RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 NUTM2AQ8IVF1 878 aaPredicted RBP19.76■□□□□ 0.75
AMBRA1-210ENST00000531542 IFT172Q9UG01 1749 aa19.75■□□□□ 0.75
AMBRA1-210ENST00000531542 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
AMBRA1-210ENST00000531542 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
AMBRA1-210ENST00000531542 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
AMBRA1-210ENST00000531542 HRCP23327 699 aa19.73■□□□□ 0.75
AMBRA1-210ENST00000531542 RXRBP28702 533 aa19.73■□□□□ 0.75
AMBRA1-210ENST00000531542 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
AMBRA1-210ENST00000531542 MYOM2P54296 1465 aa19.72■□□□□ 0.75
AMBRA1-210ENST00000531542 AFF2P51816 1311 aa19.72■□□□□ 0.75
AMBRA1-210ENST00000531542 NPHP3Q7Z494 1330 aa19.72■□□□□ 0.75
AMBRA1-210ENST00000531542 YTHDC2Q9H6S0 1430 aaKnown RBP19.71■□□□□ 0.75
AMBRA1-210ENST00000531542 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
AMBRA1-210ENST00000531542 STK26Q9P289 416 aa19.71■□□□□ 0.75
AMBRA1-210ENST00000531542 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
AMBRA1-210ENST00000531542 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
AMBRA1-210ENST00000531542 KNDC1Q76NI1 1749 aa19.68■□□□□ 0.74
AMBRA1-210ENST00000531542 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
AMBRA1-210ENST00000531542 C8orf37Q96NL8 207 aa19.67■□□□□ 0.74
AMBRA1-210ENST00000531542 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
AMBRA1-210ENST00000531542 PLEKHH1Q9ULM0 1364 aa19.67■□□□□ 0.74
AMBRA1-210ENST00000531542 PXDNQ92626 1479 aa19.66■□□□□ 0.74
AMBRA1-210ENST00000531542 RBM6P78332 1123 aaKnown RBP19.65■□□□□ 0.74
AMBRA1-210ENST00000531542 QTRT2Q9H974 415 aaKnown RBP19.65■□□□□ 0.74
AMBRA1-210ENST00000531542 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
AMBRA1-210ENST00000531542 FOXO3O43524 673 aa19.64■□□□□ 0.73
AMBRA1-210ENST00000531542 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
AMBRA1-210ENST00000531542 FNBP4Q8N3X1 1017 aaPredicted RBP19.64■□□□□ 0.73
AMBRA1-210ENST00000531542 NGLY1Q96IV0 654 aa19.64■□□□□ 0.73
AMBRA1-210ENST00000531542 ADAMTS2O95450 1211 aa19.62■□□□□ 0.73
AMBRA1-210ENST00000531542 UPF1Q92900 1129 aaKnown RBP eCLIP19.62■□□□□ 0.73
AMBRA1-210ENST00000531542 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
AMBRA1-210ENST00000531542 USP21Q9UK80 565 aa19.58■□□□□ 0.72
AMBRA1-210ENST00000531542 TRPC5Q9UL62 973 aaPredicted RBP19.58■□□□□ 0.72
AMBRA1-210ENST00000531542 FMN2Q9NZ56 1722 aa19.58■□□□□ 0.72
AMBRA1-210ENST00000531542 SPATA31A3Q5VYP0 1347 aa19.57■□□□□ 0.72
AMBRA1-210ENST00000531542 NUTM2FA1L443 756 aa19.57■□□□□ 0.72
AMBRA1-210ENST00000531542 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
AMBRA1-210ENST00000531542 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
AMBRA1-210ENST00000531542 RGS12O14924 1447 aa19.56■□□□□ 0.72
AMBRA1-210ENST00000531542 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
AMBRA1-210ENST00000531542 XPCQ01831 940 aaPredicted RBP19.55■□□□□ 0.72
AMBRA1-210ENST00000531542 PHF8Q9UPP1 1060 aa19.55■□□□□ 0.72
AMBRA1-210ENST00000531542 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
AMBRA1-210ENST00000531542 KRT28Q7Z3Y7 464 aa19.54■□□□□ 0.72
AMBRA1-210ENST00000531542 ATRNO75882 1429 aa19.53■□□□□ 0.72
AMBRA1-210ENST00000531542 PSME1Q06323 249 aa19.53■□□□□ 0.72
AMBRA1-210ENST00000531542 DCAF11Q8TEB1 546 aa19.53■□□□□ 0.72
AMBRA1-210ENST00000531542 POGKQ9P215 609 aa19.53■□□□□ 0.72
AMBRA1-210ENST00000531542 BCL9LQ86UU0 1499 aa19.53■□□□□ 0.72
AMBRA1-210ENST00000531542 SBNO1A3KN83 1393 aa19.52■□□□□ 0.72
AMBRA1-210ENST00000531542 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
AMBRA1-210ENST00000531542 EIF3AQ14152 1382 aaKnown RBP19.49■□□□□ 0.71
AMBRA1-210ENST00000531542 TRAK1Q9UPV9 953 aa19.49■□□□□ 0.71
AMBRA1-210ENST00000531542 KDM2AQ9Y2K7 1162 aa19.49■□□□□ 0.71
AMBRA1-210ENST00000531542 TNS3Q68CZ2 1445 aa19.49■□□□□ 0.71
AMBRA1-210ENST00000531542 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
AMBRA1-210ENST00000531542 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
AMBRA1-210ENST00000531542 SLIT2O94813 1529 aa19.46■□□□□ 0.71
AMBRA1-210ENST00000531542 UNC5CLQ8IV45 518 aa19.46■□□□□ 0.71
AMBRA1-210ENST00000531542 GJD4Q96KN9 370 aaPredicted RBP19.46■□□□□ 0.71
AMBRA1-210ENST00000531542 ATAD2Q6PL18 1390 aa19.45■□□□□ 0.7
AMBRA1-210ENST00000531542 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
AMBRA1-210ENST00000531542 MARF1Q9Y4F3 1742 aaKnown RBP19.45■□□□□ 0.7
AMBRA1-210ENST00000531542 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
AMBRA1-210ENST00000531542 TULP4Q9NRJ4 1543 aa19.42■□□□□ 0.7
AMBRA1-210ENST00000531542 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
AMBRA1-210ENST00000531542 HIRIP3Q9BW71 556 aaPredicted RBP19.41■□□□□ 0.7
AMBRA1-210ENST00000531542 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.41■□□□□ 0.7
AMBRA1-210ENST00000531542 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
AMBRA1-210ENST00000531542 PRR36Q9H6K5 1346 aa19.41■□□□□ 0.7
AMBRA1-210ENST00000531542 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
AMBRA1-210ENST00000531542 CCDC125Q86Z20 511 aa19.4■□□□□ 0.7
AMBRA1-210ENST00000531542 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
AMBRA1-210ENST00000531542 HAP1P54257 671 aaPredicted RBP19.38■□□□□ 0.69
AMBRA1-210ENST00000531542 VPS72Q15906 364 aa19.38■□□□□ 0.69
AMBRA1-210ENST00000531542 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
AMBRA1-210ENST00000531542 RALGAPBQ86X10 1494 aa19.37■□□□□ 0.69
AMBRA1-210ENST00000531542 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
AMBRA1-210ENST00000531542 LMOD2Q6P5Q4 547 aa19.35■□□□□ 0.69
AMBRA1-210ENST00000531542 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
AMBRA1-210ENST00000531542 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
AMBRA1-210ENST00000531542 NGDNQ8NEJ9 315 aaKnown RBP19.34■□□□□ 0.69
AMBRA1-210ENST00000531542 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
AMBRA1-210ENST00000531542 GLI3P10071 1580 aa19.34■□□□□ 0.69
AMBRA1-210ENST00000531542 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
AMBRA1-210ENST00000531542 ATP7BP35670 1465 aa19.33■□□□□ 0.68
AMBRA1-210ENST00000531542 ARHGEF28Q8N1W1 1705 aaKnown RBP19.32■□□□□ 0.68
AMBRA1-210ENST00000531542 NWD2Q9ULI1 1742 aa19.32■□□□□ 0.68
AMBRA1-210ENST00000531542 ALS2Q96Q42 1657 aa19.31■□□□□ 0.68
AMBRA1-210ENST00000531542 CDK19Q9BWU1 502 aa19.31■□□□□ 0.68
AMBRA1-210ENST00000531542 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
AMBRA1-210ENST00000531542 POLR3AO14802 1390 aaPredicted RBP19.31■□□□□ 0.68
AMBRA1-210ENST00000531542 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
AMBRA1-210ENST00000531542 ABCA3Q99758 1704 aa19.3■□□□□ 0.68
AMBRA1-210ENST00000531542 EP400Q96L91 3159 aa19.3■□□□□ 0.68
AMBRA1-210ENST00000531542 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
AMBRA1-210ENST00000531542 SEPT12Q8IYM1 358 aa19.28■□□□□ 0.68
AMBRA1-210ENST00000531542 PLCH1Q4KWH8 1693 aa19.27■□□□□ 0.67
AMBRA1-210ENST00000531542 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms