401 RGPD8O14715 1765 aaPredicted RBP30.69■■■□□ 2.5
PKP3-211ENST00000534401 ANKARQ7Z5J8 1434 aa30.68■■■□□ 2.5
PKP3-211ENST00000534401 ESCO1Q5FWF5 840 aa30.68■■■□□ 2.5
PKP3-211ENST00000534401 USP32Q8NFA0 1604 aa30.67■■■□□ 2.5
PKP3-211ENST00000534401 GPRASP1Q5JY77 1395 aa30.66■■■□□ 2.5
PKP3-211ENST00000534401 TONSLQ96HA7 1378 aa30.66■■■□□ 2.5
PKP3-211ENST00000534401 LRRC59Q96AG4 307 aaKnown RBP30.66■■■□□ 2.5
PKP3-211ENST00000534401 MINK1Q8N4C8 1332 aaPredicted RBP30.65■■■□□ 2.5
PKP3-211ENST00000534401 NUTM2FA1L443 756 aa30.64■■■□□ 2.5
PKP3-211ENST00000534401 WASLO00401 505 aaPredicted RBP30.64■■■□□ 2.5
PKP3-211ENST00000534401 SPATA31A6Q5VVP1 1343 aa30.64■■■□□ 2.5
PKP3-211ENST00000534401 KIF1AQ12756 1690 aa30.64■■■□□ 2.5
PKP3-211ENST00000534401 NPHP3Q7Z494 1330 aa30.63■■■□□ 2.49
PKP3-211ENST00000534401 PXDNQ92626 1479 aa30.63■■■□□ 2.49
PKP3-211ENST00000534401 HIRIP3Q9BW71 556 aaPredicted RBP30.61■■■□□ 2.49
PKP3-211ENST00000534401 TULP4Q9NRJ4 1543 aa30.61■■■□□ 2.49
PKP3-211ENST00000534401 EIF3AQ14152 1382 aaKnown RBP30.6■■■□□ 2.49
PKP3-211ENST00000534401 PRR36Q9H6K5 1346 aa30.59■■■□□ 2.49
PKP3-211ENST00000534401 ROCK2O75116 1388 aaKnown RBP30.58■■■□□ 2.49
PKP3-211ENST00000534401 PNPLA6Q8IY17 1366 aa30.58■■■□□ 2.49
PKP3-211ENST00000534401 FOXO3O43524 673 aa30.58■■■□□ 2.49
PKP3-211ENST00000534401 CENPJQ9HC77 1338 aaPredicted RBP30.57■■■□□ 2.48
PKP3-211ENST00000534401 PHF8Q9UPP1 1060 aa30.57■■■□□ 2.48
PKP3-211ENST00000534401 RALGAPBQ86X10 1494 aa30.57■■■□□ 2.48
PKP3-211ENST00000534401 LRP6O75581 1613 aa30.55■■■□□ 2.48
PKP3-211ENST00000534401 TIMELESSQ9UNS1 1208 aa30.54■■■□□ 2.48
PKP3-211ENST00000534401 ATP7BP35670 1465 aa30.52■■■□□ 2.48
PKP3-211ENST00000534401 RGS17Q9UGC6 210 aaPredicted RBP30.52■■■□□ 2.48
PKP3-211ENST00000534401 QRICH2Q9H0J4 1663 aa30.52■■■□□ 2.48
PKP3-211ENST00000534401 COL22A1Q8NFW1 1626 aaPredicted RBP30.51■■■□□ 2.48
PKP3-211ENST00000534401 CDK19Q9BWU1 502 aa30.51■■■□□ 2.47
PKP3-211ENST00000534401 NUDT16Q96DE0 195 aaKnown RBP30.48■■■□□ 2.47
PKP3-211ENST00000534401 KRT28Q7Z3Y7 464 aa30.47■■■□□ 2.47
PKP3-211ENST00000534401 ITSN1Q15811 1721 aa30.47■■■□□ 2.47
PKP3-211ENST00000534401 SPATA31A3Q5VYP0 1347 aa30.46■■■□□ 2.47
PKP3-211ENST00000534401 TOPAZ1Q8N9V7 1692 aa30.46■■■□□ 2.47
PKP3-211ENST00000534401 XPCQ01831 940 aaPredicted RBP30.45■■■□□ 2.47
PKP3-211ENST00000534401 SBNO1A3KN83 1393 aa30.44■■■□□ 2.46
PKP3-211ENST00000534401 PHF23Q9BUL5 403 aaPredicted RBP30.44■■■□□ 2.46
PKP3-211ENST00000534401 SBNO2Q9Y2G9 1366 aa30.43■■■□□ 2.46
PKP3-211ENST00000534401 PMFBP1Q8TBY8 1022 aa30.43■■■□□ 2.46
PKP3-211ENST00000534401 CARD11Q9BXL7 1154 aa30.43■■■□□ 2.46
PKP3-211ENST00000534401 PSME1Q06323 249 aa30.42■■■□□ 2.46
PKP3-211ENST00000534401 CCDC61Q9Y6R9 512 aa30.42■■■□□ 2.46
PKP3-211ENST00000534401 TRPM3Q9HCF6 1732 aaPredicted RBP30.42■■■□□ 2.46
PKP3-211ENST00000534401 PLEKHG3A1L390 1219 aa30.41■■■□□ 2.46
PKP3-211ENST00000534401 POLR3AO14802 1390 aaPredicted RBP30.39■■■□□ 2.45
PKP3-211ENST00000534401 TNS3Q68CZ2 1445 aa30.39■■■□□ 2.45
PKP3-211ENST00000534401 NUTM2BA6NNL0 878 aaPredicted RBP30.37■■■□□ 2.45
PKP3-211ENST00000534401 NUTM2EB1AL46 878 aaPredicted RBP30.37■■■□□ 2.45
PKP3-211ENST00000534401 NUTM2AQ8IVF1 878 aaPredicted RBP30.37■■■□□ 2.45
PKP3-211ENST00000534401 EVC2Q86UK5 1308 aa30.35■■■□□ 2.45
PKP3-211ENST00000534401 ALS2Q96Q42 1657 aa30.34■■■□□ 2.45
PKP3-211ENST00000534401 CCER1Q8TC90 406 aaPredicted RBP30.34■■■□□ 2.45
PKP3-211ENST00000534401 CABP2Q9NPB3 220 aa30.33■■■□□ 2.45
PKP3-211ENST00000534401 SRPK2P78362 688 aaKnown RBP30.32■■■□□ 2.44
PKP3-211ENST00000534401 POTEAQ6S8J7 498 aa30.32■■■□□ 2.44
PKP3-211ENST00000534401 NGDNQ8NEJ9 315 aaKnown RBP30.32■■■□□ 2.44
PKP3-211ENST00000534401 ARHGEF10O15013 1369 aa30.31■■■□□ 2.44
PKP3-211ENST00000534401 MEX3CQ5U5Q3 659 aaKnown RBP30.31■■■□□ 2.44
PKP3-211ENST00000534401 ACEP12821 1306 aa30.3■■■□□ 2.44
PKP3-211ENST00000534401 MARF1Q9Y4F3 1742 aaKnown RBP30.29■■■□□ 2.44
PKP3-211ENST00000534401 PPIP5K1Q6PFW1 1433 aa30.28■■■□□ 2.44
PKP3-211ENST00000534401 ZNF772Q68DY9 489 aaPredicted RBP30.26■■■□□ 2.43
PKP3-211ENST00000534401 TESK2Q96S53 571 aa30.26■■■□□ 2.43
PKP3-211ENST00000534401 AFF2P51816 1311 aa30.24■■■□□ 2.43
PKP3-211ENST00000534401 PUS7Q96PZ0 661 aaKnown RBP30.24■■■□□ 2.43
PKP3-211ENST00000534401 ABCA3Q99758 1704 aa30.24■■■□□ 2.43
PKP3-211ENST00000534401 ADAMTS2O95450 1211 aa30.23■■■□□ 2.43
PKP3-211ENST00000534401 FNBP4Q8N3X1 1017 aaPredicted RBP30.23■■■□□ 2.43
PKP3-211ENST00000534401 CABP1Q9NZU7 370 aa30.23■■■□□ 2.43
PKP3-211ENST00000534401 BRD4O60885 1362 aaPredicted RBP30.23■■■□□ 2.43
PKP3-211ENST00000534401 ATAD2Q6PL18 1390 aa30.21■■■□□ 2.43
PKP3-211ENST00000534401 ST20-MTHFSA0A0A6YYL1 179 aa30.21■■■□□ 2.43
PKP3-211ENST00000534401 C8orf37Q96NL8 207 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms