RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 C14orf93Q9H972 538 aaKnown RBP32.81■■■□□ 2.84
TRAPPC4-210ENST00000531290 NHSL1Q5SYE7 1610 aa32.8■■■□□ 2.84
TRAPPC4-210ENST00000531290 SOS2Q07890 1332 aaPredicted RBP32.8■■■□□ 2.84
TRAPPC4-210ENST00000531290 TECPR2O15040 1411 aa32.79■■■□□ 2.84
TRAPPC4-210ENST00000531290 AFF2P51816 1311 aa32.77■■■□□ 2.84
TRAPPC4-210ENST00000531290 RXRBP28702 533 aa32.77■■■□□ 2.84
TRAPPC4-210ENST00000531290 C8orf37Q96NL8 207 aa32.77■■■□□ 2.84
TRAPPC4-210ENST00000531290 CFAP70Q5T0N1 1121 aa32.76■■■□□ 2.83
TRAPPC4-210ENST00000531290 YTHDC2Q9H6S0 1430 aaKnown RBP32.76■■■□□ 2.83
TRAPPC4-210ENST00000531290 NUTM2FA1L443 756 aa32.75■■■□□ 2.83
TRAPPC4-210ENST00000531290 SIRT1Q96EB6 747 aa32.75■■■□□ 2.83
TRAPPC4-210ENST00000531290 NPHP3Q7Z494 1330 aa32.75■■■□□ 2.83
TRAPPC4-210ENST00000531290 HRCP23327 699 aa32.74■■■□□ 2.83
TRAPPC4-210ENST00000531290 DHX57Q6P158 1386 aaKnown RBP32.73■■■□□ 2.83
TRAPPC4-210ENST00000531290 PLEKHH1Q9ULM0 1364 aa32.73■■■□□ 2.83
TRAPPC4-210ENST00000531290 ADAMTS2O95450 1211 aa32.73■■■□□ 2.83
TRAPPC4-210ENST00000531290 FOXO3O43524 673 aa32.71■■■□□ 2.83
TRAPPC4-210ENST00000531290 NGLY1Q96IV0 654 aa32.71■■■□□ 2.83
TRAPPC4-210ENST00000531290 CDC42BPGQ6DT37 1551 aa32.7■■■□□ 2.83
TRAPPC4-210ENST00000531290 IFT172Q9UG01 1749 aa32.69■■■□□ 2.82
TRAPPC4-210ENST00000531290 MYOM2P54296 1465 aa32.68■■■□□ 2.82
TRAPPC4-210ENST00000531290 NRXN1Q9ULB1 1477 aa32.67■■■□□ 2.82
TRAPPC4-210ENST00000531290 QTRT2Q9H974 415 aaKnown RBP32.66■■■□□ 2.82
TRAPPC4-210ENST00000531290 XPCQ01831 940 aaPredicted RBP32.65■■■□□ 2.82
TRAPPC4-210ENST00000531290 KDM2AQ9Y2K7 1162 aa32.65■■■□□ 2.82
TRAPPC4-210ENST00000531290 LAMC1P11047 1609 aa32.64■■■□□ 2.82
TRAPPC4-210ENST00000531290 DCAF11Q8TEB1 546 aa32.63■■■□□ 2.81
TRAPPC4-210ENST00000531290 PRAM1Q96QH2 718 aa32.63■■■□□ 2.81
TRAPPC4-210ENST00000531290 POGKQ9P215 609 aa32.62■■■□□ 2.81
TRAPPC4-210ENST00000531290 SAFB2Q14151 953 aaKnown RBP eCLIP32.61■■■□□ 2.81
TRAPPC4-210ENST00000531290 STAC3Q96MF2 364 aa32.6■■■□□ 2.81
TRAPPC4-210ENST00000531290 RBM6P78332 1123 aaKnown RBP32.59■■■□□ 2.81
TRAPPC4-210ENST00000531290 USP21Q9UK80 565 aa32.57■■■□□ 2.8
TRAPPC4-210ENST00000531290 KNDC1Q76NI1 1749 aa32.57■■■□□ 2.8
TRAPPC4-210ENST00000531290 PXDNQ92626 1479 aa32.55■■■□□ 2.8
TRAPPC4-210ENST00000531290 KRT28Q7Z3Y7 464 aa32.54■■■□□ 2.8
TRAPPC4-210ENST00000531290 PHF8Q9UPP1 1060 aa32.54■■■□□ 2.8
TRAPPC4-210ENST00000531290 TRAK1Q9UPV9 953 aa32.54■■■□□ 2.8
TRAPPC4-210ENST00000531290 CDK12Q9NYV4 1490 aaPredicted RBP32.54■■■□□ 2.8
TRAPPC4-210ENST00000531290 FNBP4Q8N3X1 1017 aaPredicted RBP32.53■■■□□ 2.8
TRAPPC4-210ENST00000531290 UPF1Q92900 1129 aaKnown RBP eCLIP32.52■■■□□ 2.8
TRAPPC4-210ENST00000531290 PSME1Q06323 249 aa32.5■■■□□ 2.79
TRAPPC4-210ENST00000531290 TRPC5Q9UL62 973 aaPredicted RBP32.5■■■□□ 2.79
TRAPPC4-210ENST00000531290 SPATA31A3Q5VYP0 1347 aa32.5■■■□□ 2.79
TRAPPC4-210ENST00000531290 DLC1Q96QB1 1528 aa32.46■■■□□ 2.79
TRAPPC4-210ENST00000531290 FMN2Q9NZ56 1722 aa32.44■■■□□ 2.78
TRAPPC4-210ENST00000531290 HIRIP3Q9BW71 556 aaPredicted RBP32.44■■■□□ 2.78
TRAPPC4-210ENST00000531290 COL22A1Q8NFW1 1626 aaPredicted RBP32.43■■■□□ 2.78
TRAPPC4-210ENST00000531290 ADGRB1O14514 1584 aa32.42■■■□□ 2.78
TRAPPC4-210ENST00000531290 MINK1Q8N4C8 1332 aaPredicted RBP32.42■■■□□ 2.78
TRAPPC4-210ENST00000531290 PMFBP1Q8TBY8 1022 aa32.41■■■□□ 2.78
TRAPPC4-210ENST00000531290 RGS12O14924 1447 aa32.41■■■□□ 2.78
TRAPPC4-210ENST00000531290 HAP1P54257 671 aaPredicted RBP32.4■■■□□ 2.78
TRAPPC4-210ENST00000531290 LMOD2Q6P5Q4 547 aa32.39■■■□□ 2.78
TRAPPC4-210ENST00000531290 KIF1AQ12756 1690 aa32.38■■■□□ 2.77
TRAPPC4-210ENST00000531290 ANKARQ7Z5J8 1434 aa32.38■■■□□ 2.77
TRAPPC4-210ENST00000531290 WASLO00401 505 aaPredicted RBP32.36■■■□□ 2.77
TRAPPC4-210ENST00000531290 SBNO1A3KN83 1393 aa32.35■■■□□ 2.77
TRAPPC4-210ENST00000531290 EIF3AQ14152 1382 aaKnown RBP32.35■■■□□ 2.77
TRAPPC4-210ENST00000531290 PLEKHG5O94827 1062 aa32.35■■■□□ 2.77
TRAPPC4-210ENST00000531290 ATRNO75882 1429 aa32.34■■■□□ 2.77
TRAPPC4-210ENST00000531290 TNS3Q68CZ2 1445 aa32.34■■■□□ 2.77
TRAPPC4-210ENST00000531290 BCL9LQ86UU0 1499 aa32.33■■■□□ 2.77
TRAPPC4-210ENST00000531290 CABLES1Q8TDN4 633 aa32.32■■■□□ 2.76
TRAPPC4-210ENST00000531290 UNC5CLQ8IV45 518 aa32.31■■■□□ 2.76
TRAPPC4-210ENST00000531290 GJD4Q96KN9 370 aaPredicted RBP32.31■■■□□ 2.76
TRAPPC4-210ENST00000531290 ARHGEF10O15013 1369 aa32.31■■■□□ 2.76
TRAPPC4-210ENST00000531290 GPRASP1Q5JY77 1395 aa32.29■■■□□ 2.76
TRAPPC4-210ENST00000531290 PRR36Q9H6K5 1346 aa32.28■■■□□ 2.76
TRAPPC4-210ENST00000531290 NGDNQ8NEJ9 315 aaKnown RBP32.27■■■□□ 2.76
TRAPPC4-210ENST00000531290 ADGRB2O60241 1585 aa32.27■■■□□ 2.76
TRAPPC4-210ENST00000531290 ATAD2Q6PL18 1390 aa32.26■■■□□ 2.75
TRAPPC4-210ENST00000531290 SLIT2O94813 1529 aa32.21■■■□□ 2.75
TRAPPC4-210ENST00000531290 TULP4Q9NRJ4 1543 aa32.21■■■□□ 2.75
TRAPPC4-210ENST00000531290 NUDT16Q96DE0 195 aaKnown RBP32.21■■■□□ 2.75
TRAPPC4-210ENST00000531290 RGPD8O14715 1765 aaPredicted RBP32.19■■■□□ 2.74
TRAPPC4-210ENST00000531290 USP32Q8NFA0 1604 aa32.19■■■□□ 2.74
TRAPPC4-210ENST00000531290 PAK3O75914 559 aaPredicted RBP32.19■■■□□ 2.74
TRAPPC4-210ENST00000531290 NBPF1Q3BBV0 1214 aa32.19■■■□□ 2.74
TRAPPC4-210ENST00000531290 CDK19Q9BWU1 502 aa32.19■■■□□ 2.74
TRAPPC4-210ENST00000531290 FAM83GA6ND36 823 aa32.16■■■□□ 2.74
TRAPPC4-210ENST00000531290 CCDC9Q9Y3X0 531 aaKnown RBP32.16■■■□□ 2.74
TRAPPC4-210ENST00000531290 VPS72Q15906 364 aa32.15■■■□□ 2.74
TRAPPC4-210ENST00000531290 RALGAPBQ86X10 1494 aa32.13■■■□□ 2.73
TRAPPC4-210ENST00000531290 MARF1Q9Y4F3 1742 aaKnown RBP32.12■■■□□ 2.73
TRAPPC4-210ENST00000531290 L3MBTL2Q969R5 705 aa32.11■■■□□ 2.73
TRAPPC4-210ENST00000531290 CCDC61Q9Y6R9 512 aa32.11■■■□□ 2.73
TRAPPC4-210ENST00000531290 CCDC125Q86Z20 511 aa32.08■■■□□ 2.73
TRAPPC4-210ENST00000531290 SIN3AQ96ST3 1273 aa32.07■■■□□ 2.72
TRAPPC4-210ENST00000531290 ATP7BP35670 1465 aa32.07■■■□□ 2.72
TRAPPC4-210ENST00000531290 NEUROD1Q13562 356 aa32.06■■■□□ 2.72
TRAPPC4-210ENST00000531290 SEPT12Q8IYM1 358 aa32.06■■■□□ 2.72
TRAPPC4-210ENST00000531290 BTG4Q9NY30 223 aa32.06■■■□□ 2.72
TRAPPC4-210ENST00000531290 ARHGEF28Q8N1W1 1705 aaKnown RBP32.06■■■□□ 2.72
TRAPPC4-210ENST00000531290 CENPJQ9HC77 1338 aaPredicted RBP32.05■■■□□ 2.72
TRAPPC4-210ENST00000531290 NBPF8Q3BBV2 869 aa32.05■■■□□ 2.72
TRAPPC4-210ENST00000531290 ACEP12821 1306 aa32.04■■■□□ 2.72
TRAPPC4-210ENST00000531290 SRPK2P78362 688 aaKnown RBP32.04■■■□□ 2.72
TRAPPC4-210ENST00000531290 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.03■■■□□ 2.72
TRAPPC4-210ENST00000531290 PLEKHG3A1L390 1219 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms