RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ARHGEF28Q8N1W1 1705 aaKnown RBP31.63■■■□□ 2.65
LRRK1-208ENST00000532029 TOM1O60784 492 aa31.63■■■□□ 2.65
LRRK1-208ENST00000532029 SAFB2Q14151 953 aaKnown RBP eCLIP31.63■■■□□ 2.65
LRRK1-208ENST00000532029 ATF3P18847 181 aa31.62■■■□□ 2.65
LRRK1-208ENST00000532029 NALCNQ8IZF0 1738 aa31.62■■■□□ 2.65
LRRK1-208ENST00000532029 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.61■■■□□ 2.65
LRRK1-208ENST00000532029 CADPS2Q86UW7 1296 aa31.6■■■□□ 2.65
LRRK1-208ENST00000532029 DCCP43146 1447 aa31.59■■■□□ 2.65
LRRK1-208ENST00000532029 EIF3AQ14152 1382 aaKnown RBP31.59■■■□□ 2.65
LRRK1-208ENST00000532029 CENPJQ9HC77 1338 aaPredicted RBP31.56■■■□□ 2.64
LRRK1-208ENST00000532029 MINK1Q8N4C8 1332 aaPredicted RBP31.53■■■□□ 2.64
LRRK1-208ENST00000532029 CDC42BPGQ6DT37 1551 aa31.53■■■□□ 2.64
LRRK1-208ENST00000532029 SCAF1Q9H7N4 1312 aaKnown RBP31.5■■■□□ 2.63
LRRK1-208ENST00000532029 PIP4K2BP78356 416 aa31.5■■■□□ 2.63
LRRK1-208ENST00000532029 HIRIP3Q9BW71 556 aaPredicted RBP31.5■■■□□ 2.63
LRRK1-208ENST00000532029 SLAIN2Q9P270 581 aa31.49■■■□□ 2.63
LRRK1-208ENST00000532029 ADGRB2O60241 1585 aa31.47■■■□□ 2.63
LRRK1-208ENST00000532029 QRICH2Q9H0J4 1663 aa31.46■■■□□ 2.63
LRRK1-208ENST00000532029 MST1RQ04912 1400 aa31.45■■■□□ 2.63
LRRK1-208ENST00000532029 USP47Q96K76 1375 aa31.44■■■□□ 2.62
LRRK1-208ENST00000532029 WASLO00401 505 aaPredicted RBP31.41■■■□□ 2.62
LRRK1-208ENST00000532029 FMN2Q9NZ56 1722 aa31.41■■■□□ 2.62
LRRK1-208ENST00000532029 NUTM2FA1L443 756 aa31.4■■■□□ 2.62
LRRK1-208ENST00000532029 C1orf167Q5SNV9 1468 aa31.4■■■□□ 2.62
LRRK1-208ENST00000532029 ST20-MTHFSA0A0A6YYL1 179 aa31.38■■■□□ 2.61
LRRK1-208ENST00000532029 SBNO2Q9Y2G9 1366 aa31.36■■■□□ 2.61
LRRK1-208ENST00000532029 CDK19Q9BWU1 502 aa31.35■■■□□ 2.61
LRRK1-208ENST00000532029 ROBO1Q9Y6N7 1651 aa31.35■■■□□ 2.61
LRRK1-208ENST00000532029 ANKARQ7Z5J8 1434 aa31.34■■■□□ 2.61
LRRK1-208ENST00000532029 EVC2Q86UK5 1308 aa31.34■■■□□ 2.61
LRRK1-208ENST00000532029 TULP4Q9NRJ4 1543 aa31.34■■■□□ 2.61
LRRK1-208ENST00000532029 EIF4G2P78344 907 aaKnown RBP eCLIP31.33■■■□□ 2.61
LRRK1-208ENST00000532029 ZEB1P37275 1124 aaPredicted RBP31.32■■■□□ 2.6
LRRK1-208ENST00000532029 ESCO1Q5FWF5 840 aa31.32■■■□□ 2.6
LRRK1-208ENST00000532029 BRINP3Q76B58 766 aa31.32■■■□□ 2.6
LRRK1-208ENST00000532029 SRPK2P78362 688 aaKnown RBP31.31■■■□□ 2.6
LRRK1-208ENST00000532029 SLC24A1O60721 1099 aa31.3■■■□□ 2.6
LRRK1-208ENST00000532029 ORAI2Q96SN7 254 aa31.3■■■□□ 2.6
LRRK1-208ENST00000532029 HSPA1LP34931 641 aa31.29■■■□□ 2.6
LRRK1-208ENST00000532029 NUDT16Q96DE0 195 aaKnown RBP31.27■■■□□ 2.6
LRRK1-208ENST00000532029 TESK2Q96S53 571 aa31.27■■■□□ 2.6
LRRK1-208ENST00000532029 USP32Q8NFA0 1604 aa31.27■■■□□ 2.6
LRRK1-208ENST00000532029 PRR36Q9H6K5 1346 aa31.26■■■□□ 2.6
LRRK1-208ENST00000532029 CABP2Q9NPB3 220 aa31.26■■■□□ 2.59
LRRK1-208ENST00000532029 HSPA5P11021 654 aaKnown RBP31.25■■■□□ 2.59
LRRK1-208ENST00000532029 ATP7BP35670 1465 aa31.24■■■□□ 2.59
LRRK1-208ENST00000532029 PHF8Q9UPP1 1060 aa31.23■■■□□ 2.59
LRRK1-208ENST00000532029 RGPD8O14715 1765 aaPredicted RBP31.22■■■□□ 2.59
LRRK1-208ENST00000532029 KIF1AQ12756 1690 aa31.22■■■□□ 2.59
LRRK1-208ENST00000532029 TMF1P82094 1093 aa31.21■■■□□ 2.59
LRRK1-208ENST00000532029 CCDC61Q9Y6R9 512 aa31.2■■■□□ 2.59
LRRK1-208ENST00000532029 ITSN1Q15811 1721 aa31.2■■■□□ 2.58
LRRK1-208ENST00000532029 AHDC1Q5TGY3 1603 aaPredicted RBP31.18■■■□□ 2.58
LRRK1-208ENST00000532029 PMFBP1Q8TBY8 1022 aa31.17■■■□□ 2.58
LRRK1-208ENST00000532029 ATAD2Q6PL18 1390 aa31.17■■■□□ 2.58
LRRK1-208ENST00000532029 FOXO3O43524 673 aa31.16■■■□□ 2.58
LRRK1-208ENST00000532029 NPHP3Q7Z494 1330 aa31.16■■■□□ 2.58
LRRK1-208ENST00000532029 NHSL1Q5SYE7 1610 aa31.16■■■□□ 2.58
LRRK1-208ENST00000532029 PHLPP1O60346 1717 aa31.15■■■□□ 2.58
LRRK1-208ENST00000532029 DDX17Q92841 729 aaKnown RBP31.15■■■□□ 2.58
LRRK1-208ENST00000532029 TOPAZ1Q8N9V7 1692 aa31.15■■■□□ 2.58
LRRK1-208ENST00000532029 PUS7Q96PZ0 661 aaKnown RBP31.14■■■□□ 2.58
LRRK1-208ENST00000532029 DISP3Q9P2K9 1392 aa31.14■■■□□ 2.58
LRRK1-208ENST00000532029 PPIP5K1Q6PFW1 1433 aa31.14■■■□□ 2.58
LRRK1-208ENST00000532029 CDCA8Q53HL2 280 aa31.13■■■□□ 2.57
LRRK1-208ENST00000532029 NGDNQ8NEJ9 315 aaKnown RBP31.13■■■□□ 2.57
LRRK1-208ENST00000532029 PLEKHG3A1L390 1219 aa31.1■■■□□ 2.57
LRRK1-208ENST00000532029 CABP1Q9NZU7 370 aa31.1■■■□□ 2.57
LRRK1-208ENST00000532029 PSME1Q06323 249 aa31.09■■■□□ 2.57
LRRK1-208ENST00000532029 COL16A1Q07092 1604 aaPredicted RBP31.08■■■□□ 2.57
LRRK1-208ENST00000532029 SOS2Q07890 1332 aaPredicted RBP31.07■■■□□ 2.56
LRRK1-208ENST00000532029 XPCQ01831 940 aaPredicted RBP31.07■■■□□ 2.56
LRRK1-208ENST00000532029 ACEP12821 1306 aa31.06■■■□□ 2.56
LRRK1-208ENST00000532029 KRT28Q7Z3Y7 464 aa31.06■■■□□ 2.56
LRRK1-208ENST00000532029 TMC1Q8TDI8 760 aa31.06■■■□□ 2.56
LRRK1-208ENST00000532029 PXDNQ92626 1479 aa31.05■■■□□ 2.56
LRRK1-208ENST00000532029 POLR3AO14802 1390 aaPredicted RBP31.05■■■□□ 2.56
LRRK1-208ENST00000532029 LRRC59Q96AG4 307 aaKnown RBP31.04■■■□□ 2.56
LRRK1-208ENST00000532029 NINLQ9Y2I6 1382 aa31.01■■■□□ 2.55
LRRK1-208ENST00000532029 POLR3GLQ9BT43 218 aa31■■■□□ 2.55
LRRK1-208ENST00000532029 JCADQ9P266 1359 aa30.98■■■□□ 2.55
LRRK1-208ENST00000532029 SLC12A5Q9H2X9 1139 aa30.98■■■□□ 2.55
LRRK1-208ENST00000532029 SBNO1A3KN83 1393 aa30.96■■■□□ 2.55
LRRK1-208ENST00000532029 ZNF692Q9BU19 519 aaPredicted RBP30.96■■■□□ 2.55
LRRK1-208ENST00000532029 HDGFL2Q7Z4V5 671 aaPredicted RBP30.95■■■□□ 2.55
LRRK1-208ENST00000532029 TERF2IPQ9NYB0 399 aa30.95■■■□□ 2.55
LRRK1-208ENST00000532029 PAK3O75914 559 aaPredicted RBP30.94■■■□□ 2.54
LRRK1-208ENST00000532029 SPATA31A3Q5VYP0 1347 aa30.94■■■□□ 2.54
LRRK1-208ENST00000532029 TNS3Q68CZ2 1445 aa30.93■■■□□ 2.54
LRRK1-208ENST00000532029 C11orf95C9JLR9 678 aaPredicted RBP30.92■■■□□ 2.54
LRRK1-208ENST00000532029 LMOD2Q6P5Q4 547 aa30.92■■■□□ 2.54
LRRK1-208ENST00000532029 BRD4O60885 1362 aaPredicted RBP30.92■■■□□ 2.54
LRRK1-208ENST00000532029 KTN1Q86UP2 1357 aaKnown RBP30.92■■■□□ 2.54
LRRK1-208ENST00000532029 USP6P35125 1406 aa30.91■■■□□ 2.54
LRRK1-208ENST00000532029 CPSF1Q10570 1443 aaKnown RBP30.91■■■□□ 2.54
LRRK1-208ENST00000532029 TRPM3Q9HCF6 1732 aaPredicted RBP30.91■■■□□ 2.54
LRRK1-208ENST00000532029 AKAP12Q02952 1782 aa30.9■■■□□ 2.54
LRRK1-208ENST00000532029 SHPRHQ149N8 1683 aa30.9■■■□□ 2.54
LRRK1-208ENST00000532029 PNPLA6Q8IY17 1366 aa30.9■■■□□ 2.54
LRRK1-208ENST00000532029 CD163L1Q9NR16 1453 aa30.89■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms