RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 USP21Q9UK80 565 aa14.47□□□□□ -0.09
SOX9-AS1-213ENST00000533996 LAMC1P11047 1609 aa14.47□□□□□ -0.09
SOX9-AS1-213ENST00000533996 ABCB7O75027 752 aa14.46□□□□□ -0.09
SOX9-AS1-213ENST00000533996 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
SOX9-AS1-213ENST00000533996 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
SOX9-AS1-213ENST00000533996 E9PCH4 1651 aa14.46□□□□□ -0.1
SOX9-AS1-213ENST00000533996 PTCH1Q13635 1447 aa14.45□□□□□ -0.1
SOX9-AS1-213ENST00000533996 ADAMTS2O95450 1211 aa14.44□□□□□ -0.1
SOX9-AS1-213ENST00000533996 ADGRL3Q9HAR2 1447 aa14.43□□□□□ -0.1
SOX9-AS1-213ENST00000533996 NRXN3Q9Y4C0 1643 aa14.43□□□□□ -0.1
SOX9-AS1-213ENST00000533996 SOS2Q07890 1332 aaPredicted RBP14.42□□□□□ -0.1
SOX9-AS1-213ENST00000533996 ATRNO75882 1429 aa14.42□□□□□ -0.1
SOX9-AS1-213ENST00000533996 IQGAP3Q86VI3 1631 aa14.42□□□□□ -0.1
SOX9-AS1-213ENST00000533996 EP400Q96L91 3159 aa14.42□□□□□ -0.1
SOX9-AS1-213ENST00000533996 DDX17Q92841 729 aaKnown RBP14.42□□□□□ -0.1
SOX9-AS1-213ENST00000533996 NALCNQ8IZF0 1738 aa14.41□□□□□ -0.1
SOX9-AS1-213ENST00000533996 COL22A1Q8NFW1 1626 aaPredicted RBP14.41□□□□□ -0.1
SOX9-AS1-213ENST00000533996 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
SOX9-AS1-213ENST00000533996 DSG3P32926 999 aa14.39□□□□□ -0.11
SOX9-AS1-213ENST00000533996 MARF1Q9Y4F3 1742 aaKnown RBP14.38□□□□□ -0.11
SOX9-AS1-213ENST00000533996 METP08581 1390 aa14.38□□□□□ -0.11
SOX9-AS1-213ENST00000533996 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
SOX9-AS1-213ENST00000533996 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
SOX9-AS1-213ENST00000533996 LRP5O75197 1615 aa14.36□□□□□ -0.11
SOX9-AS1-213ENST00000533996 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
SOX9-AS1-213ENST00000533996 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
SOX9-AS1-213ENST00000533996 BCL9LQ86UU0 1499 aa14.35□□□□□ -0.11
SOX9-AS1-213ENST00000533996 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.35□□□□□ -0.11
SOX9-AS1-213ENST00000533996 MYOM2P54296 1465 aa14.33□□□□□ -0.12
SOX9-AS1-213ENST00000533996 SPHKAPQ2M3C7 1700 aa14.33□□□□□ -0.12
SOX9-AS1-213ENST00000533996 FAM50AQ14320 339 aaKnown RBP14.33□□□□□ -0.12
SOX9-AS1-213ENST00000533996 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
SOX9-AS1-213ENST00000533996 ORAI2Q96SN7 254 aa14.33□□□□□ -0.12
SOX9-AS1-213ENST00000533996 SF3B2Q13435 895 aaKnown RBP14.31□□□□□ -0.12
SOX9-AS1-213ENST00000533996 NPHP3Q7Z494 1330 aa14.31□□□□□ -0.12
SOX9-AS1-213ENST00000533996 NUP155O75694 1391 aa14.31□□□□□ -0.12
SOX9-AS1-213ENST00000533996 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
SOX9-AS1-213ENST00000533996 LOC105371045A0A1W2PR82 267 aa14.3□□□□□ -0.12
SOX9-AS1-213ENST00000533996 PRAG1Q86YV5 1406 aa14.3□□□□□ -0.12
SOX9-AS1-213ENST00000533996 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
SOX9-AS1-213ENST00000533996 BRWD3Q6RI45 1802 aa14.28□□□□□ -0.12
SOX9-AS1-213ENST00000533996 UNC5CLQ8IV45 518 aa14.28□□□□□ -0.12
SOX9-AS1-213ENST00000533996 LRPPRCP42704 1394 aaKnown RBP14.27□□□□□ -0.12
SOX9-AS1-213ENST00000533996 KIF1BO60333 1816 aa14.27□□□□□ -0.13
SOX9-AS1-213ENST00000533996 GLI3P10071 1580 aa14.26□□□□□ -0.13
SOX9-AS1-213ENST00000533996 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
SOX9-AS1-213ENST00000533996 PXDNQ92626 1479 aa14.26□□□□□ -0.13
SOX9-AS1-213ENST00000533996 HFM1A2PYH4 1435 aa14.26□□□□□ -0.13
SOX9-AS1-213ENST00000533996 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
SOX9-AS1-213ENST00000533996 DEFB132Q7Z7B7 95 aa14.26□□□□□ -0.13
SOX9-AS1-213ENST00000533996 SLIT2O94813 1529 aa14.25□□□□□ -0.13
SOX9-AS1-213ENST00000533996 ROBO2Q9HCK4 1378 aa14.25□□□□□ -0.13
SOX9-AS1-213ENST00000533996 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
SOX9-AS1-213ENST00000533996 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
SOX9-AS1-213ENST00000533996 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
SOX9-AS1-213ENST00000533996 FOXO3O43524 673 aa14.21□□□□□ -0.13
SOX9-AS1-213ENST00000533996 HRCP23327 699 aa14.21□□□□□ -0.13
SOX9-AS1-213ENST00000533996 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.13
SOX9-AS1-213ENST00000533996 CLTCL1P53675 1640 aa14.21□□□□□ -0.13
SOX9-AS1-213ENST00000533996 RPGRIP1LQ68CZ1 1315 aa14.2□□□□□ -0.14
SOX9-AS1-213ENST00000533996 BAG6P46379 1132 aa14.2□□□□□ -0.14
SOX9-AS1-213ENST00000533996 VPS72Q15906 364 aa14.2□□□□□ -0.14
SOX9-AS1-213ENST00000533996 NWD2Q9ULI1 1742 aa14.2□□□□□ -0.14
SOX9-AS1-213ENST00000533996 KRT27Q7Z3Y8 459 aa14.19□□□□□ -0.14
SOX9-AS1-213ENST00000533996 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
SOX9-AS1-213ENST00000533996 PROM2Q8N271 834 aa14.18□□□□□ -0.14
SOX9-AS1-213ENST00000533996 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
SOX9-AS1-213ENST00000533996 SPATA31A3Q5VYP0 1347 aa14.17□□□□□ -0.14
SOX9-AS1-213ENST00000533996 KIF1AQ12756 1690 aa14.16□□□□□ -0.14
SOX9-AS1-213ENST00000533996 PSDA5PKW4 1024 aaPredicted RBP14.15□□□□□ -0.14
SOX9-AS1-213ENST00000533996 XPCQ01831 940 aaPredicted RBP14.15□□□□□ -0.14
SOX9-AS1-213ENST00000533996 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
SOX9-AS1-213ENST00000533996 CCDC144AA2RUR9 1427 aa14.15□□□□□ -0.14
SOX9-AS1-213ENST00000533996 PPLO60437 1756 aa14.14□□□□□ -0.15
SOX9-AS1-213ENST00000533996 PLCH1Q4KWH8 1693 aa14.14□□□□□ -0.15
SOX9-AS1-213ENST00000533996 NAIPQ13075 1403 aa14.14□□□□□ -0.15
SOX9-AS1-213ENST00000533996 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
SOX9-AS1-213ENST00000533996 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
SOX9-AS1-213ENST00000533996 HAP1P54257 671 aaPredicted RBP14.12□□□□□ -0.15
SOX9-AS1-213ENST00000533996 PSME1Q06323 249 aa14.12□□□□□ -0.15
SOX9-AS1-213ENST00000533996 CCDC9Q9Y3X0 531 aaKnown RBP14.12□□□□□ -0.15
SOX9-AS1-213ENST00000533996 TECPR2O15040 1411 aa14.11□□□□□ -0.15
SOX9-AS1-213ENST00000533996 FMN2Q9NZ56 1722 aa14.11□□□□□ -0.15
SOX9-AS1-213ENST00000533996 DISP2A7MBM2 1401 aa14.1□□□□□ -0.15
SOX9-AS1-213ENST00000533996 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
SOX9-AS1-213ENST00000533996 EN1Q05925 392 aaPredicted RBP14.09□□□□□ -0.15
SOX9-AS1-213ENST00000533996 KNDC1Q76NI1 1749 aa14.09□□□□□ -0.15
SOX9-AS1-213ENST00000533996 ABCA3Q99758 1704 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 YY1P25490 414 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 SBNO1A3KN83 1393 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 ABCC11Q96J66 1382 aa14.08□□□□□ -0.16
SOX9-AS1-213ENST00000533996 R3HDM1Q15032 1099 aaKnown RBP14.07□□□□□ -0.16
SOX9-AS1-213ENST00000533996 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
SOX9-AS1-213ENST00000533996 NRAPQ86VF7 1730 aa14.07□□□□□ -0.16
SOX9-AS1-213ENST00000533996 RGPD8O14715 1765 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms