RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 RALGAPBQ86X10 1494 aa17.63■□□□□ 0.41
PSMC3-211ENST00000531653 PXDNQ92626 1479 aa17.63■□□□□ 0.41
PSMC3-211ENST00000531653 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
PSMC3-211ENST00000531653 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
PSMC3-211ENST00000531653 HRCP23327 699 aa17.59■□□□□ 0.41
PSMC3-211ENST00000531653 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
PSMC3-211ENST00000531653 NPHP3Q7Z494 1330 aa17.56■□□□□ 0.4
PSMC3-211ENST00000531653 ONECUT3O60422 494 aaPredicted RBP17.56■□□□□ 0.4
PSMC3-211ENST00000531653 CDC42BPGQ6DT37 1551 aa17.56■□□□□ 0.4
PSMC3-211ENST00000531653 USP32Q8NFA0 1604 aa17.53■□□□□ 0.4
PSMC3-211ENST00000531653 HFM1A2PYH4 1435 aa17.53■□□□□ 0.4
PSMC3-211ENST00000531653 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
PSMC3-211ENST00000531653 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
PSMC3-211ENST00000531653 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.39
PSMC3-211ENST00000531653 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
PSMC3-211ENST00000531653 NUP155O75694 1391 aa17.51■□□□□ 0.39
PSMC3-211ENST00000531653 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
PSMC3-211ENST00000531653 PSDA5PKW4 1024 aaPredicted RBP17.5■□□□□ 0.39
PSMC3-211ENST00000531653 VPS72Q15906 364 aa17.49■□□□□ 0.39
PSMC3-211ENST00000531653 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
PSMC3-211ENST00000531653 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
PSMC3-211ENST00000531653 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
PSMC3-211ENST00000531653 SPATA31A3Q5VYP0 1347 aa17.47■□□□□ 0.39
PSMC3-211ENST00000531653 FOXO3O43524 673 aa17.46■□□□□ 0.39
PSMC3-211ENST00000531653 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
PSMC3-211ENST00000531653 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
PSMC3-211ENST00000531653 KRT27Q7Z3Y8 459 aa17.46■□□□□ 0.39
PSMC3-211ENST00000531653 KIF1BO60333 1816 aa17.46■□□□□ 0.39
PSMC3-211ENST00000531653 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
PSMC3-211ENST00000531653 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
PSMC3-211ENST00000531653 BAG6P46379 1132 aa17.45■□□□□ 0.38
PSMC3-211ENST00000531653 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
PSMC3-211ENST00000531653 ABCA3Q99758 1704 aa17.44■□□□□ 0.38
PSMC3-211ENST00000531653 APLP2Q06481 763 aa17.43■□□□□ 0.38
PSMC3-211ENST00000531653 TNS1Q9HBL0 1735 aaKnown RBP17.43■□□□□ 0.38
PSMC3-211ENST00000531653 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
PSMC3-211ENST00000531653 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
PSMC3-211ENST00000531653 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
PSMC3-211ENST00000531653 TECPR2O15040 1411 aa17.4■□□□□ 0.38
PSMC3-211ENST00000531653 NAIPQ13075 1403 aa17.4■□□□□ 0.38
PSMC3-211ENST00000531653 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
PSMC3-211ENST00000531653 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.38
PSMC3-211ENST00000531653 PPLO60437 1756 aa17.39■□□□□ 0.37
PSMC3-211ENST00000531653 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
PSMC3-211ENST00000531653 YY1P25490 414 aa17.39■□□□□ 0.37
PSMC3-211ENST00000531653 R3HDM1Q15032 1099 aaKnown RBP17.39■□□□□ 0.37
PSMC3-211ENST00000531653 EN1Q05925 392 aaPredicted RBP17.38■□□□□ 0.37
PSMC3-211ENST00000531653 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
PSMC3-211ENST00000531653 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
PSMC3-211ENST00000531653 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
PSMC3-211ENST00000531653 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
PSMC3-211ENST00000531653 RREB1Q92766 1687 aa17.32■□□□□ 0.36
PSMC3-211ENST00000531653 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
PSMC3-211ENST00000531653 CAMKK2Q96RR4 588 aa17.32■□□□□ 0.36
PSMC3-211ENST00000531653 RGPD8O14715 1765 aaPredicted RBP17.32■□□□□ 0.36
PSMC3-211ENST00000531653 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
PSMC3-211ENST00000531653 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
PSMC3-211ENST00000531653 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
PSMC3-211ENST00000531653 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
PSMC3-211ENST00000531653 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
PSMC3-211ENST00000531653 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
PSMC3-211ENST00000531653 NUTM2FA1L443 756 aa17.29■□□□□ 0.36
PSMC3-211ENST00000531653 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
PSMC3-211ENST00000531653 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
PSMC3-211ENST00000531653 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
PSMC3-211ENST00000531653 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
PSMC3-211ENST00000531653 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
PSMC3-211ENST00000531653 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
PSMC3-211ENST00000531653 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
PSMC3-211ENST00000531653 NUP188Q5SRE5 1749 aa17.28■□□□□ 0.36
PSMC3-211ENST00000531653 IFT172Q9UG01 1749 aa17.28■□□□□ 0.36
PSMC3-211ENST00000531653 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
PSMC3-211ENST00000531653 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
PSMC3-211ENST00000531653 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
PSMC3-211ENST00000531653 TRPM3Q9HCF6 1732 aaPredicted RBP17.25■□□□□ 0.35
PSMC3-211ENST00000531653 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
PSMC3-211ENST00000531653 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
PSMC3-211ENST00000531653 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
PSMC3-211ENST00000531653 PSME1Q06323 249 aa17.24■□□□□ 0.35
PSMC3-211ENST00000531653 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
PSMC3-211ENST00000531653 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
PSMC3-211ENST00000531653 PHF8Q9UPP1 1060 aa17.23■□□□□ 0.35
PSMC3-211ENST00000531653 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
PSMC3-211ENST00000531653 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
PSMC3-211ENST00000531653 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
PSMC3-211ENST00000531653 A0A0G2JS52 829 aa17.21■□□□□ 0.35
PSMC3-211ENST00000531653 MYT1Q01538 1121 aa17.21■□□□□ 0.35
PSMC3-211ENST00000531653 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
PSMC3-211ENST00000531653 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
PSMC3-211ENST00000531653 UTRNP46939 3433 aa17.2■□□□□ 0.34
PSMC3-211ENST00000531653 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
PSMC3-211ENST00000531653 STK26Q9P289 416 aa17.18■□□□□ 0.34
PSMC3-211ENST00000531653 YTHDC2Q9H6S0 1430 aaKnown RBP17.18■□□□□ 0.34
PSMC3-211ENST00000531653 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
PSMC3-211ENST00000531653 TRIM37O94972 964 aa17.17■□□□□ 0.34
PSMC3-211ENST00000531653 IFFO2Q5TF58 517 aa17.17■□□□□ 0.34
PSMC3-211ENST00000531653 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
PSMC3-211ENST00000531653 SPATA31E1Q6ZUB1 1445 aa17.15■□□□□ 0.34
PSMC3-211ENST00000531653 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
PSMC3-211ENST00000531653 KCNQ2O43526 872 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms