RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 BAG6P46379 1132 aa15.23■□□□□ 0.03
CHMP4A-206ENST00000533011 COL22A1Q8NFW1 1626 aaPredicted RBP15.22■□□□□ 0.03
CHMP4A-206ENST00000533011 YY1P25490 414 aa15.22■□□□□ 0.03
CHMP4A-206ENST00000533011 ORAI2Q96SN7 254 aa15.22■□□□□ 0.03
CHMP4A-206ENST00000533011 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.03
CHMP4A-206ENST00000533011 MYOM2P54296 1465 aa15.2■□□□□ 0.02
CHMP4A-206ENST00000533011 ONECUT3O60422 494 aaPredicted RBP15.2■□□□□ 0.02
CHMP4A-206ENST00000533011 METP08581 1390 aa15.2■□□□□ 0.02
CHMP4A-206ENST00000533011 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
CHMP4A-206ENST00000533011 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
CHMP4A-206ENST00000533011 LRPPRCP42704 1394 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-206ENST00000533011 PSDA5PKW4 1024 aaPredicted RBP15.18■□□□□ 0.02
CHMP4A-206ENST00000533011 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
CHMP4A-206ENST00000533011 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
CHMP4A-206ENST00000533011 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
CHMP4A-206ENST00000533011 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
CHMP4A-206ENST00000533011 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
CHMP4A-206ENST00000533011 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.16■□□□□ 0.02
CHMP4A-206ENST00000533011 VPS72Q15906 364 aa15.15■□□□□ 0.02
CHMP4A-206ENST00000533011 SLIT2O94813 1529 aa15.15■□□□□ 0.02
CHMP4A-206ENST00000533011 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
CHMP4A-206ENST00000533011 NRXN3Q9Y4C0 1643 aa15.14■□□□□ 0.01
CHMP4A-206ENST00000533011 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
CHMP4A-206ENST00000533011 NALCNQ8IZF0 1738 aa15.13■□□□□ 0.01
CHMP4A-206ENST00000533011 MARF1Q9Y4F3 1742 aaKnown RBP15.13■□□□□ 0.01
CHMP4A-206ENST00000533011 GLI3P10071 1580 aa15.12■□□□□ 0.01
CHMP4A-206ENST00000533011 FOXO3O43524 673 aa15.1■□□□□ 0.01
CHMP4A-206ENST00000533011 R3HDM1Q15032 1099 aaKnown RBP15.1■□□□□ 0.01
CHMP4A-206ENST00000533011 CLTCL1P53675 1640 aa15.1■□□□□ 0.01
CHMP4A-206ENST00000533011 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
CHMP4A-206ENST00000533011 RAB3GAP2Q9H2M9 1393 aa15.09■□□□□ 0.01
CHMP4A-206ENST00000533011 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
CHMP4A-206ENST00000533011 PXDNQ92626 1479 aa15.08■□□□□ 0.01
CHMP4A-206ENST00000533011 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
CHMP4A-206ENST00000533011 IFFO2Q5TF58 517 aa15.08■□□□□ 0
CHMP4A-206ENST00000533011 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
CHMP4A-206ENST00000533011 BRWD3Q6RI45 1802 aa15.08■□□□□ 0
CHMP4A-206ENST00000533011 EN1Q05925 392 aaPredicted RBP15.07■□□□□ 0
CHMP4A-206ENST00000533011 KIF1BO60333 1816 aa15.07■□□□□ 0
CHMP4A-206ENST00000533011 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
CHMP4A-206ENST00000533011 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
CHMP4A-206ENST00000533011 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
CHMP4A-206ENST00000533011 DISP2A7MBM2 1401 aa15.05■□□□□ -0
CHMP4A-206ENST00000533011 A0A0G2JS52 829 aa15.03■□□□□ -0
CHMP4A-206ENST00000533011 MYT1Q01538 1121 aa15.03■□□□□ -0
CHMP4A-206ENST00000533011 PSME1Q06323 249 aa15.03■□□□□ -0
CHMP4A-206ENST00000533011 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
CHMP4A-206ENST00000533011 XPCQ01831 940 aaPredicted RBP15.02■□□□□ -0
CHMP4A-206ENST00000533011 CCDC144AA2RUR9 1427 aa15.01□□□□□ -0.01
CHMP4A-206ENST00000533011 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
CHMP4A-206ENST00000533011 NBPF14Q5TI25 921 aa15□□□□□ -0.01
CHMP4A-206ENST00000533011 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
CHMP4A-206ENST00000533011 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
CHMP4A-206ENST00000533011 CDC42BPGQ6DT37 1551 aa14.99□□□□□ -0.01
CHMP4A-206ENST00000533011 RPGRIP1LQ68CZ1 1315 aa14.99□□□□□ -0.01
CHMP4A-206ENST00000533011 CAMKK2Q96RR4 588 aa14.99□□□□□ -0.01
CHMP4A-206ENST00000533011 PPP1R1BQ9UD71 204 aaPredicted RBP14.99□□□□□ -0.01
CHMP4A-206ENST00000533011 NWD2Q9ULI1 1742 aa14.99□□□□□ -0.01
CHMP4A-206ENST00000533011 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
CHMP4A-206ENST00000533011 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
CHMP4A-206ENST00000533011 EZH2Q15910 746 aaKnown RBP14.98□□□□□ -0.01
CHMP4A-206ENST00000533011 FAM98CQ17RN3 349 aaKnown RBP14.98□□□□□ -0.01
CHMP4A-206ENST00000533011 SPON1Q9HCB6 807 aa14.98□□□□□ -0.01
CHMP4A-206ENST00000533011 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
CHMP4A-206ENST00000533011 FAM196AQ6ZSG2 479 aa14.96□□□□□ -0.01
CHMP4A-206ENST00000533011 FAM83GA6ND36 823 aa14.95□□□□□ -0.02
CHMP4A-206ENST00000533011 ARHGEF10O15013 1369 aa14.95□□□□□ -0.02
CHMP4A-206ENST00000533011 SPATA31E1Q6ZUB1 1445 aa14.94□□□□□ -0.02
CHMP4A-206ENST00000533011 PPLO60437 1756 aa14.94□□□□□ -0.02
CHMP4A-206ENST00000533011 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
CHMP4A-206ENST00000533011 SENP3-EIF4A1A0A087X0R7 540 aa14.93□□□□□ -0.02
CHMP4A-206ENST00000533011 KCNQ2O43526 872 aa14.93□□□□□ -0.02
CHMP4A-206ENST00000533011 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
CHMP4A-206ENST00000533011 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
CHMP4A-206ENST00000533011 APBA3O96018 575 aa14.92□□□□□ -0.02
CHMP4A-206ENST00000533011 ZNF784Q8NCA9 323 aaPredicted RBP14.92□□□□□ -0.02
CHMP4A-206ENST00000533011 CABLES1Q8TDN4 633 aa14.92□□□□□ -0.02
CHMP4A-206ENST00000533011 KIF1AQ12756 1690 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 BTG4Q9NY30 223 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 SPATA31A5Q5VU36 1347 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 SPATA31A7Q8IWB4 1347 aa14.91□□□□□ -0.02
CHMP4A-206ENST00000533011 C1QTNF8P60827 252 aa14.9□□□□□ -0.02
CHMP4A-206ENST00000533011 PHF8Q9UPP1 1060 aa14.9□□□□□ -0.02
CHMP4A-206ENST00000533011 PLCH1Q4KWH8 1693 aa14.9□□□□□ -0.02
CHMP4A-206ENST00000533011 IFT172Q9UG01 1749 aa14.89□□□□□ -0.03
CHMP4A-206ENST00000533011 TRIM37O94972 964 aa14.89□□□□□ -0.03
CHMP4A-206ENST00000533011 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
CHMP4A-206ENST00000533011 FAM182BQ5T319 152 aa14.88□□□□□ -0.03
CHMP4A-206ENST00000533011 SIRT1Q96EB6 747 aa14.88□□□□□ -0.03
CHMP4A-206ENST00000533011 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
CHMP4A-206ENST00000533011 TECPR2O15040 1411 aa14.87□□□□□ -0.03
CHMP4A-206ENST00000533011 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
CHMP4A-206ENST00000533011 WAPLQ7Z5K2 1190 aa14.87□□□□□ -0.03
CHMP4A-206ENST00000533011 ADGRF5Q8IZF2 1346 aa14.87□□□□□ -0.03
CHMP4A-206ENST00000533011 TNS1Q9HBL0 1735 aaKnown RBP14.85□□□□□ -0.03
CHMP4A-206ENST00000533011 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
CHMP4A-206ENST00000533011 STK26Q9P289 416 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 935.1 ms