RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
CTNND1-228ENST00000531007 EIF3AQ14152 1382 aaKnown RBP13.8□□□□□ -0.2
CTNND1-228ENST00000531007 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
CTNND1-228ENST00000531007 SCAF11Q99590 1463 aaKnown RBP13.79□□□□□ -0.2
CTNND1-228ENST00000531007 RIMS1Q86UR5 1692 aaKnown RBP13.79□□□□□ -0.2
CTNND1-228ENST00000531007 RIMS2Q9UQ26 1411 aa13.78□□□□□ -0.2
CTNND1-228ENST00000531007 PTPRMP28827 1452 aa13.78□□□□□ -0.2
CTNND1-228ENST00000531007 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
CTNND1-228ENST00000531007 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
CTNND1-228ENST00000531007 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
CTNND1-228ENST00000531007 MYO5BQ9ULV0 1848 aa13.77□□□□□ -0.21
CTNND1-228ENST00000531007 SETD1BQ9UPS6 1966 aaKnown RBP13.76□□□□□ -0.21
CTNND1-228ENST00000531007 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
CTNND1-228ENST00000531007 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
CTNND1-228ENST00000531007 NBPF1Q3BBV0 1214 aa13.76□□□□□ -0.21
CTNND1-228ENST00000531007 CEBPAP49715 358 aaPredicted RBP13.75□□□□□ -0.21
CTNND1-228ENST00000531007 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
CTNND1-228ENST00000531007 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
CTNND1-228ENST00000531007 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
CTNND1-228ENST00000531007 SLIT1O75093 1534 aa13.74□□□□□ -0.21
CTNND1-228ENST00000531007 CFAP70Q5T0N1 1121 aa13.74□□□□□ -0.21
CTNND1-228ENST00000531007 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
CTNND1-228ENST00000531007 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
CTNND1-228ENST00000531007 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
CTNND1-228ENST00000531007 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
CTNND1-228ENST00000531007 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
CTNND1-228ENST00000531007 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
CTNND1-228ENST00000531007 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
CTNND1-228ENST00000531007 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
CTNND1-228ENST00000531007 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
CTNND1-228ENST00000531007 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
CTNND1-228ENST00000531007 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
CTNND1-228ENST00000531007 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
CTNND1-228ENST00000531007 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
CTNND1-228ENST00000531007 CCDC7Q96M83 1385 aa13.71□□□□□ -0.22
CTNND1-228ENST00000531007 PLEKHG1Q9ULL1 1385 aa13.7□□□□□ -0.22
CTNND1-228ENST00000531007 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
CTNND1-228ENST00000531007 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
CTNND1-228ENST00000531007 TMF1P82094 1093 aa13.69□□□□□ -0.22
CTNND1-228ENST00000531007 HIRIP3Q9BW71 556 aaPredicted RBP13.69□□□□□ -0.22
CTNND1-228ENST00000531007 GSE1Q14687 1217 aa13.68□□□□□ -0.22
CTNND1-228ENST00000531007 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
CTNND1-228ENST00000531007 TESK2Q96S53 571 aa13.67□□□□□ -0.22
CTNND1-228ENST00000531007 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
CTNND1-228ENST00000531007 MAP3K13O43283 966 aa13.66□□□□□ -0.22
CTNND1-228ENST00000531007 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
CTNND1-228ENST00000531007 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
CTNND1-228ENST00000531007 CENPJQ9HC77 1338 aaPredicted RBP13.65□□□□□ -0.22
CTNND1-228ENST00000531007 DLC1Q96QB1 1528 aa13.65□□□□□ -0.22
CTNND1-228ENST00000531007 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
CTNND1-228ENST00000531007 NUTM2DQ5VT03 806 aaPredicted RBP13.65□□□□□ -0.22
CTNND1-228ENST00000531007 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.22
CTNND1-228ENST00000531007 LRPPRCP42704 1394 aaKnown RBP13.65□□□□□ -0.22
CTNND1-228ENST00000531007 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
CTNND1-228ENST00000531007 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
CTNND1-228ENST00000531007 DDX10Q13206 875 aaKnown RBP13.64□□□□□ -0.23
CTNND1-228ENST00000531007 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
CTNND1-228ENST00000531007 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
CTNND1-228ENST00000531007 ANKLE2Q86XL3 938 aa13.63□□□□□ -0.23
CTNND1-228ENST00000531007 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
CTNND1-228ENST00000531007 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
CTNND1-228ENST00000531007 MED14O60244 1454 aa13.62□□□□□ -0.23
CTNND1-228ENST00000531007 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
CTNND1-228ENST00000531007 C11orf95C9JLR9 678 aaPredicted RBP13.62□□□□□ -0.23
CTNND1-228ENST00000531007 ASXL1Q8IXJ9 1541 aa13.62□□□□□ -0.23
CTNND1-228ENST00000531007 TECPR2O15040 1411 aa13.62□□□□□ -0.23
CTNND1-228ENST00000531007 LTKP29376 864 aa13.61□□□□□ -0.23
CTNND1-228ENST00000531007 TMEM132EQ6IEE7 984 aa13.61□□□□□ -0.23
CTNND1-228ENST00000531007 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
CTNND1-228ENST00000531007 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
CTNND1-228ENST00000531007 ADAMTS13Q76LX8 1427 aa13.61□□□□□ -0.23
CTNND1-228ENST00000531007 KNDC1Q76NI1 1749 aa13.61□□□□□ -0.23
CTNND1-228ENST00000531007 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
CTNND1-228ENST00000531007 BCANQ96GW7 911 aa13.6□□□□□ -0.23
CTNND1-228ENST00000531007 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
CTNND1-228ENST00000531007 HSPA2P54652 639 aa13.59□□□□□ -0.23
CTNND1-228ENST00000531007 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
CTNND1-228ENST00000531007 QRICH2Q9H0J4 1663 aa13.58□□□□□ -0.24
CTNND1-228ENST00000531007 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
CTNND1-228ENST00000531007 ANP32CO43423 234 aa13.57□□□□□ -0.24
CTNND1-228ENST00000531007 PYGBP11216 843 aa13.57□□□□□ -0.24
CTNND1-228ENST00000531007 POGKQ9P215 609 aa13.57□□□□□ -0.24
CTNND1-228ENST00000531007 CPS1P31327 1500 aa13.57□□□□□ -0.24
CTNND1-228ENST00000531007 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
CTNND1-228ENST00000531007 METP08581 1390 aa13.56□□□□□ -0.24
CTNND1-228ENST00000531007 KTN1Q86UP2 1357 aaKnown RBP13.56□□□□□ -0.24
CTNND1-228ENST00000531007 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
CTNND1-228ENST00000531007 STK26Q9P289 416 aa13.55□□□□□ -0.24
CTNND1-228ENST00000531007 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-228ENST00000531007 PTCH1Q13635 1447 aa13.55□□□□□ -0.24
CTNND1-228ENST00000531007 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
CTNND1-228ENST00000531007 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
CTNND1-228ENST00000531007 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
CTNND1-228ENST00000531007 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
CTNND1-228ENST00000531007 TIE1P35590 1138 aa13.52□□□□□ -0.25
CTNND1-228ENST00000531007 POLR3GLQ9BT43 218 aa13.52□□□□□ -0.25
CTNND1-228ENST00000531007 ATAD2Q6PL18 1390 aa13.52□□□□□ -0.25
CTNND1-228ENST00000531007 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
CTNND1-228ENST00000531007 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
CTNND1-228ENST00000531007 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 264.3 ms