RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
CPNE7-206ENST00000532500 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
CPNE7-206ENST00000532500 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
CPNE7-206ENST00000532500 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
CPNE7-206ENST00000532500 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
CPNE7-206ENST00000532500 XPCQ01831 940 aaPredicted RBP16.84■□□□□ 0.29
CPNE7-206ENST00000532500 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
CPNE7-206ENST00000532500 AFF2P51816 1311 aa16.84■□□□□ 0.29
CPNE7-206ENST00000532500 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
CPNE7-206ENST00000532500 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
CPNE7-206ENST00000532500 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
CPNE7-206ENST00000532500 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
CPNE7-206ENST00000532500 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
CPNE7-206ENST00000532500 C8orf37Q96NL8 207 aa16.83■□□□□ 0.28
CPNE7-206ENST00000532500 MYOM2P54296 1465 aa16.81■□□□□ 0.28
CPNE7-206ENST00000532500 TECPR2O15040 1411 aa16.81■□□□□ 0.28
CPNE7-206ENST00000532500 ZNF772Q68DY9 489 aaPredicted RBP16.81■□□□□ 0.28
CPNE7-206ENST00000532500 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
CPNE7-206ENST00000532500 KIF1AQ12756 1690 aa16.79■□□□□ 0.28
CPNE7-206ENST00000532500 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
CPNE7-206ENST00000532500 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
CPNE7-206ENST00000532500 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
CPNE7-206ENST00000532500 FOXO3O43524 673 aa16.78■□□□□ 0.28
CPNE7-206ENST00000532500 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
CPNE7-206ENST00000532500 PXDNQ92626 1479 aa16.78■□□□□ 0.28
CPNE7-206ENST00000532500 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
CPNE7-206ENST00000532500 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
CPNE7-206ENST00000532500 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
CPNE7-206ENST00000532500 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
CPNE7-206ENST00000532500 RXRBP28702 533 aa16.76■□□□□ 0.27
CPNE7-206ENST00000532500 NGLY1Q96IV0 654 aa16.76■□□□□ 0.27
CPNE7-206ENST00000532500 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
CPNE7-206ENST00000532500 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
CPNE7-206ENST00000532500 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
CPNE7-206ENST00000532500 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
CPNE7-206ENST00000532500 ARHGEF28Q8N1W1 1705 aaKnown RBP16.74■□□□□ 0.27
CPNE7-206ENST00000532500 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
CPNE7-206ENST00000532500 POGKQ9P215 609 aa16.73■□□□□ 0.27
CPNE7-206ENST00000532500 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
CPNE7-206ENST00000532500 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
CPNE7-206ENST00000532500 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
CPNE7-206ENST00000532500 ABCA3Q99758 1704 aa16.72■□□□□ 0.27
CPNE7-206ENST00000532500 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
CPNE7-206ENST00000532500 RGS12O14924 1447 aa16.7■□□□□ 0.26
CPNE7-206ENST00000532500 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
CPNE7-206ENST00000532500 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
CPNE7-206ENST00000532500 USP21Q9UK80 565 aa16.68■□□□□ 0.26
CPNE7-206ENST00000532500 PLCH1Q4KWH8 1693 aa16.68■□□□□ 0.26
CPNE7-206ENST00000532500 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
CPNE7-206ENST00000532500 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
CPNE7-206ENST00000532500 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
CPNE7-206ENST00000532500 PHF8Q9UPP1 1060 aa16.67■□□□□ 0.26
CPNE7-206ENST00000532500 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
CPNE7-206ENST00000532500 CDK12Q9NYV4 1490 aaPredicted RBP16.66■□□□□ 0.26
CPNE7-206ENST00000532500 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
CPNE7-206ENST00000532500 RBM6P78332 1123 aaKnown RBP16.65■□□□□ 0.26
CPNE7-206ENST00000532500 CABLES1Q8TDN4 633 aa16.65■□□□□ 0.26
CPNE7-206ENST00000532500 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
CPNE7-206ENST00000532500 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
CPNE7-206ENST00000532500 BRWD3Q6RI45 1802 aa16.65■□□□□ 0.26
CPNE7-206ENST00000532500 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
CPNE7-206ENST00000532500 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
CPNE7-206ENST00000532500 EP400Q96L91 3159 aa16.63■□□□□ 0.25
CPNE7-206ENST00000532500 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
CPNE7-206ENST00000532500 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
CPNE7-206ENST00000532500 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
CPNE7-206ENST00000532500 HRCP23327 699 aa16.62■□□□□ 0.25
CPNE7-206ENST00000532500 PSME1Q06323 249 aa16.62■□□□□ 0.25
CPNE7-206ENST00000532500 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
CPNE7-206ENST00000532500 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
CPNE7-206ENST00000532500 ATRNO75882 1429 aa16.61■□□□□ 0.25
CPNE7-206ENST00000532500 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
CPNE7-206ENST00000532500 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
CPNE7-206ENST00000532500 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
CPNE7-206ENST00000532500 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
CPNE7-206ENST00000532500 ANKARQ7Z5J8 1434 aa16.59■□□□□ 0.25
CPNE7-206ENST00000532500 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
CPNE7-206ENST00000532500 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
CPNE7-206ENST00000532500 GLI3P10071 1580 aa16.58■□□□□ 0.24
CPNE7-206ENST00000532500 CRYBG1Q9Y4K1 1723 aa16.58■□□□□ 0.24
CPNE7-206ENST00000532500 TOPAZ1Q8N9V7 1692 aa16.57■□□□□ 0.24
CPNE7-206ENST00000532500 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
CPNE7-206ENST00000532500 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
CPNE7-206ENST00000532500 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
CPNE7-206ENST00000532500 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
CPNE7-206ENST00000532500 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
CPNE7-206ENST00000532500 SBNO1A3KN83 1393 aa16.54■□□□□ 0.24
CPNE7-206ENST00000532500 SLIT2O94813 1529 aa16.54■□□□□ 0.24
CPNE7-206ENST00000532500 ATP7BP35670 1465 aa16.54■□□□□ 0.24
CPNE7-206ENST00000532500 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
CPNE7-206ENST00000532500 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
CPNE7-206ENST00000532500 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
CPNE7-206ENST00000532500 GPRASP1Q5JY77 1395 aa16.53■□□□□ 0.24
CPNE7-206ENST00000532500 PHRF1Q9P1Y6 1649 aaKnown RBP16.53■□□□□ 0.24
CPNE7-206ENST00000532500 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
CPNE7-206ENST00000532500 CCDC9Q9Y3X0 531 aaKnown RBP16.53■□□□□ 0.24
CPNE7-206ENST00000532500 ATAD2Q6PL18 1390 aa16.52■□□□□ 0.24
CPNE7-206ENST00000532500 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.24
CPNE7-206ENST00000532500 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
CPNE7-206ENST00000532500 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms