RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-210ENST00000533039 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
SOX9-AS1-210ENST00000533039 NUTM2AQ8IVF1 878 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-210ENST00000533039 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
SOX9-AS1-210ENST00000533039 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
SOX9-AS1-210ENST00000533039 YTHDC2Q9H6S0 1430 aaKnown RBP12.87□□□□□ -0.35
SOX9-AS1-210ENST00000533039 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
SOX9-AS1-210ENST00000533039 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
SOX9-AS1-210ENST00000533039 HRCP23327 699 aa12.86□□□□□ -0.35
SOX9-AS1-210ENST00000533039 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
SOX9-AS1-210ENST00000533039 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
SOX9-AS1-210ENST00000533039 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
SOX9-AS1-210ENST00000533039 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
SOX9-AS1-210ENST00000533039 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
SOX9-AS1-210ENST00000533039 ORAI2Q96SN7 254 aa12.85□□□□□ -0.35
SOX9-AS1-210ENST00000533039 KIF1AQ12756 1690 aa12.84□□□□□ -0.35
SOX9-AS1-210ENST00000533039 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
SOX9-AS1-210ENST00000533039 WAPLQ7Z5K2 1190 aa12.84□□□□□ -0.35
SOX9-AS1-210ENST00000533039 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
SOX9-AS1-210ENST00000533039 PNPLA6Q8IY17 1366 aa12.83□□□□□ -0.36
SOX9-AS1-210ENST00000533039 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.36
SOX9-AS1-210ENST00000533039 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
SOX9-AS1-210ENST00000533039 COL22A1Q8NFW1 1626 aaPredicted RBP12.82□□□□□ -0.36
SOX9-AS1-210ENST00000533039 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
SOX9-AS1-210ENST00000533039 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
SOX9-AS1-210ENST00000533039 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
SOX9-AS1-210ENST00000533039 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
SOX9-AS1-210ENST00000533039 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
SOX9-AS1-210ENST00000533039 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
SOX9-AS1-210ENST00000533039 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
SOX9-AS1-210ENST00000533039 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
SOX9-AS1-210ENST00000533039 AFF2P51816 1311 aa12.8□□□□□ -0.36
SOX9-AS1-210ENST00000533039 DLC1Q96QB1 1528 aa12.79□□□□□ -0.36
SOX9-AS1-210ENST00000533039 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
SOX9-AS1-210ENST00000533039 PXDNQ92626 1479 aa12.78□□□□□ -0.36
SOX9-AS1-210ENST00000533039 FOXO3O43524 673 aa12.78□□□□□ -0.36
SOX9-AS1-210ENST00000533039 RXRBP28702 533 aa12.78□□□□□ -0.36
SOX9-AS1-210ENST00000533039 POGKQ9P215 609 aa12.78□□□□□ -0.36
SOX9-AS1-210ENST00000533039 ADAMTS2O95450 1211 aa12.77□□□□□ -0.37
SOX9-AS1-210ENST00000533039 NGLY1Q96IV0 654 aa12.77□□□□□ -0.37
SOX9-AS1-210ENST00000533039 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
SOX9-AS1-210ENST00000533039 ADGRB1O14514 1584 aa12.77□□□□□ -0.37
SOX9-AS1-210ENST00000533039 ADGRB2O60241 1585 aa12.77□□□□□ -0.37
SOX9-AS1-210ENST00000533039 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
SOX9-AS1-210ENST00000533039 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
SOX9-AS1-210ENST00000533039 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
SOX9-AS1-210ENST00000533039 ARHGEF28Q8N1W1 1705 aaKnown RBP12.75□□□□□ -0.37
SOX9-AS1-210ENST00000533039 KIAA1210Q9ULL0 1709 aa12.75□□□□□ -0.37
SOX9-AS1-210ENST00000533039 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
SOX9-AS1-210ENST00000533039 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
SOX9-AS1-210ENST00000533039 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
SOX9-AS1-210ENST00000533039 USP32Q8NFA0 1604 aa12.73□□□□□ -0.37
SOX9-AS1-210ENST00000533039 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
SOX9-AS1-210ENST00000533039 ANKARQ7Z5J8 1434 aa12.72□□□□□ -0.37
SOX9-AS1-210ENST00000533039 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
SOX9-AS1-210ENST00000533039 RBM6P78332 1123 aaKnown RBP12.72□□□□□ -0.37
SOX9-AS1-210ENST00000533039 PSME1Q06323 249 aa12.72□□□□□ -0.37
SOX9-AS1-210ENST00000533039 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
SOX9-AS1-210ENST00000533039 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
SOX9-AS1-210ENST00000533039 USP21Q9UK80 565 aa12.71□□□□□ -0.37
SOX9-AS1-210ENST00000533039 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
SOX9-AS1-210ENST00000533039 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
SOX9-AS1-210ENST00000533039 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
SOX9-AS1-210ENST00000533039 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
SOX9-AS1-210ENST00000533039 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
SOX9-AS1-210ENST00000533039 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
SOX9-AS1-210ENST00000533039 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
SOX9-AS1-210ENST00000533039 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
SOX9-AS1-210ENST00000533039 TRPC5Q9UL62 973 aaPredicted RBP12.69□□□□□ -0.38
SOX9-AS1-210ENST00000533039 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
SOX9-AS1-210ENST00000533039 RGS12O14924 1447 aa12.68□□□□□ -0.38
SOX9-AS1-210ENST00000533039 SBNO1A3KN83 1393 aa12.68□□□□□ -0.38
SOX9-AS1-210ENST00000533039 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
SOX9-AS1-210ENST00000533039 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
SOX9-AS1-210ENST00000533039 NWD2Q9ULI1 1742 aa12.67□□□□□ -0.38
SOX9-AS1-210ENST00000533039 ARHGEF10O15013 1369 aa12.67□□□□□ -0.38
SOX9-AS1-210ENST00000533039 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
SOX9-AS1-210ENST00000533039 ATRNO75882 1429 aa12.66□□□□□ -0.38
SOX9-AS1-210ENST00000533039 WASLO00401 505 aaPredicted RBP12.66□□□□□ -0.38
SOX9-AS1-210ENST00000533039 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
SOX9-AS1-210ENST00000533039 ALS2Q96Q42 1657 aa12.66□□□□□ -0.38
SOX9-AS1-210ENST00000533039 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
SOX9-AS1-210ENST00000533039 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
SOX9-AS1-210ENST00000533039 NGDNQ8NEJ9 315 aaKnown RBP12.64□□□□□ -0.39
SOX9-AS1-210ENST00000533039 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
SOX9-AS1-210ENST00000533039 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
SOX9-AS1-210ENST00000533039 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
SOX9-AS1-210ENST00000533039 TOPAZ1Q8N9V7 1692 aa12.63□□□□□ -0.39
SOX9-AS1-210ENST00000533039 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 SLIT2O94813 1529 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 ATP7BP35670 1465 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 UNC5CLQ8IV45 518 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
SOX9-AS1-210ENST00000533039 BRWD3Q6RI45 1802 aa12.61□□□□□ -0.39
SOX9-AS1-210ENST00000533039 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
SOX9-AS1-210ENST00000533039 GJD4Q96KN9 370 aaPredicted RBP12.61□□□□□ -0.39
SOX9-AS1-210ENST00000533039 CRYBG1Q9Y4K1 1723 aa12.61□□□□□ -0.39
SOX9-AS1-210ENST00000533039 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms