RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
FGFR1-236ENST00000531196 MYOM2P54296 1465 aa16.04■□□□□ 0.16
FGFR1-236ENST00000531196 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
FGFR1-236ENST00000531196 ABCC11Q96J66 1382 aa16.04■□□□□ 0.16
FGFR1-236ENST00000531196 WAPLQ7Z5K2 1190 aa16.04■□□□□ 0.16
FGFR1-236ENST00000531196 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
FGFR1-236ENST00000531196 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
FGFR1-236ENST00000531196 LAMC1P11047 1609 aa16.02■□□□□ 0.16
FGFR1-236ENST00000531196 NUTM2FA1L443 756 aa16.02■□□□□ 0.16
FGFR1-236ENST00000531196 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
FGFR1-236ENST00000531196 PLEKHH1Q9ULM0 1364 aa16.01■□□□□ 0.15
FGFR1-236ENST00000531196 C8orf37Q96NL8 207 aa16.01■□□□□ 0.15
FGFR1-236ENST00000531196 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
FGFR1-236ENST00000531196 AFF2P51816 1311 aa16■□□□□ 0.15
FGFR1-236ENST00000531196 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
FGFR1-236ENST00000531196 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
FGFR1-236ENST00000531196 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
FGFR1-236ENST00000531196 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
FGFR1-236ENST00000531196 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
FGFR1-236ENST00000531196 RXRBP28702 533 aa15.97■□□□□ 0.15
FGFR1-236ENST00000531196 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
FGFR1-236ENST00000531196 FOXO3O43524 673 aa15.96■□□□□ 0.15
FGFR1-236ENST00000531196 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.15
FGFR1-236ENST00000531196 NGLY1Q96IV0 654 aa15.96■□□□□ 0.15
FGFR1-236ENST00000531196 POGKQ9P215 609 aa15.96■□□□□ 0.15
FGFR1-236ENST00000531196 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
FGFR1-236ENST00000531196 FMN2Q9NZ56 1722 aa15.95■□□□□ 0.14
FGFR1-236ENST00000531196 HRCP23327 699 aa15.95■□□□□ 0.14
FGFR1-236ENST00000531196 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
FGFR1-236ENST00000531196 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
FGFR1-236ENST00000531196 PRAM1Q96QH2 718 aa15.95■□□□□ 0.14
FGFR1-236ENST00000531196 PXDNQ92626 1479 aa15.94■□□□□ 0.14
FGFR1-236ENST00000531196 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
FGFR1-236ENST00000531196 DLC1Q96QB1 1528 aa15.93■□□□□ 0.14
FGFR1-236ENST00000531196 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
FGFR1-236ENST00000531196 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
FGFR1-236ENST00000531196 ADGRB1O14514 1584 aa15.91■□□□□ 0.14
FGFR1-236ENST00000531196 CDK12Q9NYV4 1490 aaPredicted RBP15.91■□□□□ 0.14
FGFR1-236ENST00000531196 QTRT2Q9H974 415 aaKnown RBP15.9■□□□□ 0.14
FGFR1-236ENST00000531196 USP21Q9UK80 565 aa15.9■□□□□ 0.14
FGFR1-236ENST00000531196 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.13
FGFR1-236ENST00000531196 STAC3Q96MF2 364 aa15.89■□□□□ 0.13
FGFR1-236ENST00000531196 PHF8Q9UPP1 1060 aa15.89■□□□□ 0.13
FGFR1-236ENST00000531196 HAP1P54257 671 aaPredicted RBP15.88■□□□□ 0.13
FGFR1-236ENST00000531196 MINK1Q8N4C8 1332 aaPredicted RBP15.88■□□□□ 0.13
FGFR1-236ENST00000531196 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
FGFR1-236ENST00000531196 KRT28Q7Z3Y7 464 aa15.87■□□□□ 0.13
FGFR1-236ENST00000531196 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
FGFR1-236ENST00000531196 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
FGFR1-236ENST00000531196 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
FGFR1-236ENST00000531196 RGS12O14924 1447 aa15.86■□□□□ 0.13
FGFR1-236ENST00000531196 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
FGFR1-236ENST00000531196 PSME1Q06323 249 aa15.86■□□□□ 0.13
FGFR1-236ENST00000531196 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
FGFR1-236ENST00000531196 SPATA31A3Q5VYP0 1347 aa15.86■□□□□ 0.13
FGFR1-236ENST00000531196 PLEKHG5O94827 1062 aa15.85■□□□□ 0.13
FGFR1-236ENST00000531196 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
FGFR1-236ENST00000531196 PMFBP1Q8TBY8 1022 aa15.84■□□□□ 0.13
FGFR1-236ENST00000531196 FNBP4Q8N3X1 1017 aaPredicted RBP15.83■□□□□ 0.12
FGFR1-236ENST00000531196 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
FGFR1-236ENST00000531196 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.123e-8■■■■□ 19.9
FGFR1-236ENST00000531196 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
FGFR1-236ENST00000531196 SBNO1A3KN83 1393 aa15.81■□□□□ 0.12
FGFR1-236ENST00000531196 ATRNO75882 1429 aa15.81■□□□□ 0.12
FGFR1-236ENST00000531196 GPRASP1Q5JY77 1395 aa15.81■□□□□ 0.12
FGFR1-236ENST00000531196 TULP4Q9NRJ4 1543 aa15.81■□□□□ 0.12
FGFR1-236ENST00000531196 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
FGFR1-236ENST00000531196 USP32Q8NFA0 1604 aa15.8■□□□□ 0.12
FGFR1-236ENST00000531196 WASLO00401 505 aaPredicted RBP15.8■□□□□ 0.12
FGFR1-236ENST00000531196 ARHGEF28Q8N1W1 1705 aaKnown RBP15.79■□□□□ 0.12
FGFR1-236ENST00000531196 ATAD2Q6PL18 1390 aa15.78■□□□□ 0.12
FGFR1-236ENST00000531196 NGDNQ8NEJ9 315 aaKnown RBP15.78■□□□□ 0.12
FGFR1-236ENST00000531196 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
FGFR1-236ENST00000531196 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
FGFR1-236ENST00000531196 PRR36Q9H6K5 1346 aa15.77■□□□□ 0.12
FGFR1-236ENST00000531196 UNC5CLQ8IV45 518 aa15.76■□□□□ 0.11
FGFR1-236ENST00000531196 KIAA1210Q9ULL0 1709 aa15.75■□□□□ 0.11
FGFR1-236ENST00000531196 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
FGFR1-236ENST00000531196 GJD4Q96KN9 370 aaPredicted RBP15.75■□□□□ 0.11
FGFR1-236ENST00000531196 SLIT2O94813 1529 aa15.74■□□□□ 0.11
FGFR1-236ENST00000531196 ATP7BP35670 1465 aa15.74■□□□□ 0.11
FGFR1-236ENST00000531196 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
FGFR1-236ENST00000531196 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
FGFR1-236ENST00000531196 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.74■□□□□ 0.11
FGFR1-236ENST00000531196 NUDT16Q96DE0 195 aaKnown RBP15.73■□□□□ 0.11
FGFR1-236ENST00000531196 ABCA3Q99758 1704 aa15.73■□□□□ 0.11
FGFR1-236ENST00000531196 NBPF1Q3BBV0 1214 aa15.72■□□□□ 0.11
FGFR1-236ENST00000531196 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
FGFR1-236ENST00000531196 RALGAPBQ86X10 1494 aa15.71■□□□□ 0.11
FGFR1-236ENST00000531196 TRPM3Q9HCF6 1732 aaPredicted RBP15.71■□□□□ 0.11
FGFR1-236ENST00000531196 PLCH1Q4KWH8 1693 aa15.71■□□□□ 0.11
FGFR1-236ENST00000531196 CENPJQ9HC77 1338 aaPredicted RBP15.7■□□□□ 0.1
FGFR1-236ENST00000531196 NEUROD1Q13562 356 aa15.7■□□□□ 0.1
FGFR1-236ENST00000531196 SRPK2P78362 688 aaKnown RBP15.69■□□□□ 0.1
FGFR1-236ENST00000531196 L3MBTL2Q969R5 705 aa15.69■□□□□ 0.1
FGFR1-236ENST00000531196 GLI3P10071 1580 aa15.69■□□□□ 0.1
FGFR1-236ENST00000531196 ALS2Q96Q42 1657 aa15.69■□□□□ 0.1
FGFR1-236ENST00000531196 A0A0G2JS52 829 aa15.68■□□□□ 0.1
FGFR1-236ENST00000531196 MYT1Q01538 1121 aa15.68■□□□□ 0.1
FGFR1-236ENST00000531196 VPS72Q15906 364 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms