RNA–Protein interactions for RNA: ENST00000532840.5

C11orf49-219, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-219ENST00000532840 C19orf44Q9H6X5 657 aa12.67□□□□□ -0.38
C11orf49-219ENST00000532840 TRAK1Q9UPV9 953 aa12.67□□□□□ -0.38
C11orf49-219ENST00000532840 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
C11orf49-219ENST00000532840 NALCNQ8IZF0 1738 aa12.66□□□□□ -0.38
C11orf49-219ENST00000532840 FAM135BQ49AJ0 1406 aa12.66□□□□□ -0.38
C11orf49-219ENST00000532840 ADGRL3Q9HAR2 1447 aa12.66□□□□□ -0.38
C11orf49-219ENST00000532840 DLC1Q96QB1 1528 aa12.66□□□□□ -0.38
C11orf49-219ENST00000532840 PRAM1Q96QH2 718 aa12.65□□□□□ -0.38
C11orf49-219ENST00000532840 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
C11orf49-219ENST00000532840 MSH6P52701 1360 aa12.64□□□□□ -0.39
C11orf49-219ENST00000532840 TOM1O60784 492 aa12.63□□□□□ -0.39
C11orf49-219ENST00000532840 PIP4K2BP78356 416 aa12.63□□□□□ -0.39
C11orf49-219ENST00000532840 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
C11orf49-219ENST00000532840 SLAIN2Q9P270 581 aa12.63□□□□□ -0.39
C11orf49-219ENST00000532840 MST1RQ04912 1400 aa12.62□□□□□ -0.39
C11orf49-219ENST00000532840 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
C11orf49-219ENST00000532840 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
C11orf49-219ENST00000532840 DCCP43146 1447 aa12.62□□□□□ -0.39
C11orf49-219ENST00000532840 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
C11orf49-219ENST00000532840 C14orf37Q86TY3 774 aa12.61□□□□□ -0.39
C11orf49-219ENST00000532840 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
C11orf49-219ENST00000532840 ROCK2O75116 1388 aaKnown RBP12.59□□□□□ -0.39
C11orf49-219ENST00000532840 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
C11orf49-219ENST00000532840 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
C11orf49-219ENST00000532840 ATF3P18847 181 aa12.58□□□□□ -0.4
C11orf49-219ENST00000532840 HSPA1LP34931 641 aa12.58□□□□□ -0.4
C11orf49-219ENST00000532840 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
C11orf49-219ENST00000532840 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
C11orf49-219ENST00000532840 POGKQ9P215 609 aa12.58□□□□□ -0.4
C11orf49-219ENST00000532840 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
C11orf49-219ENST00000532840 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
C11orf49-219ENST00000532840 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
C11orf49-219ENST00000532840 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
C11orf49-219ENST00000532840 PRR36Q9H6K5 1346 aa12.57□□□□□ -0.4
C11orf49-219ENST00000532840 DDX17Q92841 729 aaKnown RBP12.56□□□□□ -0.4
C11orf49-219ENST00000532840 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
C11orf49-219ENST00000532840 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
C11orf49-219ENST00000532840 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
C11orf49-219ENST00000532840 FMN2Q9NZ56 1722 aa12.55□□□□□ -0.4
C11orf49-219ENST00000532840 RGPD8O14715 1765 aaPredicted RBP12.55□□□□□ -0.4
C11orf49-219ENST00000532840 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
C11orf49-219ENST00000532840 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
C11orf49-219ENST00000532840 TESK2Q96S53 571 aa12.53□□□□□ -0.4
C11orf49-219ENST00000532840 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
C11orf49-219ENST00000532840 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.41
C11orf49-219ENST00000532840 QRICH2Q9H0J4 1663 aa12.51□□□□□ -0.41
C11orf49-219ENST00000532840 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
C11orf49-219ENST00000532840 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
C11orf49-219ENST00000532840 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
C11orf49-219ENST00000532840 COL16A1Q07092 1604 aaPredicted RBP12.49□□□□□ -0.41
C11orf49-219ENST00000532840 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
C11orf49-219ENST00000532840 ATP7BP35670 1465 aa12.49□□□□□ -0.41
C11orf49-219ENST00000532840 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
C11orf49-219ENST00000532840 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
C11orf49-219ENST00000532840 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
C11orf49-219ENST00000532840 USP47Q96K76 1375 aa12.48□□□□□ -0.41
C11orf49-219ENST00000532840 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
C11orf49-219ENST00000532840 SOS2Q07890 1332 aaPredicted RBP12.48□□□□□ -0.41
C11orf49-219ENST00000532840 FOXO3O43524 673 aa12.48□□□□□ -0.41
C11orf49-219ENST00000532840 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
C11orf49-219ENST00000532840 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
C11orf49-219ENST00000532840 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
C11orf49-219ENST00000532840 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
C11orf49-219ENST00000532840 PXDNQ92626 1479 aa12.46□□□□□ -0.41
C11orf49-219ENST00000532840 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
C11orf49-219ENST00000532840 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
C11orf49-219ENST00000532840 EIF3AQ14152 1382 aaKnown RBP12.44□□□□□ -0.42
C11orf49-219ENST00000532840 PLEKHG3A1L390 1219 aa12.44□□□□□ -0.42
C11orf49-219ENST00000532840 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
C11orf49-219ENST00000532840 DISP3Q9P2K9 1392 aa12.43□□□□□ -0.42
C11orf49-219ENST00000532840 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
C11orf49-219ENST00000532840 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
C11orf49-219ENST00000532840 C11orf95C9JLR9 678 aaPredicted RBP12.42□□□□□ -0.42
C11orf49-219ENST00000532840 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
C11orf49-219ENST00000532840 KRT28Q7Z3Y7 464 aa12.42□□□□□ -0.42
C11orf49-219ENST00000532840 CABP1Q9NZU7 370 aa12.42□□□□□ -0.42
C11orf49-219ENST00000532840 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
C11orf49-219ENST00000532840 ACEP12821 1306 aa12.41□□□□□ -0.42
C11orf49-219ENST00000532840 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
C11orf49-219ENST00000532840 KIF1AQ12756 1690 aa12.41□□□□□ -0.42
C11orf49-219ENST00000532840 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
C11orf49-219ENST00000532840 PPIP5K1Q6PFW1 1433 aa12.4□□□□□ -0.42
C11orf49-219ENST00000532840 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
C11orf49-219ENST00000532840 JCADQ9P266 1359 aa12.4□□□□□ -0.42
C11orf49-219ENST00000532840 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.43
C11orf49-219ENST00000532840 TRPM3Q9HCF6 1732 aaPredicted RBP12.4□□□□□ -0.43
C11orf49-219ENST00000532840 SPATA31A3Q5VYP0 1347 aa12.39□□□□□ -0.43
C11orf49-219ENST00000532840 SLC12A5Q9H2X9 1139 aa12.39□□□□□ -0.43
C11orf49-219ENST00000532840 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
C11orf49-219ENST00000532840 LRP6O75581 1613 aa12.38□□□□□ -0.43
C11orf49-219ENST00000532840 EIF4G2P78344 907 aaKnown RBP eCLIP12.38□□□□□ -0.43
C11orf49-219ENST00000532840 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
C11orf49-219ENST00000532840 SHPRHQ149N8 1683 aa12.38□□□□□ -0.43
C11orf49-219ENST00000532840 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
C11orf49-219ENST00000532840 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
C11orf49-219ENST00000532840 PSME1Q06323 249 aa12.37□□□□□ -0.43
C11orf49-219ENST00000532840 NGDNQ8NEJ9 315 aaKnown RBP12.37□□□□□ -0.43
C11orf49-219ENST00000532840 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
C11orf49-219ENST00000532840 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
C11orf49-219ENST00000532840 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms