RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 QRICH2Q9H0J4 1663 aa19.7■□□□□ 0.74
SMPD1-206ENST00000531336 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
SMPD1-206ENST00000531336 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
SMPD1-206ENST00000531336 DCCP43146 1447 aa19.68■□□□□ 0.74
SMPD1-206ENST00000531336 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
SMPD1-206ENST00000531336 ADGRB2O60241 1585 aa19.67■□□□□ 0.74
SMPD1-206ENST00000531336 CARD11Q9BXL7 1154 aa19.67■□□□□ 0.74
SMPD1-206ENST00000531336 TOM1O60784 492 aa19.66■□□□□ 0.74
SMPD1-206ENST00000531336 ATF3P18847 181 aa19.66■□□□□ 0.74
SMPD1-206ENST00000531336 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
SMPD1-206ENST00000531336 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
SMPD1-206ENST00000531336 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
SMPD1-206ENST00000531336 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
SMPD1-206ENST00000531336 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-206ENST00000531336 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
SMPD1-206ENST00000531336 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
SMPD1-206ENST00000531336 ROBO1Q9Y6N7 1651 aa19.62■□□□□ 0.73
SMPD1-206ENST00000531336 CENPJQ9HC77 1338 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-206ENST00000531336 MST1RQ04912 1400 aa19.61■□□□□ 0.73
SMPD1-206ENST00000531336 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-206ENST00000531336 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-206ENST00000531336 SLAIN2Q9P270 581 aa19.58■□□□□ 0.72
SMPD1-206ENST00000531336 USP47Q96K76 1375 aa19.57■□□□□ 0.72
SMPD1-206ENST00000531336 C1orf167Q5SNV9 1468 aa19.57■□□□□ 0.72
SMPD1-206ENST00000531336 USP32Q8NFA0 1604 aa19.56■□□□□ 0.72
SMPD1-206ENST00000531336 NUTM2FA1L443 756 aa19.56■□□□□ 0.72
SMPD1-206ENST00000531336 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
SMPD1-206ENST00000531336 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
SMPD1-206ENST00000531336 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-206ENST00000531336 KIF1AQ12756 1690 aa19.52■□□□□ 0.71
SMPD1-206ENST00000531336 ANKARQ7Z5J8 1434 aa19.51■□□□□ 0.71
SMPD1-206ENST00000531336 NHSL1Q5SYE7 1610 aa19.51■□□□□ 0.71
SMPD1-206ENST00000531336 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
SMPD1-206ENST00000531336 TOPAZ1Q8N9V7 1692 aa19.51■□□□□ 0.71
SMPD1-206ENST00000531336 SBNO2Q9Y2G9 1366 aa19.5■□□□□ 0.71
SMPD1-206ENST00000531336 ST20-MTHFSA0A0A6YYL1 179 aa19.5■□□□□ 0.71
SMPD1-206ENST00000531336 BRINP3Q76B58 766 aa19.5■□□□□ 0.71
SMPD1-206ENST00000531336 ATP7BP35670 1465 aa19.49■□□□□ 0.71
SMPD1-206ENST00000531336 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
SMPD1-206ENST00000531336 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
SMPD1-206ENST00000531336 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
SMPD1-206ENST00000531336 ESCO1Q5FWF5 840 aa19.48■□□□□ 0.71
SMPD1-206ENST00000531336 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
SMPD1-206ENST00000531336 PRR36Q9H6K5 1346 aa19.48■□□□□ 0.71
SMPD1-206ENST00000531336 SRPK2P78362 688 aaKnown RBP19.47■□□□□ 0.71
SMPD1-206ENST00000531336 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-206ENST00000531336 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
SMPD1-206ENST00000531336 HSPA1LP34931 641 aa19.44■□□□□ 0.7
SMPD1-206ENST00000531336 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMPD1-206ENST00000531336 NUDT16Q96DE0 195 aaKnown RBP19.44■□□□□ 0.7
SMPD1-206ENST00000531336 TESK2Q96S53 571 aa19.44■□□□□ 0.7
SMPD1-206ENST00000531336 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
SMPD1-206ENST00000531336 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
SMPD1-206ENST00000531336 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
SMPD1-206ENST00000531336 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
SMPD1-206ENST00000531336 DISP3Q9P2K9 1392 aa19.41■□□□□ 0.7
SMPD1-206ENST00000531336 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
SMPD1-206ENST00000531336 NPHP3Q7Z494 1330 aa19.39■□□□□ 0.69
SMPD1-206ENST00000531336 ATAD2Q6PL18 1390 aa19.39■□□□□ 0.69
SMPD1-206ENST00000531336 FOXO3O43524 673 aa19.38■□□□□ 0.69
SMPD1-206ENST00000531336 TMF1P82094 1093 aa19.38■□□□□ 0.69
SMPD1-206ENST00000531336 PXDNQ92626 1479 aa19.38■□□□□ 0.69
SMPD1-206ENST00000531336 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
SMPD1-206ENST00000531336 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-206ENST00000531336 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-206ENST00000531336 AKAP12Q02952 1782 aa19.36■□□□□ 0.69
SMPD1-206ENST00000531336 TRPM3Q9HCF6 1732 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-206ENST00000531336 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
SMPD1-206ENST00000531336 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
SMPD1-206ENST00000531336 SHPRHQ149N8 1683 aa19.34■□□□□ 0.69
SMPD1-206ENST00000531336 SOS2Q07890 1332 aaPredicted RBP19.33■□□□□ 0.69
SMPD1-206ENST00000531336 CABP1Q9NZU7 370 aa19.33■□□□□ 0.68
SMPD1-206ENST00000531336 MYOM1P52179 1685 aa19.33■□□□□ 0.68
SMPD1-206ENST00000531336 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-206ENST00000531336 ACEP12821 1306 aa19.32■□□□□ 0.68
SMPD1-206ENST00000531336 PLEKHG3A1L390 1219 aa19.32■□□□□ 0.68
SMPD1-206ENST00000531336 KRT28Q7Z3Y7 464 aa19.32■□□□□ 0.68
SMPD1-206ENST00000531336 PSME1Q06323 249 aa19.31■□□□□ 0.68
SMPD1-206ENST00000531336 MON2Q7Z3U7 1717 aa19.31■□□□□ 0.68
SMPD1-206ENST00000531336 CDCA8Q53HL2 280 aa19.3■□□□□ 0.68
SMPD1-206ENST00000531336 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
SMPD1-206ENST00000531336 PUS7Q96PZ0 661 aaKnown RBP19.3■□□□□ 0.68
SMPD1-206ENST00000531336 JCADQ9P266 1359 aa19.3■□□□□ 0.68
SMPD1-206ENST00000531336 TNS3Q68CZ2 1445 aa19.29■□□□□ 0.68
SMPD1-206ENST00000531336 POLR3GLQ9BT43 218 aa19.29■□□□□ 0.68
SMPD1-206ENST00000531336 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
SMPD1-206ENST00000531336 NRKQ7Z2Y5 1582 aa19.28■□□□□ 0.68
SMPD1-206ENST00000531336 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
SMPD1-206ENST00000531336 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-206ENST00000531336 SBNO1A3KN83 1393 aa19.27■□□□□ 0.68
SMPD1-206ENST00000531336 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
SMPD1-206ENST00000531336 NINLQ9Y2I6 1382 aa19.27■□□□□ 0.68
SMPD1-206ENST00000531336 USP6P35125 1406 aa19.26■□□□□ 0.67
SMPD1-206ENST00000531336 SLC12A5Q9H2X9 1139 aa19.26■□□□□ 0.67
SMPD1-206ENST00000531336 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
SMPD1-206ENST00000531336 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
SMPD1-206ENST00000531336 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-206ENST00000531336 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
SMPD1-206ENST00000531336 LMOD2Q6P5Q4 547 aa19.24■□□□□ 0.67
SMPD1-206ENST00000531336 ABCA3Q99758 1704 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms