RNA–Protein interactions for RNA: ENST00000532138.1

SCN4B-206, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4

Gene SCN4B, Length 850 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-206ENST00000532138 POTEAQ6S8J7 498 aa28.56■■■□□ 2.16
SCN4B-206ENST00000532138 TRAK1Q9UPV9 953 aa28.54■■■□□ 2.16
SCN4B-206ENST00000532138 RBM33Q96EV2 1170 aaKnown RBP28.49■■■□□ 2.15
SCN4B-206ENST00000532138 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
SCN4B-206ENST00000532138 NALCNQ8IZF0 1738 aa28.49■■■□□ 2.15
SCN4B-206ENST00000532138 PLEKHH1Q9ULM0 1364 aa28.48■■■□□ 2.15
SCN4B-206ENST00000532138 ADGRL3Q9HAR2 1447 aa28.47■■■□□ 2.15
SCN4B-206ENST00000532138 WAPLQ7Z5K2 1190 aa28.47■■■□□ 2.15
SCN4B-206ENST00000532138 PRAM1Q96QH2 718 aa28.47■■■□□ 2.15
SCN4B-206ENST00000532138 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.46■■■□□ 2.15
SCN4B-206ENST00000532138 POGKQ9P215 609 aa28.45■■■□□ 2.14
SCN4B-206ENST00000532138 MSH6P52701 1360 aa28.45■■■□□ 2.14
SCN4B-206ENST00000532138 C14orf37Q86TY3 774 aa28.44■■■□□ 2.14
SCN4B-206ENST00000532138 EIF3AQ14152 1382 aaKnown RBP28.44■■■□□ 2.14
SCN4B-206ENST00000532138 DCCP43146 1447 aa28.42■■■□□ 2.14
SCN4B-206ENST00000532138 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
SCN4B-206ENST00000532138 QRICH2Q9H0J4 1663 aa28.4■■■□□ 2.14
SCN4B-206ENST00000532138 ADGRB2O60241 1585 aa28.39■■■□□ 2.14
SCN4B-206ENST00000532138 CDC42BPGQ6DT37 1551 aa28.39■■■□□ 2.14
SCN4B-206ENST00000532138 CENPJQ9HC77 1338 aaPredicted RBP28.39■■■□□ 2.13
SCN4B-206ENST00000532138 SAFB2Q14151 953 aaKnown RBP eCLIP28.37■■■□□ 2.13
SCN4B-206ENST00000532138 ZEB1P37275 1124 aaPredicted RBP28.34■■■□□ 2.13
SCN4B-206ENST00000532138 CADPS2Q86UW7 1296 aa28.34■■■□□ 2.13
SCN4B-206ENST00000532138 USP47Q96K76 1375 aa28.34■■■□□ 2.13
SCN4B-206ENST00000532138 ATF3P18847 181 aa28.33■■■□□ 2.13
SCN4B-206ENST00000532138 MINK1Q8N4C8 1332 aaPredicted RBP28.32■■■□□ 2.12
SCN4B-206ENST00000532138 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
SCN4B-206ENST00000532138 SBNO2Q9Y2G9 1366 aa28.3■■■□□ 2.12
SCN4B-206ENST00000532138 MST1RQ04912 1400 aa28.26■■■□□ 2.12
SCN4B-206ENST00000532138 HIRIP3Q9BW71 556 aaPredicted RBP28.26■■■□□ 2.11
SCN4B-206ENST00000532138 ST20-MTHFSA0A0A6YYL1 179 aa28.25■■■□□ 2.11
SCN4B-206ENST00000532138 WASLO00401 505 aaPredicted RBP28.24■■■□□ 2.11
SCN4B-206ENST00000532138 EIF4G2P78344 907 aaKnown RBP eCLIP28.23■■■□□ 2.11
SCN4B-206ENST00000532138 UPF1Q92900 1129 aaKnown RBP eCLIP28.22■■■□□ 2.11
SCN4B-206ENST00000532138 SLAIN2Q9P270 581 aa28.22■■■□□ 2.11
SCN4B-206ENST00000532138 TULP4Q9NRJ4 1543 aa28.22■■■□□ 2.11
SCN4B-206ENST00000532138 C1orf167Q5SNV9 1468 aa28.21■■■□□ 2.11
SCN4B-206ENST00000532138 ANKARQ7Z5J8 1434 aa28.2■■■□□ 2.11
SCN4B-206ENST00000532138 RGPD8O14715 1765 aaPredicted RBP28.19■■■□□ 2.1
SCN4B-206ENST00000532138 SLC24A1O60721 1099 aa28.19■■■□□ 2.1
SCN4B-206ENST00000532138 TESK2Q96S53 571 aa28.19■■■□□ 2.1
SCN4B-206ENST00000532138 EVC2Q86UK5 1308 aa28.18■■■□□ 2.1
SCN4B-206ENST00000532138 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
SCN4B-206ENST00000532138 CDK19Q9BWU1 502 aa28.18■■■□□ 2.1
SCN4B-206ENST00000532138 HSPA5P11021 654 aaKnown RBP28.17■■■□□ 2.1
SCN4B-206ENST00000532138 ROBO1Q9Y6N7 1651 aa28.16■■■□□ 2.1
SCN4B-206ENST00000532138 ITSN1Q15811 1721 aa28.15■■■□□ 2.1
SCN4B-206ENST00000532138 ATP7BP35670 1465 aa28.14■■■□□ 2.09
SCN4B-206ENST00000532138 NUTM2FA1L443 756 aa28.13■■■□□ 2.09
SCN4B-206ENST00000532138 SRPK2P78362 688 aaKnown RBP28.12■■■□□ 2.09
SCN4B-206ENST00000532138 TOPAZ1Q8N9V7 1692 aa28.12■■■□□ 2.09
SCN4B-206ENST00000532138 PRR36Q9H6K5 1346 aa28.12■■■□□ 2.09
SCN4B-206ENST00000532138 KIF1AQ12756 1690 aa28.11■■■□□ 2.09
SCN4B-206ENST00000532138 TMF1P82094 1093 aa28.1■■■□□ 2.09
SCN4B-206ENST00000532138 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
SCN4B-206ENST00000532138 NUDT16Q96DE0 195 aaKnown RBP28.09■■■□□ 2.09
SCN4B-206ENST00000532138 CABP2Q9NPB3 220 aa28.09■■■□□ 2.09
SCN4B-206ENST00000532138 PUS7Q96PZ0 661 aaKnown RBP28.08■■■□□ 2.09
SCN4B-206ENST00000532138 ORAI2Q96SN7 254 aa28.08■■■□□ 2.09
SCN4B-206ENST00000532138 ESCO1Q5FWF5 840 aa28.07■■■□□ 2.08
SCN4B-206ENST00000532138 ATAD2Q6PL18 1390 aa28.07■■■□□ 2.08
SCN4B-206ENST00000532138 NHSL1Q5SYE7 1610 aa28.07■■■□□ 2.08
SCN4B-206ENST00000532138 CCDC61Q9Y6R9 512 aa28.05■■■□□ 2.08
SCN4B-206ENST00000532138 AHDC1Q5TGY3 1603 aaPredicted RBP28.04■■■□□ 2.08
SCN4B-206ENST00000532138 JCADQ9P266 1359 aa28.04■■■□□ 2.08
SCN4B-206ENST00000532138 CDCA8Q53HL2 280 aa28.03■■■□□ 2.08
SCN4B-206ENST00000532138 PHF8Q9UPP1 1060 aa28.03■■■□□ 2.08
SCN4B-206ENST00000532138 PPIP5K1Q6PFW1 1433 aa28.01■■■□□ 2.07
SCN4B-206ENST00000532138 PHLPP1O60346 1717 aa28■■■□□ 2.07
SCN4B-206ENST00000532138 PLEKHG3A1L390 1219 aa27.98■■■□□ 2.07
SCN4B-206ENST00000532138 ZNF772Q68DY9 489 aaPredicted RBP27.98■■■□□ 2.07
SCN4B-206ENST00000532138 NPHP3Q7Z494 1330 aa27.97■■■□□ 2.07
SCN4B-206ENST00000532138 PMFBP1Q8TBY8 1022 aa27.97■■■□□ 2.07
SCN4B-206ENST00000532138 NINLQ9Y2I6 1382 aa27.95■■■□□ 2.06
SCN4B-206ENST00000532138 LRP6O75581 1613 aa27.94■■■□□ 2.06
SCN4B-206ENST00000532138 COL16A1Q07092 1604 aaPredicted RBP27.94■■■□□ 2.06
SCN4B-206ENST00000532138 POLR3AO14802 1390 aaPredicted RBP27.94■■■□□ 2.06
SCN4B-206ENST00000532138 FOXO3O43524 673 aa27.93■■■□□ 2.06
SCN4B-206ENST00000532138 CABP1Q9NZU7 370 aa27.93■■■□□ 2.06
SCN4B-206ENST00000532138 AKAP12Q02952 1782 aa27.93■■■□□ 2.06
SCN4B-206ENST00000532138 PXDNQ92626 1479 aa27.92■■■□□ 2.06
SCN4B-206ENST00000532138 NGDNQ8NEJ9 315 aaKnown RBP27.92■■■□□ 2.06
SCN4B-206ENST00000532138 MEX3CQ5U5Q3 659 aaKnown RBP27.91■■■□□ 2.06
SCN4B-206ENST00000532138 DDX17Q92841 729 aaKnown RBP27.91■■■□□ 2.06
SCN4B-206ENST00000532138 ACEP12821 1306 aa27.91■■■□□ 2.06
SCN4B-206ENST00000532138 SOS2Q07890 1332 aaPredicted RBP27.91■■■□□ 2.06
SCN4B-206ENST00000532138 SPATA31A6Q5VVP1 1343 aa27.91■■■□□ 2.06
SCN4B-206ENST00000532138 MYOM1P52179 1685 aa27.91■■■□□ 2.06
SCN4B-206ENST00000532138 TMC1Q8TDI8 760 aa27.89■■■□□ 2.06
SCN4B-206ENST00000532138 SRCAPQ6ZRS2 3230 aa27.89■■■□□ 2.05
SCN4B-206ENST00000532138 C11orf95C9JLR9 678 aaPredicted RBP27.88■■■□□ 2.05
SCN4B-206ENST00000532138 RXRBP28702 533 aa27.88■■■□□ 2.05
SCN4B-206ENST00000532138 TRPM3Q9HCF6 1732 aaPredicted RBP27.87■■■□□ 2.05
SCN4B-206ENST00000532138 PSME1Q06323 249 aa27.87■■■□□ 2.05
SCN4B-206ENST00000532138 KRT28Q7Z3Y7 464 aa27.87■■■□□ 2.05
SCN4B-206ENST00000532138 SLC12A5Q9H2X9 1139 aa27.87■■■□□ 2.05
SCN4B-206ENST00000532138 MON2Q7Z3U7 1717 aa27.87■■■□□ 2.05
SCN4B-206ENST00000532138 CPSF1Q10570 1443 aaKnown RBP27.85■■■□□ 2.05
SCN4B-206ENST00000532138 CD163L1Q9NR16 1453 aa27.85■■■□□ 2.05
SCN4B-206ENST00000532138 KIF7Q2M1P5 1343 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms