RNA–Protein interactions for RNA: ENST00000533341.2

GRAMD1B-209, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-209ENST00000533341 ESCO1Q5FWF5 840 aa29.05■■■□□ 2.24
GRAMD1B-209ENST00000533341 ABCC11Q96J66 1382 aa29.03■■■□□ 2.24
GRAMD1B-209ENST00000533341 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
GRAMD1B-209ENST00000533341 TECPR2O15040 1411 aa29.03■■■□□ 2.24
GRAMD1B-209ENST00000533341 C8orf37Q96NL8 207 aa29.02■■■□□ 2.24
GRAMD1B-209ENST00000533341 KNDC1Q76NI1 1749 aa29.02■■■□□ 2.24
GRAMD1B-209ENST00000533341 AFF2P51816 1311 aa29.01■■■□□ 2.23
GRAMD1B-209ENST00000533341 SOS2Q07890 1332 aaPredicted RBP29.01■■■□□ 2.23
GRAMD1B-209ENST00000533341 NUTM2FA1L443 756 aa29.01■■■□□ 2.23
GRAMD1B-209ENST00000533341 YTHDC2Q9H6S0 1430 aaKnown RBP29.01■■■□□ 2.23
GRAMD1B-209ENST00000533341 C14orf93Q9H972 538 aaKnown RBP29■■■□□ 2.23
GRAMD1B-209ENST00000533341 LAMC1P11047 1609 aa29■■■□□ 2.23
GRAMD1B-209ENST00000533341 RXRBP28702 533 aa28.99■■■□□ 2.23
GRAMD1B-209ENST00000533341 PLEKHH1Q9ULM0 1364 aa28.99■■■□□ 2.23
GRAMD1B-209ENST00000533341 ADAMTS2O95450 1211 aa28.98■■■□□ 2.23
GRAMD1B-209ENST00000533341 CFAP70Q5T0N1 1121 aa28.98■■■□□ 2.23
GRAMD1B-209ENST00000533341 DHX57Q6P158 1386 aaKnown RBP28.98■■■□□ 2.23
GRAMD1B-209ENST00000533341 NPHP3Q7Z494 1330 aa28.97■■■□□ 2.23
GRAMD1B-209ENST00000533341 MYOM2P54296 1465 aa28.97■■■□□ 2.23
GRAMD1B-209ENST00000533341 FOXO3O43524 673 aa28.94■■■□□ 2.22
GRAMD1B-209ENST00000533341 NGLY1Q96IV0 654 aa28.94■■■□□ 2.22
GRAMD1B-209ENST00000533341 NRXN1Q9ULB1 1477 aa28.93■■■□□ 2.22
GRAMD1B-209ENST00000533341 XPCQ01831 940 aaPredicted RBP28.92■■■□□ 2.22
GRAMD1B-209ENST00000533341 SIRT1Q96EB6 747 aa28.92■■■□□ 2.22
GRAMD1B-209ENST00000533341 KDM2AQ9Y2K7 1162 aa28.91■■■□□ 2.22
GRAMD1B-209ENST00000533341 QTRT2Q9H974 415 aaKnown RBP28.9■■■□□ 2.22
GRAMD1B-209ENST00000533341 HRCP23327 699 aa28.89■■■□□ 2.22
GRAMD1B-209ENST00000533341 SAFB2Q14151 953 aaKnown RBP eCLIP28.89■■■□□ 2.22
GRAMD1B-209ENST00000533341 FMN2Q9NZ56 1722 aa28.89■■■□□ 2.21
GRAMD1B-209ENST00000533341 POGKQ9P215 609 aa28.88■■■□□ 2.21
GRAMD1B-209ENST00000533341 DCAF11Q8TEB1 546 aa28.87■■■□□ 2.21
GRAMD1B-209ENST00000533341 PRAM1Q96QH2 718 aa28.87■■■□□ 2.21
GRAMD1B-209ENST00000533341 PXDNQ92626 1479 aa28.85■■■□□ 2.21
GRAMD1B-209ENST00000533341 COL22A1Q8NFW1 1626 aaPredicted RBP28.83■■■□□ 2.21
GRAMD1B-209ENST00000533341 RBM6P78332 1123 aaKnown RBP28.83■■■□□ 2.21
GRAMD1B-209ENST00000533341 USP21Q9UK80 565 aa28.83■■■□□ 2.21
GRAMD1B-209ENST00000533341 KIF1AQ12756 1690 aa28.83■■■□□ 2.21
GRAMD1B-209ENST00000533341 RGPD8O14715 1765 aaPredicted RBP28.81■■■□□ 2.2
GRAMD1B-209ENST00000533341 CDK12Q9NYV4 1490 aaPredicted RBP28.81■■■□□ 2.2
GRAMD1B-209ENST00000533341 TRAK1Q9UPV9 953 aa28.81■■■□□ 2.2
GRAMD1B-209ENST00000533341 KRT28Q7Z3Y7 464 aa28.79■■■□□ 2.2
GRAMD1B-209ENST00000533341 PHF8Q9UPP1 1060 aa28.79■■■□□ 2.2
GRAMD1B-209ENST00000533341 STAC3Q96MF2 364 aa28.78■■■□□ 2.2
GRAMD1B-209ENST00000533341 DLC1Q96QB1 1528 aa28.78■■■□□ 2.2
GRAMD1B-209ENST00000533341 UPF1Q92900 1129 aaKnown RBP eCLIP28.76■■■□□ 2.19
GRAMD1B-209ENST00000533341 TRPC5Q9UL62 973 aaPredicted RBP28.76■■■□□ 2.19
GRAMD1B-209ENST00000533341 PSME1Q06323 249 aa28.75■■■□□ 2.19
GRAMD1B-209ENST00000533341 ADGRB1O14514 1584 aa28.75■■■□□ 2.19
GRAMD1B-209ENST00000533341 SPATA31A3Q5VYP0 1347 aa28.74■■■□□ 2.19
GRAMD1B-209ENST00000533341 FNBP4Q8N3X1 1017 aaPredicted RBP28.74■■■□□ 2.19
GRAMD1B-209ENST00000533341 MARF1Q9Y4F3 1742 aaKnown RBP28.73■■■□□ 2.19
GRAMD1B-209ENST00000533341 RGS12O14924 1447 aa28.72■■■□□ 2.19
GRAMD1B-209ENST00000533341 HIRIP3Q9BW71 556 aaPredicted RBP28.72■■■□□ 2.19
GRAMD1B-209ENST00000533341 MINK1Q8N4C8 1332 aaPredicted RBP28.71■■■□□ 2.19
GRAMD1B-209ENST00000533341 HAP1P54257 671 aaPredicted RBP28.71■■■□□ 2.19
GRAMD1B-209ENST00000533341 PLEKHG5O94827 1062 aa28.7■■■□□ 2.18
GRAMD1B-209ENST00000533341 LMOD2Q6P5Q4 547 aa28.7■■■□□ 2.18
GRAMD1B-209ENST00000533341 PMFBP1Q8TBY8 1022 aa28.7■■■□□ 2.18
GRAMD1B-209ENST00000533341 ANKARQ7Z5J8 1434 aa28.67■■■□□ 2.18
GRAMD1B-209ENST00000533341 TNS3Q68CZ2 1445 aa28.66■■■□□ 2.18
GRAMD1B-209ENST00000533341 ADGRB2O60241 1585 aa28.66■■■□□ 2.18
GRAMD1B-209ENST00000533341 EIF3AQ14152 1382 aaKnown RBP28.65■■■□□ 2.18
GRAMD1B-209ENST00000533341 ATRNO75882 1429 aa28.64■■■□□ 2.18
GRAMD1B-209ENST00000533341 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
GRAMD1B-209ENST00000533341 SBNO1A3KN83 1393 aa28.62■■■□□ 2.17
GRAMD1B-209ENST00000533341 WASLO00401 505 aaPredicted RBP28.62■■■□□ 2.17
GRAMD1B-209ENST00000533341 BCL9LQ86UU0 1499 aa28.61■■■□□ 2.17
GRAMD1B-209ENST00000533341 CABLES1Q8TDN4 633 aa28.61■■■□□ 2.17
GRAMD1B-209ENST00000533341 ARHGEF10O15013 1369 aa28.6■■■□□ 2.17
GRAMD1B-209ENST00000533341 GPRASP1Q5JY77 1395 aa28.59■■■□□ 2.17
GRAMD1B-209ENST00000533341 ARHGEF28Q8N1W1 1705 aaKnown RBP28.58■■■□□ 2.17
GRAMD1B-209ENST00000533341 TULP4Q9NRJ4 1543 aa28.58■■■□□ 2.17
GRAMD1B-209ENST00000533341 UNC5CLQ8IV45 518 aa28.57■■■□□ 2.16
GRAMD1B-209ENST00000533341 GJD4Q96KN9 370 aaPredicted RBP28.57■■■□□ 2.16
GRAMD1B-209ENST00000533341 ATAD2Q6PL18 1390 aa28.57■■■□□ 2.16
GRAMD1B-209ENST00000533341 NGDNQ8NEJ9 315 aaKnown RBP28.56■■■□□ 2.16
GRAMD1B-209ENST00000533341 PRR36Q9H6K5 1346 aa28.56■■■□□ 2.16
GRAMD1B-209ENST00000533341 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.54■■■□□ 2.16
GRAMD1B-209ENST00000533341 SLIT2O94813 1529 aa28.53■■■□□ 2.16
GRAMD1B-209ENST00000533341 KIAA1210Q9ULL0 1709 aa28.52■■■□□ 2.16
GRAMD1B-209ENST00000533341 PAK3O75914 559 aaPredicted RBP28.51■■■□□ 2.15
GRAMD1B-209ENST00000533341 CCDC9Q9Y3X0 531 aaKnown RBP28.5■■■□□ 2.15
GRAMD1B-209ENST00000533341 ITSN1Q15811 1721 aa28.49■■■□□ 2.15
GRAMD1B-209ENST00000533341 ABCA3Q99758 1704 aa28.49■■■□□ 2.15
GRAMD1B-209ENST00000533341 NUDT16Q96DE0 195 aaKnown RBP28.49■■■□□ 2.15
GRAMD1B-209ENST00000533341 TRPM3Q9HCF6 1732 aaPredicted RBP28.49■■■□□ 2.15
GRAMD1B-209ENST00000533341 CDK19Q9BWU1 502 aa28.48■■■□□ 2.15
GRAMD1B-209ENST00000533341 NBPF1Q3BBV0 1214 aa28.47■■■□□ 2.15
GRAMD1B-209ENST00000533341 PLCH1Q4KWH8 1693 aa28.47■■■□□ 2.15
GRAMD1B-209ENST00000533341 RALGAPBQ86X10 1494 aa28.46■■■□□ 2.15
GRAMD1B-209ENST00000533341 NWD2Q9ULI1 1742 aa28.44■■■□□ 2.14
GRAMD1B-209ENST00000533341 GLI3P10071 1580 aa28.44■■■□□ 2.14
GRAMD1B-209ENST00000533341 ALS2Q96Q42 1657 aa28.44■■■□□ 2.14
GRAMD1B-209ENST00000533341 ATP7BP35670 1465 aa28.43■■■□□ 2.14
GRAMD1B-209ENST00000533341 FAM83GA6ND36 823 aa28.43■■■□□ 2.14
GRAMD1B-209ENST00000533341 VPS72Q15906 364 aa28.43■■■□□ 2.14
GRAMD1B-209ENST00000533341 NEUROD1Q13562 356 aa28.39■■■□□ 2.14
GRAMD1B-209ENST00000533341 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
GRAMD1B-209ENST00000533341 SIN3AQ96ST3 1273 aa28.39■■■□□ 2.14
GRAMD1B-209ENST00000533341 CCDC61Q9Y6R9 512 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms