RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 MYOM2P54296 1465 aa19.09■□□□□ 0.65
SVIP-205ENST00000533774 KCNA4P22459 653 aa19.08■□□□□ 0.64
SVIP-205ENST00000533774 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.64
SVIP-205ENST00000533774 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
SVIP-205ENST00000533774 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.06■□□□□ 0.64
SVIP-205ENST00000533774 KIF1BO60333 1816 aa19.06■□□□□ 0.64
SVIP-205ENST00000533774 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
SVIP-205ENST00000533774 CCDC125Q86Z20 511 aa19.05■□□□□ 0.64
SVIP-205ENST00000533774 GLI3P10071 1580 aa19.05■□□□□ 0.64
SVIP-205ENST00000533774 PXDNQ92626 1479 aa19.03■□□□□ 0.64
SVIP-205ENST00000533774 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.64
SVIP-205ENST00000533774 LRP5O75197 1615 aa19.02■□□□□ 0.64
SVIP-205ENST00000533774 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
SVIP-205ENST00000533774 RALGAPBQ86X10 1494 aa18.99■□□□□ 0.63
SVIP-205ENST00000533774 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
SVIP-205ENST00000533774 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
SVIP-205ENST00000533774 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
SVIP-205ENST00000533774 SLIT2O94813 1529 aa18.96■□□□□ 0.63
SVIP-205ENST00000533774 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
SVIP-205ENST00000533774 PPLO60437 1756 aa18.95■□□□□ 0.62
SVIP-205ENST00000533774 ESCO1Q5FWF5 840 aa18.94■□□□□ 0.62
SVIP-205ENST00000533774 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
SVIP-205ENST00000533774 HFM1A2PYH4 1435 aa18.93■□□□□ 0.62
SVIP-205ENST00000533774 FOXO3O43524 673 aa18.93■□□□□ 0.62
SVIP-205ENST00000533774 ITGAEP38570 1179 aa18.92■□□□□ 0.62
SVIP-205ENST00000533774 UNC5CLQ8IV45 518 aa18.92■□□□□ 0.62
SVIP-205ENST00000533774 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
SVIP-205ENST00000533774 USP32Q8NFA0 1604 aa18.91■□□□□ 0.62
SVIP-205ENST00000533774 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
SVIP-205ENST00000533774 PLCH1Q4KWH8 1693 aa18.9■□□□□ 0.62
SVIP-205ENST00000533774 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
SVIP-205ENST00000533774 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
SVIP-205ENST00000533774 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
SVIP-205ENST00000533774 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
SVIP-205ENST00000533774 NAIPQ13075 1403 aa18.87■□□□□ 0.61
SVIP-205ENST00000533774 ABCA3Q99758 1704 aa18.87■□□□□ 0.61
SVIP-205ENST00000533774 FMN2Q9NZ56 1722 aa18.87■□□□□ 0.61
SVIP-205ENST00000533774 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
SVIP-205ENST00000533774 SPATA31A3Q5VYP0 1347 aa18.86■□□□□ 0.61
SVIP-205ENST00000533774 HRCP23327 699 aa18.85■□□□□ 0.61
SVIP-205ENST00000533774 WAPLQ7Z5K2 1190 aa18.84■□□□□ 0.61
SVIP-205ENST00000533774 KIF1AQ12756 1690 aa18.83■□□□□ 0.61
SVIP-205ENST00000533774 ONECUT3O60422 494 aaPredicted RBP18.83■□□□□ 0.6
SVIP-205ENST00000533774 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
SVIP-205ENST00000533774 VPS72Q15906 364 aa18.82■□□□□ 0.6
SVIP-205ENST00000533774 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
SVIP-205ENST00000533774 PLEKHH1Q9ULM0 1364 aa18.81■□□□□ 0.6
SVIP-205ENST00000533774 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
SVIP-205ENST00000533774 CABLES1Q8TDN4 633 aa18.81■□□□□ 0.6
SVIP-205ENST00000533774 KNDC1Q76NI1 1749 aa18.8■□□□□ 0.6
SVIP-205ENST00000533774 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
SVIP-205ENST00000533774 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
SVIP-205ENST00000533774 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
SVIP-205ENST00000533774 TECPR2O15040 1411 aa18.79■□□□□ 0.6
SVIP-205ENST00000533774 RGPD1P0DJD0 1748 aa18.78■□□□□ 0.6
SVIP-205ENST00000533774 KRT28Q7Z3Y7 464 aa18.78■□□□□ 0.6
SVIP-205ENST00000533774 STK26Q9P289 416 aa18.78■□□□□ 0.6
SVIP-205ENST00000533774 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.6
SVIP-205ENST00000533774 CCDC144AA2RUR9 1427 aa18.77■□□□□ 0.6
SVIP-205ENST00000533774 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
SVIP-205ENST00000533774 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
SVIP-205ENST00000533774 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
SVIP-205ENST00000533774 BAG6P46379 1132 aa18.75■□□□□ 0.59
SVIP-205ENST00000533774 EN1Q05925 392 aaPredicted RBP18.75■□□□□ 0.59
SVIP-205ENST00000533774 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
SVIP-205ENST00000533774 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
SVIP-205ENST00000533774 FAM182BQ5T319 152 aa18.73■□□□□ 0.59
SVIP-205ENST00000533774 TMEM132EQ6IEE7 984 aa18.73■□□□□ 0.59
SVIP-205ENST00000533774 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
SVIP-205ENST00000533774 ABCC11Q96J66 1382 aa18.72■□□□□ 0.59
SVIP-205ENST00000533774 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
SVIP-205ENST00000533774 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
SVIP-205ENST00000533774 FAM98CQ17RN3 349 aaKnown RBP18.71■□□□□ 0.59
SVIP-205ENST00000533774 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
SVIP-205ENST00000533774 RRBP1Q9P2E9 1410 aaKnown RBP18.71■□□□□ 0.59
SVIP-205ENST00000533774 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
SVIP-205ENST00000533774 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
SVIP-205ENST00000533774 A0A0G2JS52 829 aa18.68■□□□□ 0.58
SVIP-205ENST00000533774 MYT1Q01538 1121 aa18.68■□□□□ 0.58
SVIP-205ENST00000533774 NRXN1Q9ULB1 1477 aa18.68■□□□□ 0.58
SVIP-205ENST00000533774 THSD7AQ9UPZ6 1657 aa18.68■□□□□ 0.58
SVIP-205ENST00000533774 SBNO1A3KN83 1393 aa18.68■□□□□ 0.58
SVIP-205ENST00000533774 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
SVIP-205ENST00000533774 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
SVIP-205ENST00000533774 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
SVIP-205ENST00000533774 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
SVIP-205ENST00000533774 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
SVIP-205ENST00000533774 LMOD2Q6P5Q4 547 aa18.66■□□□□ 0.58
SVIP-205ENST00000533774 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
SVIP-205ENST00000533774 PSME1Q06323 249 aa18.65■□□□□ 0.58
SVIP-205ENST00000533774 EZH2Q15910 746 aaKnown RBP18.65■□□□□ 0.58
SVIP-205ENST00000533774 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
SVIP-205ENST00000533774 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
SVIP-205ENST00000533774 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
SVIP-205ENST00000533774 PIK3C2GO75747 1445 aa18.64■□□□□ 0.57
SVIP-205ENST00000533774 ARHGEF10O15013 1369 aa18.63■□□□□ 0.57
SVIP-205ENST00000533774 RREB1Q92766 1687 aa18.62■□□□□ 0.57
SVIP-205ENST00000533774 NUP188Q5SRE5 1749 aa18.61■□□□□ 0.57
SVIP-205ENST00000533774 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
SVIP-205ENST00000533774 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms