RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 PXDNQ92626 1479 aa15.47■□□□□ 0.07
CLP1-206ENST00000533905 ADAMTS2O95450 1211 aa15.47■□□□□ 0.07
CLP1-206ENST00000533905 PIK3C2GO75747 1445 aa15.46■□□□□ 0.07
CLP1-206ENST00000533905 ZNF772Q68DY9 489 aaPredicted RBP15.46■□□□□ 0.07
CLP1-206ENST00000533905 STK26Q9P289 416 aa15.46■□□□□ 0.07
CLP1-206ENST00000533905 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
CLP1-206ENST00000533905 LRRC59Q96AG4 307 aaKnown RBP15.45■□□□□ 0.06
CLP1-206ENST00000533905 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
CLP1-206ENST00000533905 MYOM2P54296 1465 aa15.45■□□□□ 0.06
CLP1-206ENST00000533905 CCDC144AA2RUR9 1427 aa15.44■□□□□ 0.06
CLP1-206ENST00000533905 TECPR2O15040 1411 aa15.44■□□□□ 0.06
CLP1-206ENST00000533905 COL22A1Q8NFW1 1626 aaPredicted RBP15.44■□□□□ 0.06
CLP1-206ENST00000533905 RXRBP28702 533 aa15.44■□□□□ 0.06
CLP1-206ENST00000533905 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
CLP1-206ENST00000533905 KNDC1Q76NI1 1749 aa15.43■□□□□ 0.06
CLP1-206ENST00000533905 LRPPRCP42704 1394 aaKnown RBP15.42■□□□□ 0.06
CLP1-206ENST00000533905 CDK12Q9NYV4 1490 aaPredicted RBP15.41■□□□□ 0.06
CLP1-206ENST00000533905 NRXN1Q9ULB1 1477 aa15.4■□□□□ 0.06
CLP1-206ENST00000533905 FMN2Q9NZ56 1722 aa15.4■□□□□ 0.06
CLP1-206ENST00000533905 QTRT2Q9H974 415 aaKnown RBP15.4■□□□□ 0.06
CLP1-206ENST00000533905 ESCO1Q5FWF5 840 aa15.39■□□□□ 0.05
CLP1-206ENST00000533905 YTHDC2Q9H6S0 1430 aaKnown RBP15.39■□□□□ 0.05
CLP1-206ENST00000533905 ATRNO75882 1429 aa15.38■□□□□ 0.05
CLP1-206ENST00000533905 FOXO3O43524 673 aa15.38■□□□□ 0.05
CLP1-206ENST00000533905 BCL9LQ86UU0 1499 aa15.38■□□□□ 0.05
CLP1-206ENST00000533905 ABCC11Q96J66 1382 aa15.37■□□□□ 0.05
CLP1-206ENST00000533905 CFAP70Q5T0N1 1121 aa15.37■□□□□ 0.05
CLP1-206ENST00000533905 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
CLP1-206ENST00000533905 USP32Q8NFA0 1604 aa15.36■□□□□ 0.05
CLP1-206ENST00000533905 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
CLP1-206ENST00000533905 RGPD8O14715 1765 aaPredicted RBP15.35■□□□□ 0.05
CLP1-206ENST00000533905 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
CLP1-206ENST00000533905 ANKRD30BQ9BXX2 1392 aa15.35■□□□□ 0.05
CLP1-206ENST00000533905 RBM6P78332 1123 aaKnown RBP15.34■□□□□ 0.05
CLP1-206ENST00000533905 SAFB2Q14151 953 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLP1-206ENST00000533905 FNBP4Q8N3X1 1017 aaPredicted RBP15.34■□□□□ 0.05
CLP1-206ENST00000533905 USP21Q9UK80 565 aa15.34■□□□□ 0.05
CLP1-206ENST00000533905 GLI3P10071 1580 aa15.33■□□□□ 0.05
CLP1-206ENST00000533905 MARF1Q9Y4F3 1742 aaKnown RBP15.32■□□□□ 0.04
CLP1-206ENST00000533905 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
CLP1-206ENST00000533905 NPHP3Q7Z494 1330 aa15.32■□□□□ 0.04
CLP1-206ENST00000533905 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
CLP1-206ENST00000533905 C14orf93Q9H972 538 aaKnown RBP15.31■□□□□ 0.04
CLP1-206ENST00000533905 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
CLP1-206ENST00000533905 SPATA31A3Q5VYP0 1347 aa15.3■□□□□ 0.04
CLP1-206ENST00000533905 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
CLP1-206ENST00000533905 SLIT2O94813 1529 aa15.29■□□□□ 0.04
CLP1-206ENST00000533905 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
CLP1-206ENST00000533905 PRR36Q9H6K5 1346 aa15.28■□□□□ 0.04
CLP1-206ENST00000533905 RALGAPBQ86X10 1494 aa15.27■□□□□ 0.04
CLP1-206ENST00000533905 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
CLP1-206ENST00000533905 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.04
CLP1-206ENST00000533905 TNS3Q68CZ2 1445 aa15.26■□□□□ 0.03
CLP1-206ENST00000533905 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
CLP1-206ENST00000533905 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
CLP1-206ENST00000533905 ADGRB2O60241 1585 aa15.26■□□□□ 0.03
CLP1-206ENST00000533905 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
CLP1-206ENST00000533905 PLCH1Q4KWH8 1693 aa15.25■□□□□ 0.03
CLP1-206ENST00000533905 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
CLP1-206ENST00000533905 DLC1Q96QB1 1528 aa15.25■□□□□ 0.03
CLP1-206ENST00000533905 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.25■□□□□ 0.03
CLP1-206ENST00000533905 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
CLP1-206ENST00000533905 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
CLP1-206ENST00000533905 ATAD2Q6PL18 1390 aa15.23■□□□□ 0.03
CLP1-206ENST00000533905 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
CLP1-206ENST00000533905 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
CLP1-206ENST00000533905 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
CLP1-206ENST00000533905 CRYBG1Q9Y4K1 1723 aa15.21■□□□□ 0.03
CLP1-206ENST00000533905 SIRT1Q96EB6 747 aa15.21■□□□□ 0.03
CLP1-206ENST00000533905 KDM2AQ9Y2K7 1162 aa15.21■□□□□ 0.03
CLP1-206ENST00000533905 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
CLP1-206ENST00000533905 ALS2Q96Q42 1657 aa15.2■□□□□ 0.02
CLP1-206ENST00000533905 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
CLP1-206ENST00000533905 UNC5CLQ8IV45 518 aa15.19■□□□□ 0.02
CLP1-206ENST00000533905 TULP4Q9NRJ4 1543 aa15.18■□□□□ 0.02
CLP1-206ENST00000533905 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
CLP1-206ENST00000533905 ATP7BP35670 1465 aa15.18■□□□□ 0.02
CLP1-206ENST00000533905 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
CLP1-206ENST00000533905 SBNO1A3KN83 1393 aa15.17■□□□□ 0.02
CLP1-206ENST00000533905 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
CLP1-206ENST00000533905 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
CLP1-206ENST00000533905 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
CLP1-206ENST00000533905 POGKQ9P215 609 aa15.15■□□□□ 0.02
CLP1-206ENST00000533905 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
CLP1-206ENST00000533905 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
CLP1-206ENST00000533905 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
CLP1-206ENST00000533905 FAM182BQ5T319 152 aa15.13■□□□□ 0.01
CLP1-206ENST00000533905 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
CLP1-206ENST00000533905 PSME1Q06323 249 aa15.12■□□□□ 0.01
CLP1-206ENST00000533905 VPS72Q15906 364 aa15.12■□□□□ 0.01
CLP1-206ENST00000533905 TOPAZ1Q8N9V7 1692 aa15.12■□□□□ 0.01
CLP1-206ENST00000533905 PHRF1Q9P1Y6 1649 aaKnown RBP15.11■□□□□ 0.01
CLP1-206ENST00000533905 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
CLP1-206ENST00000533905 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
CLP1-206ENST00000533905 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
CLP1-206ENST00000533905 FAM98CQ17RN3 349 aaKnown RBP15.09■□□□□ 0.01
CLP1-206ENST00000533905 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
CLP1-206ENST00000533905 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
CLP1-206ENST00000533905 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
CLP1-206ENST00000533905 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms