RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
VPS26B-206ENST00000531741 NSD2O96028 1365 aa22.02■■□□□ 1.12
VPS26B-206ENST00000531741 TULP4Q9NRJ4 1543 aa22.02■■□□□ 1.12
VPS26B-206ENST00000531741 TMEM132EQ6IEE7 984 aa22.02■■□□□ 1.11
VPS26B-206ENST00000531741 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.11
VPS26B-206ENST00000531741 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
VPS26B-206ENST00000531741 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
VPS26B-206ENST00000531741 EVC2Q86UK5 1308 aa22.01■■□□□ 1.11
VPS26B-206ENST00000531741 SPINK5Q9NQ38 1064 aaPredicted RBP22■■□□□ 1.11
VPS26B-206ENST00000531741 CGNL1Q0VF96 1302 aa22■■□□□ 1.11
VPS26B-206ENST00000531741 ANKRD36BQ8N2N9 1353 aa22■■□□□ 1.11
VPS26B-206ENST00000531741 ZBTB47Q9UFB7 747 aaPredicted RBP21.99■■□□□ 1.11
VPS26B-206ENST00000531741 IQSEC2Q5JU85 1478 aa21.98■■□□□ 1.11
VPS26B-206ENST00000531741 NINLQ9Y2I6 1382 aa21.98■■□□□ 1.11
VPS26B-206ENST00000531741 NCBP3Q53F19 620 aaKnown RBP21.97■■□□□ 1.11
VPS26B-206ENST00000531741 PREX1Q8TCU6 1659 aa21.96■■□□□ 1.11
VPS26B-206ENST00000531741 WWC1Q8IX03 1113 aa21.96■■□□□ 1.11
VPS26B-206ENST00000531741 TMEM131LA2VDJ0 1609 aa21.96■■□□□ 1.11
VPS26B-206ENST00000531741 IDI1Q13907 227 aa21.95■■□□□ 1.1
VPS26B-206ENST00000531741 RUNDC1Q96C34 613 aa21.95■■□□□ 1.1
VPS26B-206ENST00000531741 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
VPS26B-206ENST00000531741 YEATS2Q9ULM3 1422 aa21.94■■□□□ 1.1
VPS26B-206ENST00000531741 DMRT2Q9Y5R5 561 aa21.92■■□□□ 1.1
VPS26B-206ENST00000531741 PDE3AQ14432 1141 aa21.92■■□□□ 1.1
VPS26B-206ENST00000531741 CFAP53Q96M91 514 aa21.92■■□□□ 1.1
VPS26B-206ENST00000531741 CCDC27Q2M243 656 aa21.91■■□□□ 1.1
VPS26B-206ENST00000531741 MYO5BQ9ULV0 1848 aa21.91■■□□□ 1.1
VPS26B-206ENST00000531741 CLTCQ00610 1675 aaKnown RBP21.9■■□□□ 1.1
VPS26B-206ENST00000531741 MTHFSP49914 203 aa21.89■■□□□ 1.1
VPS26B-206ENST00000531741 WDR63Q8IWG1 891 aa21.89■■□□□ 1.1
VPS26B-206ENST00000531741 BCAR3O75815 825 aa21.89■■□□□ 1.09
VPS26B-206ENST00000531741 ABCC11Q96J66 1382 aa21.88■■□□□ 1.09
VPS26B-206ENST00000531741 PTPRMP28827 1452 aa21.88■■□□□ 1.09
VPS26B-206ENST00000531741 REREQ9P2R6 1566 aa21.87■■□□□ 1.09
VPS26B-206ENST00000531741 TCP11L2Q8N4U5 519 aa21.86■■□□□ 1.09
VPS26B-206ENST00000531741 ADGRB2O60241 1585 aa21.86■■□□□ 1.09
VPS26B-206ENST00000531741 MED14O60244 1454 aa21.86■■□□□ 1.09
VPS26B-206ENST00000531741 ATAD2Q6PL18 1390 aa21.86■■□□□ 1.09
VPS26B-206ENST00000531741 NUTM2DQ5VT03 806 aaPredicted RBP21.86■■□□□ 1.09
VPS26B-206ENST00000531741 TNNT2P45379 298 aaPredicted RBP21.85■■□□□ 1.09
VPS26B-206ENST00000531741 ANKRD26Q9UPS8 1709 aa21.85■■□□□ 1.09
VPS26B-206ENST00000531741 AAMPQ13685 434 aa21.84■■□□□ 1.09
VPS26B-206ENST00000531741 NPM2Q86SE8 214 aaKnown RBP21.84■■□□□ 1.09
VPS26B-206ENST00000531741 A0A1W2PP64 1363 aa21.83■■□□□ 1.09
VPS26B-206ENST00000531741 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
VPS26B-206ENST00000531741 YTHDC2Q9H6S0 1430 aaKnown RBP21.83■■□□□ 1.08
VPS26B-206ENST00000531741 SKAP1Q86WV1 359 aa21.83■■□□□ 1.08
VPS26B-206ENST00000531741 DDRGK1Q96HY6 314 aa21.83■■□□□ 1.08
VPS26B-206ENST00000531741 AGLP35573 1532 aa21.82■■□□□ 1.08
VPS26B-206ENST00000531741 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
VPS26B-206ENST00000531741 PPP6R1Q9UPN7 881 aa21.81■■□□□ 1.08
VPS26B-206ENST00000531741 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
VPS26B-206ENST00000531741 RARSP54136 660 aaKnown RBP21.79■■□□□ 1.08
VPS26B-206ENST00000531741 COL3A1P02461 1466 aaPredicted RBP21.78■■□□□ 1.08
VPS26B-206ENST00000531741 CD163L1Q9NR16 1453 aa21.78■■□□□ 1.08
VPS26B-206ENST00000531741 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
VPS26B-206ENST00000531741 C8orf34Q49A92 452 aa21.78■■□□□ 1.08
VPS26B-206ENST00000531741 TERF2IPQ9NYB0 399 aa21.78■■□□□ 1.08
VPS26B-206ENST00000531741 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
VPS26B-206ENST00000531741 SRPK2P78362 688 aaKnown RBP21.77■■□□□ 1.08
VPS26B-206ENST00000531741 CLUAP1Q96AJ1 413 aa21.77■■□□□ 1.08
VPS26B-206ENST00000531741 RRP7AQ9Y3A4 280 aaKnown RBP21.76■■□□□ 1.07
VPS26B-206ENST00000531741 NBR1Q14596 966 aa21.76■■□□□ 1.07
VPS26B-206ENST00000531741 NEUROD2Q15784 382 aa21.76■■□□□ 1.07
VPS26B-206ENST00000531741 MYH16Q9H6N6 1097 aa21.76■■□□□ 1.07
VPS26B-206ENST00000531741 ARHGEF40Q8TER5 1519 aa21.76■■□□□ 1.07
VPS26B-206ENST00000531741 DLC1Q96QB1 1528 aa21.76■■□□□ 1.07
VPS26B-206ENST00000531741 STK26Q9P289 416 aa21.75■■□□□ 1.07
VPS26B-206ENST00000531741 CT47B1P0C2W7 299 aaPredicted RBP21.75■■□□□ 1.07
VPS26B-206ENST00000531741 U2AF1L5P0DN76 240 aaPredicted RBP21.75■■□□□ 1.07
VPS26B-206ENST00000531741 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
VPS26B-206ENST00000531741 U2AF1Q01081 240 aaKnown RBP eCLIP21.75■■□□□ 1.07
VPS26B-206ENST00000531741 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
VPS26B-206ENST00000531741 SAFB2Q14151 953 aaKnown RBP eCLIP21.74■■□□□ 1.07
VPS26B-206ENST00000531741 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
VPS26B-206ENST00000531741 SPATA31D1Q6ZQQ2 1576 aa21.73■■□□□ 1.07
VPS26B-206ENST00000531741 POGKQ9P215 609 aa21.72■■□□□ 1.07
VPS26B-206ENST00000531741 IGHDP01880 384 aa21.71■■□□□ 1.07
VPS26B-206ENST00000531741 PANK1Q8TE04 598 aa21.71■■□□□ 1.07
VPS26B-206ENST00000531741 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
VPS26B-206ENST00000531741 FYB1O15117 783 aa21.71■■□□□ 1.07
VPS26B-206ENST00000531741 FBXO31Q5XUX0 539 aaPredicted RBP21.71■■□□□ 1.07
VPS26B-206ENST00000531741 COG6Q9Y2V7 657 aa21.71■■□□□ 1.07
VPS26B-206ENST00000531741 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.07
VPS26B-206ENST00000531741 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.06
VPS26B-206ENST00000531741 MINK1Q8N4C8 1332 aaPredicted RBP21.7■■□□□ 1.06
VPS26B-206ENST00000531741 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
VPS26B-206ENST00000531741 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
VPS26B-206ENST00000531741 DEKP35659 375 aaKnown RBP21.7■■□□□ 1.06
VPS26B-206ENST00000531741 USP35Q9P2H5 1018 aa21.7■■□□□ 1.06
VPS26B-206ENST00000531741 SETD1AO15047 1707 aaKnown RBP21.7■■□□□ 1.06
VPS26B-206ENST00000531741 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
VPS26B-206ENST00000531741 A2ML1A8K2U0 1454 aa21.69■■□□□ 1.06
VPS26B-206ENST00000531741 PPM1GO15355 546 aaPredicted RBP21.68■■□□□ 1.06
VPS26B-206ENST00000531741 HDGFL2Q7Z4V5 671 aaPredicted RBP21.68■■□□□ 1.06
VPS26B-206ENST00000531741 GGNBP2Q9H3C7 697 aa21.68■■□□□ 1.06
VPS26B-206ENST00000531741 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
VPS26B-206ENST00000531741 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
VPS26B-206ENST00000531741 PMFBP1Q8TBY8 1022 aa21.68■■□□□ 1.06
VPS26B-206ENST00000531741 RGS3P49796 1198 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms