RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 SLC4A3P48751 1232 aa18.25■□□□□ 0.51
LRRK1-209ENST00000532145 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
LRRK1-209ENST00000532145 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
LRRK1-209ENST00000532145 PPLO60437 1756 aa18.25■□□□□ 0.51
LRRK1-209ENST00000532145 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
LRRK1-209ENST00000532145 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
LRRK1-209ENST00000532145 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
LRRK1-209ENST00000532145 AAMPQ13685 434 aa18.24■□□□□ 0.51
LRRK1-209ENST00000532145 WDR63Q8IWG1 891 aa18.23■□□□□ 0.51
LRRK1-209ENST00000532145 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
LRRK1-209ENST00000532145 PUS7Q96PZ0 661 aaKnown RBP18.23■□□□□ 0.51
LRRK1-209ENST00000532145 CHGAP10645 457 aaKnown RBP18.22■□□□□ 0.51
LRRK1-209ENST00000532145 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
LRRK1-209ENST00000532145 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
LRRK1-209ENST00000532145 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
LRRK1-209ENST00000532145 PANK1Q8TE04 598 aa18.22■□□□□ 0.51
LRRK1-209ENST00000532145 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
LRRK1-209ENST00000532145 RARSP54136 660 aaKnown RBP18.22■□□□□ 0.51
LRRK1-209ENST00000532145 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
LRRK1-209ENST00000532145 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
LRRK1-209ENST00000532145 CANXP27824 592 aaKnown RBP18.21■□□□□ 0.51
LRRK1-209ENST00000532145 VIRMAQ69YN4 1812 aaKnown RBP18.2■□□□□ 0.5
LRRK1-209ENST00000532145 POGZQ7Z3K3 1410 aa18.2■□□□□ 0.5
LRRK1-209ENST00000532145 USP19O94966 1318 aa18.19■□□□□ 0.5
LRRK1-209ENST00000532145 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
LRRK1-209ENST00000532145 MTHFSP49914 203 aa18.19■□□□□ 0.5
LRRK1-209ENST00000532145 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
LRRK1-209ENST00000532145 RRP7AQ9Y3A4 280 aaKnown RBP18.19■□□□□ 0.5
LRRK1-209ENST00000532145 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
LRRK1-209ENST00000532145 NSD2O96028 1365 aa18.18■□□□□ 0.5
LRRK1-209ENST00000532145 GSE1Q14687 1217 aa18.18■□□□□ 0.5
LRRK1-209ENST00000532145 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
LRRK1-209ENST00000532145 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
LRRK1-209ENST00000532145 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
LRRK1-209ENST00000532145 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
LRRK1-209ENST00000532145 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
LRRK1-209ENST00000532145 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
LRRK1-209ENST00000532145 ABCC3O15438 1527 aa18.17■□□□□ 0.5
LRRK1-209ENST00000532145 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
LRRK1-209ENST00000532145 GGT6Q6P531 493 aa18.16■□□□□ 0.5
LRRK1-209ENST00000532145 GLI2P10070 1586 aa18.15■□□□□ 0.5
LRRK1-209ENST00000532145 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
LRRK1-209ENST00000532145 TULP4Q9NRJ4 1543 aa18.15■□□□□ 0.5
LRRK1-209ENST00000532145 RLBP1P12271 317 aa18.14■□□□□ 0.49
LRRK1-209ENST00000532145 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
LRRK1-209ENST00000532145 MYH16Q9H6N6 1097 aa18.13■□□□□ 0.49
LRRK1-209ENST00000532145 PCDHB15Q9Y5E8 787 aa18.13■□□□□ 0.49
LRRK1-209ENST00000532145 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
LRRK1-209ENST00000532145 VGFO15240 615 aaPredicted RBP18.12■□□□□ 0.49
LRRK1-209ENST00000532145 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
LRRK1-209ENST00000532145 IL27Q8NEV9 243 aa18.12■□□□□ 0.49
LRRK1-209ENST00000532145 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
LRRK1-209ENST00000532145 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
LRRK1-209ENST00000532145 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
LRRK1-209ENST00000532145 SEC24BO95487 1268 aa18.12■□□□□ 0.49
LRRK1-209ENST00000532145 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
LRRK1-209ENST00000532145 CAMSAP1Q5T5Y3 1602 aa18.11■□□□□ 0.49
LRRK1-209ENST00000532145 TNNQ9UQP3 1299 aa18.09■□□□□ 0.49
LRRK1-209ENST00000532145 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
LRRK1-209ENST00000532145 CT47B1P0C2W7 299 aaPredicted RBP18.09■□□□□ 0.49
LRRK1-209ENST00000532145 FRAT2O75474 233 aaPredicted RBP18.08■□□□□ 0.49
LRRK1-209ENST00000532145 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.49
LRRK1-209ENST00000532145 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.49
LRRK1-209ENST00000532145 BCL2L13Q9BXK5 485 aa18.08■□□□□ 0.49
LRRK1-209ENST00000532145 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
LRRK1-209ENST00000532145 ABCC11Q96J66 1382 aa18.08■□□□□ 0.48
LRRK1-209ENST00000532145 ZFYVE9O95405 1425 aa18.07■□□□□ 0.48
LRRK1-209ENST00000532145 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
LRRK1-209ENST00000532145 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
LRRK1-209ENST00000532145 ARHGAP31Q2M1Z3 1444 aa18.06■□□□□ 0.48
LRRK1-209ENST00000532145 BECN1Q14457 450 aa18.06■□□□□ 0.48
LRRK1-209ENST00000532145 PDZRN3Q9UPQ7 1066 aa18.06■□□□□ 0.48
LRRK1-209ENST00000532145 CABP2Q9NPB3 220 aa18.06■□□□□ 0.48
LRRK1-209ENST00000532145 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
LRRK1-209ENST00000532145 PLEKHF1Q96S99 279 aa18.05■□□□□ 0.48
LRRK1-209ENST00000532145 A0A1W2PP64 1363 aa18.05■□□□□ 0.48
LRRK1-209ENST00000532145 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-209ENST00000532145 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
LRRK1-209ENST00000532145 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
LRRK1-209ENST00000532145 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.48
LRRK1-209ENST00000532145 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
LRRK1-209ENST00000532145 NEO1Q92859 1461 aa18.02■□□□□ 0.48
LRRK1-209ENST00000532145 MED14O60244 1454 aa18.01■□□□□ 0.47
LRRK1-209ENST00000532145 IDI1Q13907 227 aa18.01■□□□□ 0.47
LRRK1-209ENST00000532145 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
LRRK1-209ENST00000532145 SLC52A1Q9NWF4 448 aa18.01■□□□□ 0.47
LRRK1-209ENST00000532145 FTSJ3Q8IY81 847 aaKnown RBP18■□□□□ 0.47
LRRK1-209ENST00000532145 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
LRRK1-209ENST00000532145 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
LRRK1-209ENST00000532145 TSR2Q969E8 191 aaKnown RBP18■□□□□ 0.47
LRRK1-209ENST00000532145 IL16Q14005 1332 aa17.99■□□□□ 0.47
LRRK1-209ENST00000532145 ATAD2Q6PL18 1390 aa17.99■□□□□ 0.47
LRRK1-209ENST00000532145 ANTXR1Q9H6X2 564 aa17.99■□□□□ 0.47
LRRK1-209ENST00000532145 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
LRRK1-209ENST00000532145 PTPRMP28827 1452 aa17.98■□□□□ 0.47
LRRK1-209ENST00000532145 RAPGEF3O95398 923 aa17.98■□□□□ 0.47
LRRK1-209ENST00000532145 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
LRRK1-209ENST00000532145 TRIM27P14373 513 aa17.98■□□□□ 0.47
LRRK1-209ENST00000532145 SRPK2P78362 688 aaKnown RBP17.98■□□□□ 0.47
LRRK1-209ENST00000532145 HDAC1Q13547 482 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms