RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TRIM29Q14134 588 aa13.13□□□□□ -0.31
COLCA1-203ENST00000532918 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
COLCA1-203ENST00000532918 PNISRQ8TF01 805 aaKnown RBP13.13□□□□□ -0.31
COLCA1-203ENST00000532918 ARID3AQ99856 593 aa13.13□□□□□ -0.31
COLCA1-203ENST00000532918 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
COLCA1-203ENST00000532918 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
COLCA1-203ENST00000532918 ERC2O15083 957 aa13.12□□□□□ -0.31
COLCA1-203ENST00000532918 HMOX1P09601 288 aa13.12□□□□□ -0.31
COLCA1-203ENST00000532918 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
COLCA1-203ENST00000532918 ATP6V1DQ9Y5K8 247 aa13.11□□□□□ -0.31
COLCA1-203ENST00000532918 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
COLCA1-203ENST00000532918 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
COLCA1-203ENST00000532918 PRKRIP1Q9H875 184 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-203ENST00000532918 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
COLCA1-203ENST00000532918 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
COLCA1-203ENST00000532918 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
COLCA1-203ENST00000532918 CABP4P57796 275 aa13.11□□□□□ -0.31
COLCA1-203ENST00000532918 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-203ENST00000532918 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-203ENST00000532918 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
COLCA1-203ENST00000532918 REC8O95072 547 aa13.1□□□□□ -0.31
COLCA1-203ENST00000532918 TPM2P07951 284 aa13.1□□□□□ -0.31
COLCA1-203ENST00000532918 DZIP1LQ8IYY4 767 aaKnown RBP13.1□□□□□ -0.31
COLCA1-203ENST00000532918 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
COLCA1-203ENST00000532918 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
COLCA1-203ENST00000532918 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
COLCA1-203ENST00000532918 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
COLCA1-203ENST00000532918 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
COLCA1-203ENST00000532918 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
COLCA1-203ENST00000532918 PRM3Q9NNZ6 103 aa13.09□□□□□ -0.31
COLCA1-203ENST00000532918 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
COLCA1-203ENST00000532918 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
COLCA1-203ENST00000532918 CPLX1O14810 134 aa13.09□□□□□ -0.31
COLCA1-203ENST00000532918 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
COLCA1-203ENST00000532918 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
COLCA1-203ENST00000532918 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
COLCA1-203ENST00000532918 GNL3LQ9NVN8 582 aaKnown RBP13.08□□□□□ -0.32
COLCA1-203ENST00000532918 PHF14O94880 888 aa13.08□□□□□ -0.32
COLCA1-203ENST00000532918 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
COLCA1-203ENST00000532918 AAMPQ13685 434 aa13.08□□□□□ -0.32
COLCA1-203ENST00000532918 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
COLCA1-203ENST00000532918 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
COLCA1-203ENST00000532918 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
COLCA1-203ENST00000532918 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
COLCA1-203ENST00000532918 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
COLCA1-203ENST00000532918 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
COLCA1-203ENST00000532918 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
COLCA1-203ENST00000532918 ATAD2Q6PL18 1390 aa13.07□□□□□ -0.32
COLCA1-203ENST00000532918 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
COLCA1-203ENST00000532918 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
COLCA1-203ENST00000532918 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
COLCA1-203ENST00000532918 GNAI3P08754 354 aa13.06□□□□□ -0.32
COLCA1-203ENST00000532918 CREBRFQ8IUR6 639 aa13.06□□□□□ -0.32
COLCA1-203ENST00000532918 GOLGA6L1Q8N7Z2 621 aa13.05□□□□□ -0.32
COLCA1-203ENST00000532918 SLC3A2P08195 630 aaKnown RBP13.05□□□□□ -0.32
COLCA1-203ENST00000532918 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
COLCA1-203ENST00000532918 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
COLCA1-203ENST00000532918 HOMEZQ8IX15 550 aa13.05□□□□□ -0.32
COLCA1-203ENST00000532918 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
COLCA1-203ENST00000532918 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
COLCA1-203ENST00000532918 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
COLCA1-203ENST00000532918 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
COLCA1-203ENST00000532918 MTHFSP49914 203 aa13.04□□□□□ -0.32
COLCA1-203ENST00000532918 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
COLCA1-203ENST00000532918 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
COLCA1-203ENST00000532918 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
COLCA1-203ENST00000532918 TPM3P06753 285 aa13.04□□□□□ -0.32
COLCA1-203ENST00000532918 ANO2Q9NQ90 1003 aa13.04□□□□□ -0.32
COLCA1-203ENST00000532918 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
COLCA1-203ENST00000532918 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
COLCA1-203ENST00000532918 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
COLCA1-203ENST00000532918 COG6Q9Y2V7 657 aa13.03□□□□□ -0.32
COLCA1-203ENST00000532918 FAM177BA6PVY3 158 aa13.02□□□□□ -0.32
COLCA1-203ENST00000532918 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.32
COLCA1-203ENST00000532918 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.32
COLCA1-203ENST00000532918 ADGRL1O94910 1474 aa13.02□□□□□ -0.32
COLCA1-203ENST00000532918 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.32
COLCA1-203ENST00000532918 DAPK1P53355 1430 aa13.02□□□□□ -0.33
COLCA1-203ENST00000532918 PLIN1O60240 522 aa13.02□□□□□ -0.33
COLCA1-203ENST00000532918 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.33
COLCA1-203ENST00000532918 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
COLCA1-203ENST00000532918 CCDC7Q96M83 1385 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 SLKQ9H2G2 1235 aaPredicted RBP13.01□□□□□ -0.33
COLCA1-203ENST00000532918 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 NINLQ9Y2I6 1382 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 TPM1P09493 284 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
COLCA1-203ENST00000532918 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 PRKAR2BP31323 418 aa13.01□□□□□ -0.33
COLCA1-203ENST00000532918 DENND4BO75064 1496 aaPredicted RBP13□□□□□ -0.33
COLCA1-203ENST00000532918 XBP1P17861 261 aa13□□□□□ -0.33
COLCA1-203ENST00000532918 GRIN2AQ12879 1464 aa13□□□□□ -0.33
COLCA1-203ENST00000532918 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
COLCA1-203ENST00000532918 PRXQ9BXM0 1461 aa13□□□□□ -0.33
COLCA1-203ENST00000532918 PES1O00541 588 aaKnown RBP13□□□□□ -0.33
COLCA1-203ENST00000532918 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms