RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ESCO1Q5FWF5 840 aa19.05■□□□□ 0.64
TM9SF1-211ENST00000531406 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
TM9SF1-211ENST00000531406 WAPLQ7Z5K2 1190 aa19.05■□□□□ 0.64
TM9SF1-211ENST00000531406 UPF1Q92900 1129 aaKnown RBP eCLIP19.05■□□□□ 0.64
TM9SF1-211ENST00000531406 QTRT2Q9H974 415 aaKnown RBP19.05■□□□□ 0.64
TM9SF1-211ENST00000531406 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
TM9SF1-211ENST00000531406 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
TM9SF1-211ENST00000531406 TECPR2O15040 1411 aa19.04■□□□□ 0.64
TM9SF1-211ENST00000531406 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
TM9SF1-211ENST00000531406 ABCC11Q96J66 1382 aa19.04■□□□□ 0.64
TM9SF1-211ENST00000531406 RBM6P78332 1123 aaKnown RBP19.02■□□□□ 0.64
TM9SF1-211ENST00000531406 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.63
TM9SF1-211ENST00000531406 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
TM9SF1-211ENST00000531406 PIK3C2GO75747 1445 aa19.01■□□□□ 0.63
TM9SF1-211ENST00000531406 PLEKHH1Q9ULM0 1364 aa19■□□□□ 0.63
TM9SF1-211ENST00000531406 NUTM2FA1L443 756 aa18.99■□□□□ 0.63
TM9SF1-211ENST00000531406 FOXO3O43524 673 aa18.99■□□□□ 0.63
TM9SF1-211ENST00000531406 C14orf93Q9H972 538 aaKnown RBP18.99■□□□□ 0.63
TM9SF1-211ENST00000531406 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
TM9SF1-211ENST00000531406 SIRT1Q96EB6 747 aa18.98■□□□□ 0.63
TM9SF1-211ENST00000531406 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-211ENST00000531406 RGS12O14924 1447 aa18.97■□□□□ 0.63
TM9SF1-211ENST00000531406 IFT172Q9UG01 1749 aa18.97■□□□□ 0.63
TM9SF1-211ENST00000531406 PXDNQ92626 1479 aa18.97■□□□□ 0.63
TM9SF1-211ENST00000531406 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
TM9SF1-211ENST00000531406 USP21Q9UK80 565 aa18.96■□□□□ 0.63
TM9SF1-211ENST00000531406 CFAP70Q5T0N1 1121 aa18.95■□□□□ 0.62
TM9SF1-211ENST00000531406 MYOM2P54296 1465 aa18.94■□□□□ 0.62
TM9SF1-211ENST00000531406 NRXN1Q9ULB1 1477 aa18.94■□□□□ 0.62
TM9SF1-211ENST00000531406 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
TM9SF1-211ENST00000531406 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
TM9SF1-211ENST00000531406 DHX57Q6P158 1386 aaKnown RBP18.93■□□□□ 0.62
TM9SF1-211ENST00000531406 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
TM9SF1-211ENST00000531406 KNDC1Q76NI1 1749 aa18.91■□□□□ 0.62
TM9SF1-211ENST00000531406 ATRNO75882 1429 aa18.9■□□□□ 0.62
TM9SF1-211ENST00000531406 KRT28Q7Z3Y7 464 aa18.89■□□□□ 0.61
TM9SF1-211ENST00000531406 PRAM1Q96QH2 718 aa18.89■□□□□ 0.61
TM9SF1-211ENST00000531406 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
TM9SF1-211ENST00000531406 SAFB2Q14151 953 aaKnown RBP eCLIP18.87■□□□□ 0.61
TM9SF1-211ENST00000531406 BCL9LQ86UU0 1499 aa18.87■□□□□ 0.61
TM9SF1-211ENST00000531406 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
TM9SF1-211ENST00000531406 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
TM9SF1-211ENST00000531406 POGKQ9P215 609 aa18.85■□□□□ 0.61
TM9SF1-211ENST00000531406 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
TM9SF1-211ENST00000531406 PSME1Q06323 249 aa18.84■□□□□ 0.61
TM9SF1-211ENST00000531406 KIF1AQ12756 1690 aa18.82■□□□□ 0.6
TM9SF1-211ENST00000531406 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
TM9SF1-211ENST00000531406 KDM2AQ9Y2K7 1162 aa18.82■□□□□ 0.6
TM9SF1-211ENST00000531406 DLC1Q96QB1 1528 aa18.81■□□□□ 0.6
TM9SF1-211ENST00000531406 HRCP23327 699 aa18.81■□□□□ 0.6
TM9SF1-211ENST00000531406 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
TM9SF1-211ENST00000531406 DCAF11Q8TEB1 546 aa18.81■□□□□ 0.6
TM9SF1-211ENST00000531406 TRAK1Q9UPV9 953 aa18.81■□□□□ 0.6
TM9SF1-211ENST00000531406 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
TM9SF1-211ENST00000531406 ADGRB1O14514 1584 aa18.8■□□□□ 0.6
TM9SF1-211ENST00000531406 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
TM9SF1-211ENST00000531406 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
TM9SF1-211ENST00000531406 ANKARQ7Z5J8 1434 aa18.79■□□□□ 0.6
TM9SF1-211ENST00000531406 SBNO1A3KN83 1393 aa18.79■□□□□ 0.6
TM9SF1-211ENST00000531406 SLIT2O94813 1529 aa18.79■□□□□ 0.6
TM9SF1-211ENST00000531406 HAP1P54257 671 aaPredicted RBP18.78■□□□□ 0.6
TM9SF1-211ENST00000531406 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
TM9SF1-211ENST00000531406 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
TM9SF1-211ENST00000531406 LMOD2Q6P5Q4 547 aa18.77■□□□□ 0.6
TM9SF1-211ENST00000531406 MINK1Q8N4C8 1332 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-211ENST00000531406 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
TM9SF1-211ENST00000531406 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
TM9SF1-211ENST00000531406 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
TM9SF1-211ENST00000531406 ADGRB2O60241 1585 aa18.74■□□□□ 0.59
TM9SF1-211ENST00000531406 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
TM9SF1-211ENST00000531406 USP32Q8NFA0 1604 aa18.74■□□□□ 0.59
TM9SF1-211ENST00000531406 PRR36Q9H6K5 1346 aa18.74■□□□□ 0.59
TM9SF1-211ENST00000531406 WASLO00401 505 aaPredicted RBP18.73■□□□□ 0.59
TM9SF1-211ENST00000531406 EIF3AQ14152 1382 aaKnown RBP18.72■□□□□ 0.59
TM9SF1-211ENST00000531406 VPS72Q15906 364 aa18.72■□□□□ 0.59
TM9SF1-211ENST00000531406 CCDC125Q86Z20 511 aa18.72■□□□□ 0.59
TM9SF1-211ENST00000531406 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
TM9SF1-211ENST00000531406 GPRASP1Q5JY77 1395 aa18.7■□□□□ 0.58
TM9SF1-211ENST00000531406 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
TM9SF1-211ENST00000531406 GLI3P10071 1580 aa18.7■□□□□ 0.58
TM9SF1-211ENST00000531406 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
TM9SF1-211ENST00000531406 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
TM9SF1-211ENST00000531406 SEPT12Q8IYM1 358 aa18.68■□□□□ 0.58
TM9SF1-211ENST00000531406 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
TM9SF1-211ENST00000531406 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
TM9SF1-211ENST00000531406 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
TM9SF1-211ENST00000531406 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
TM9SF1-211ENST00000531406 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
TM9SF1-211ENST00000531406 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
TM9SF1-211ENST00000531406 BTG4Q9NY30 223 aa18.63■□□□□ 0.57
TM9SF1-211ENST00000531406 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
TM9SF1-211ENST00000531406 EP400Q96L91 3159 aa18.63■□□□□ 0.57
TM9SF1-211ENST00000531406 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
TM9SF1-211ENST00000531406 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-211ENST00000531406 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
TM9SF1-211ENST00000531406 NWD2Q9ULI1 1742 aa18.61■□□□□ 0.57
TM9SF1-211ENST00000531406 PLCH1Q4KWH8 1693 aa18.61■□□□□ 0.57
TM9SF1-211ENST00000531406 ATP7BP35670 1465 aa18.61■□□□□ 0.57
TM9SF1-211ENST00000531406 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
TM9SF1-211ENST00000531406 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms