RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
LINC00958-206ENST00000532541 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
LINC00958-206ENST00000532541 RGS12O14924 1447 aa11.88□□□□□ -0.51
LINC00958-206ENST00000532541 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
LINC00958-206ENST00000532541 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
LINC00958-206ENST00000532541 USP21Q9UK80 565 aa11.88□□□□□ -0.51
LINC00958-206ENST00000532541 FOXO3O43524 673 aa11.87□□□□□ -0.51
LINC00958-206ENST00000532541 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
LINC00958-206ENST00000532541 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
LINC00958-206ENST00000532541 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.515e-7■■□□□ 11.8
LINC00958-206ENST00000532541 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
LINC00958-206ENST00000532541 CDK12Q9NYV4 1490 aaPredicted RBP11.84□□□□□ -0.51
LINC00958-206ENST00000532541 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
LINC00958-206ENST00000532541 ANKRD30BQ9BXX2 1392 aa11.83□□□□□ -0.52
LINC00958-206ENST00000532541 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
LINC00958-206ENST00000532541 TRPC5Q9UL62 973 aaPredicted RBP11.83□□□□□ -0.52
LINC00958-206ENST00000532541 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
LINC00958-206ENST00000532541 LRPPRCP42704 1394 aaKnown RBP11.82□□□□□ -0.52
LINC00958-206ENST00000532541 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
LINC00958-206ENST00000532541 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
LINC00958-206ENST00000532541 LAMC1P11047 1609 aa11.82□□□□□ -0.52
LINC00958-206ENST00000532541 PIK3C2GO75747 1445 aa11.8□□□□□ -0.52
LINC00958-206ENST00000532541 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
LINC00958-206ENST00000532541 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
LINC00958-206ENST00000532541 CFAP70Q5T0N1 1121 aa11.8□□□□□ -0.52
LINC00958-206ENST00000532541 PXDNQ92626 1479 aa11.8□□□□□ -0.52
LINC00958-206ENST00000532541 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
LINC00958-206ENST00000532541 KNDC1Q76NI1 1749 aa11.79□□□□□ -0.52
LINC00958-206ENST00000532541 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
LINC00958-206ENST00000532541 COL22A1Q8NFW1 1626 aaPredicted RBP11.78□□□□□ -0.52
LINC00958-206ENST00000532541 MYOM2P54296 1465 aa11.78□□□□□ -0.52
LINC00958-206ENST00000532541 KRT28Q7Z3Y7 464 aa11.78□□□□□ -0.52
LINC00958-206ENST00000532541 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
LINC00958-206ENST00000532541 POGKQ9P215 609 aa11.78□□□□□ -0.52
LINC00958-206ENST00000532541 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
LINC00958-206ENST00000532541 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
LINC00958-206ENST00000532541 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
LINC00958-206ENST00000532541 ABCC11Q96J66 1382 aa11.78□□□□□ -0.52
LINC00958-206ENST00000532541 TECPR2O15040 1411 aa11.77□□□□□ -0.52
LINC00958-206ENST00000532541 ATRNO75882 1429 aa11.77□□□□□ -0.52
LINC00958-206ENST00000532541 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.52
LINC00958-206ENST00000532541 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
LINC00958-206ENST00000532541 CABLES1Q8TDN4 633 aa11.77□□□□□ -0.53
LINC00958-206ENST00000532541 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
LINC00958-206ENST00000532541 KIF1AQ12756 1690 aa11.76□□□□□ -0.53
LINC00958-206ENST00000532541 A0A0G2JS52 829 aa11.76□□□□□ -0.53
LINC00958-206ENST00000532541 MYT1Q01538 1121 aa11.76□□□□□ -0.53
LINC00958-206ENST00000532541 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
LINC00958-206ENST00000532541 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
LINC00958-206ENST00000532541 C14orf93Q9H972 538 aaKnown RBP11.76□□□□□ -0.53
LINC00958-206ENST00000532541 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
LINC00958-206ENST00000532541 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
LINC00958-206ENST00000532541 PSME1Q06323 249 aa11.75□□□□□ -0.53
LINC00958-206ENST00000532541 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
LINC00958-206ENST00000532541 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
LINC00958-206ENST00000532541 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
LINC00958-206ENST00000532541 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
LINC00958-206ENST00000532541 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
LINC00958-206ENST00000532541 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
LINC00958-206ENST00000532541 UNC5CLQ8IV45 518 aa11.73□□□□□ -0.53
LINC00958-206ENST00000532541 USP32Q8NFA0 1604 aa11.72□□□□□ -0.53
LINC00958-206ENST00000532541 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
LINC00958-206ENST00000532541 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
LINC00958-206ENST00000532541 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
LINC00958-206ENST00000532541 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
LINC00958-206ENST00000532541 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
LINC00958-206ENST00000532541 PLCH1Q4KWH8 1693 aa11.69□□□□□ -0.54
LINC00958-206ENST00000532541 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
LINC00958-206ENST00000532541 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
LINC00958-206ENST00000532541 GLI3P10071 1580 aa11.69□□□□□ -0.54
LINC00958-206ENST00000532541 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
LINC00958-206ENST00000532541 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
LINC00958-206ENST00000532541 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
LINC00958-206ENST00000532541 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
LINC00958-206ENST00000532541 SLIT2O94813 1529 aa11.68□□□□□ -0.54
LINC00958-206ENST00000532541 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
LINC00958-206ENST00000532541 GPRASP1Q5JY77 1395 aa11.67□□□□□ -0.54
LINC00958-206ENST00000532541 ABCA3Q99758 1704 aa11.67□□□□□ -0.54
LINC00958-206ENST00000532541 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
LINC00958-206ENST00000532541 SBNO1A3KN83 1393 aa11.67□□□□□ -0.54
LINC00958-206ENST00000532541 DLC1Q96QB1 1528 aa11.66□□□□□ -0.54
LINC00958-206ENST00000532541 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
LINC00958-206ENST00000532541 ANKARQ7Z5J8 1434 aa11.66□□□□□ -0.54
LINC00958-206ENST00000532541 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
LINC00958-206ENST00000532541 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
LINC00958-206ENST00000532541 VPS72Q15906 364 aa11.65□□□□□ -0.54
LINC00958-206ENST00000532541 BTG4Q9NY30 223 aa11.65□□□□□ -0.54
LINC00958-206ENST00000532541 ADGRB1O14514 1584 aa11.65□□□□□ -0.54
LINC00958-206ENST00000532541 ADGRB2O60241 1585 aa11.64□□□□□ -0.55
LINC00958-206ENST00000532541 WASLO00401 505 aaPredicted RBP11.64□□□□□ -0.55
LINC00958-206ENST00000532541 FAM98CQ17RN3 349 aaKnown RBP11.64□□□□□ -0.55
LINC00958-206ENST00000532541 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
LINC00958-206ENST00000532541 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
LINC00958-206ENST00000532541 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
LINC00958-206ENST00000532541 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
LINC00958-206ENST00000532541 KRT27Q7Z3Y8 459 aa11.63□□□□□ -0.55
LINC00958-206ENST00000532541 TULP4Q9NRJ4 1543 aa11.63□□□□□ -0.55
LINC00958-206ENST00000532541 NWD2Q9ULI1 1742 aa11.63□□□□□ -0.55
LINC00958-206ENST00000532541 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
LINC00958-206ENST00000532541 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms