RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
ATP2C1-224ENST00000533801 RPGRIP1LQ68CZ1 1315 aa20.73■□□□□ 0.91
ATP2C1-224ENST00000533801 COG6Q9Y2V7 657 aa20.73■□□□□ 0.91
ATP2C1-224ENST00000533801 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
ATP2C1-224ENST00000533801 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
ATP2C1-224ENST00000533801 TXNDC2Q86VQ3 553 aa20.72■□□□□ 0.91
ATP2C1-224ENST00000533801 LAMC1P11047 1609 aa20.72■□□□□ 0.91
ATP2C1-224ENST00000533801 CDK19Q9BWU1 502 aa20.72■□□□□ 0.91
ATP2C1-224ENST00000533801 KDM5AP29375 1690 aaKnown RBP20.71■□□□□ 0.91
ATP2C1-224ENST00000533801 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
ATP2C1-224ENST00000533801 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
ATP2C1-224ENST00000533801 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
ATP2C1-224ENST00000533801 PIK3C2GO75747 1445 aa20.7■□□□□ 0.91
ATP2C1-224ENST00000533801 MYOM2P54296 1465 aa20.7■□□□□ 0.9
ATP2C1-224ENST00000533801 NCKAP5LQ9HCH0 1330 aa20.7■□□□□ 0.9
ATP2C1-224ENST00000533801 E9PSI1 815 aa20.69■□□□□ 0.9
ATP2C1-224ENST00000533801 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
ATP2C1-224ENST00000533801 PDE4AP27815 886 aa20.68■□□□□ 0.9
ATP2C1-224ENST00000533801 SYNMO15061 1565 aa20.68■□□□□ 0.9
ATP2C1-224ENST00000533801 HDGFL2Q7Z4V5 671 aaPredicted RBP20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 TERF2IPQ9NYB0 399 aa20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 ZBTB47Q9UFB7 747 aaPredicted RBP20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 CEBPAP49715 358 aaPredicted RBP20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 NEO1Q92859 1461 aa20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 MAPK8IP3Q9UPT6 1336 aa20.67■□□□□ 0.9
ATP2C1-224ENST00000533801 ZMYM4Q5VZL5 1548 aa20.65■□□□□ 0.9
ATP2C1-224ENST00000533801 ADGRB3O60242 1522 aa20.65■□□□□ 0.9
ATP2C1-224ENST00000533801 HMOX1P09601 288 aa20.65■□□□□ 0.9
ATP2C1-224ENST00000533801 MYT1Q01538 1121 aa20.64■□□□□ 0.9
ATP2C1-224ENST00000533801 A0A1W2PP64 1363 aa20.62■□□□□ 0.89
ATP2C1-224ENST00000533801 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
ATP2C1-224ENST00000533801 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
ATP2C1-224ENST00000533801 DIP2CQ9Y2E4 1556 aa20.62■□□□□ 0.89
ATP2C1-224ENST00000533801 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
ATP2C1-224ENST00000533801 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
ATP2C1-224ENST00000533801 CFAP74Q9C0B2 1584 aa20.6■□□□□ 0.89
ATP2C1-224ENST00000533801 FYB1O15117 783 aa20.6■□□□□ 0.89
ATP2C1-224ENST00000533801 ELL2O00472 640 aaPredicted RBP20.6■□□□□ 0.89
ATP2C1-224ENST00000533801 ZNF521Q96K83 1311 aa20.6■□□□□ 0.89
ATP2C1-224ENST00000533801 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
ATP2C1-224ENST00000533801 MYOM1P52179 1685 aa20.58■□□□□ 0.88
ATP2C1-224ENST00000533801 LMTK2Q8IWU2 1503 aa20.58■□□□□ 0.88
ATP2C1-224ENST00000533801 NEFMP07197 916 aa20.58■□□□□ 0.88
ATP2C1-224ENST00000533801 CAMSAP1Q5T5Y3 1602 aa20.57■□□□□ 0.88
ATP2C1-224ENST00000533801 THUMPD2Q9BTF0 503 aaKnown RBP20.57■□□□□ 0.88
ATP2C1-224ENST00000533801 SIGLEC1Q9BZZ2 1709 aa20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 IPO9Q96P70 1041 aaKnown RBP20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 ANKRD36BQ8N2N9 1353 aa20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 NPC1L1Q9UHC9 1359 aa20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 RIPK4P57078 832 aa20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
ATP2C1-224ENST00000533801 NME9Q86XW9 330 aa20.55■□□□□ 0.88
ATP2C1-224ENST00000533801 QRICH2Q9H0J4 1663 aa20.55■□□□□ 0.88
ATP2C1-224ENST00000533801 YTHDC2Q9H6S0 1430 aaKnown RBP20.55■□□□□ 0.88
ATP2C1-224ENST00000533801 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
ATP2C1-224ENST00000533801 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
ATP2C1-224ENST00000533801 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
ATP2C1-224ENST00000533801 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
ATP2C1-224ENST00000533801 POLR3AO14802 1390 aaPredicted RBP20.54■□□□□ 0.88
ATP2C1-224ENST00000533801 SBNO2Q9Y2G9 1366 aa20.54■□□□□ 0.88
ATP2C1-224ENST00000533801 GLI2P10070 1586 aa20.54■□□□□ 0.88
ATP2C1-224ENST00000533801 EXOSC9Q06265 439 aaKnown RBP20.53■□□□□ 0.88
ATP2C1-224ENST00000533801 ADGRB1O14514 1584 aa20.53■□□□□ 0.88
ATP2C1-224ENST00000533801 NRXN1Q9ULB1 1477 aa20.52■□□□□ 0.88
ATP2C1-224ENST00000533801 IGHDP01880 384 aa20.51■□□□□ 0.87
ATP2C1-224ENST00000533801 CENPQQ7L2Z9 268 aaPredicted RBP20.51■□□□□ 0.87
ATP2C1-224ENST00000533801 BACH2Q9BYV9 841 aa20.51■□□□□ 0.87
ATP2C1-224ENST00000533801 PRKAR2BP31323 418 aa20.51■□□□□ 0.87
ATP2C1-224ENST00000533801 RLBP1P12271 317 aa20.5■□□□□ 0.87
ATP2C1-224ENST00000533801 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
ATP2C1-224ENST00000533801 PPLO60437 1756 aa20.5■□□□□ 0.87
ATP2C1-224ENST00000533801 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
ATP2C1-224ENST00000533801 TULP4Q9NRJ4 1543 aa20.5■□□□□ 0.87
ATP2C1-224ENST00000533801 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
ATP2C1-224ENST00000533801 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 RIMS2Q9UQ26 1411 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 ITPRIPQ8IWB1 547 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 ATAD2Q6PL18 1390 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 C14orf37Q86TY3 774 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 RBM33Q96EV2 1170 aaKnown RBP20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
ATP2C1-224ENST00000533801 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
ATP2C1-224ENST00000533801 PMFBP1Q8TBY8 1022 aa20.47■□□□□ 0.87
ATP2C1-224ENST00000533801 MYO5BQ9ULV0 1848 aa20.47■□□□□ 0.87
ATP2C1-224ENST00000533801 PIK3C2BO00750 1634 aa20.47■□□□□ 0.87
ATP2C1-224ENST00000533801 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
ATP2C1-224ENST00000533801 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
ATP2C1-224ENST00000533801 ZMYM3Q14202 1370 aa20.45■□□□□ 0.86
ATP2C1-224ENST00000533801 NUTM2GQ5VZR2 741 aa20.45■□□□□ 0.86
ATP2C1-224ENST00000533801 TRMT2AQ8IZ69 625 aaKnown RBP20.45■□□□□ 0.86
ATP2C1-224ENST00000533801 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
ATP2C1-224ENST00000533801 METP08581 1390 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms